Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1759892	1760062	171	2 [1]	[1] 2	[USA300HOU_RS08785]	[USA300HOU_RS08785]

GCACGAGAACCCCGATAATAATAAATAGAGTCACTATTTTTCCTCCAATGAAAGTACTTCGTAGGTATTATACACAAGATACGTCATTAATTCTATCAACTTCAATCATTTTCATCAAAGTAACCCGCTTCTACAAGACTGGTAAATCTATTATCACCGATTATAATATGATCCAATAAATCTATC  >  USA300TCH1516_ALE/1760018‑1760203                                              |                                                                                                                                             gCACGAGAACCCCGATAATAATAAATAGAGTCACTATTTTTCCTCCAATGAAAGTACTTCGTAGGTATTATACACAAGATACGTCATTAATTCTATCAACTTCAATCATTTTCATCAAAGTAACCCGCTTCTACAAGACTg                                               >  1:22090/1‑141 (MQ=255)                                              cAATGAAAGTACTTCGTAGGTATTATACACAAGATACGTCATTAATTCTATCAACTTCAATCATTTTCATCAAAGTAACCCGCTTCTACAAGACTGGTAAATCTATTATCACCGATTATAATATGATCCAATAAATCTATc  >  2:40528/1‑141 (MQ=255)                                              |                                                                                                                                             GCACGAGAACCCCGATAATAATAAATAGAGTCACTATTTTTCCTCCAATGAAAGTACTTCGTAGGTATTATACACAAGATACGTCATTAATTCTATCAACTTCAATCATTTTCATCAAAGTAACCCGCTTCTACAAGACTGGTAAATCTATTATCACCGATTATAATATGATCCAATAAATCTATC  >  USA300TCH1516_ALE/1760018‑1760203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑