Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 2020927 2021071 145 2 [1] [1] 2 queE_2 7‑carboxy‑7‑deazaguanine synthase

ATATATTGGATTTCAGAGATGAAGATATTTGGATGTTATTTGGTACTTTGCCTGTGTTTCCATGCTTAAAGGATGATGAAGATCAAAAGTTACTATCACGTTTAAGAAATGCTAAAAATGTAACGACTAGAAATGACCCGGATGGCCGTAGTCGTTTAAATGTCAATGTATTTACAGGTAATGTAATCGTAAC  >  USA300TCH1516_ALE/2021020‑2021212
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atatatTGGATTTCAGAGATGAAGATATTTGGATGTTATTTGGTACTTTGCCTGTGTTTCCATGCTTAAAGGATGATGAAGATCAAAAGTTACTATCACGTTTAAGAAATGCTAAAAATGTAACGACTAGAAATGACCCgg                                                      <  1:54898/141‑1 (MQ=255)
                                                    tgtgTTTCCATGCTTAAAGGATGATGAAGATCAAAAGTTACTATCACGTTTAAGAAATGCTAAAAATGTAACGACTAGAAATGACCCGGATGGCCGTAGTCGTTTAAATGTCAATGTATTTACAGGTAATGTAATCGTAAc  <  2:63604/141‑1 (MQ=255)
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ATATATTGGATTTCAGAGATGAAGATATTTGGATGTTATTTGGTACTTTGCCTGTGTTTCCATGCTTAAAGGATGATGAAGATCAAAAGTTACTATCACGTTTAAGAAATGCTAAAAATGTAACGACTAGAAATGACCCGGATGGCCGTAGTCGTTTAAATGTCAATGTATTTACAGGTAATGTAATCGTAAC  >  USA300TCH1516_ALE/2021020‑2021212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: