Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2508087	2508170	84	2 [1]	[1] 2	USA300TCH1516_02393	Acid shock protein

AGGTGTAAATAAAGAAGATATTAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACTAGAAGCGCAAAATACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAATGCGTCAATTTGATTTTGAAGCTGTTGATAAGCAAC  >  USA300TCH1516_ALE/2508151‑2508311                     |                                                                                                                                             aGGTGTAAATAAAGAAGATATTAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACTAGAAGCGCAAAATACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAATGCGTCAATTTGAttt                      >  2:29944/1‑141 (MQ=255)                     ttAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACTAGAAGCGCAAAATACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAATGCGTCAATTTGATTTTGAAGCTGTTGATAAGCAAc  >  2:22368/1‑141 (MQ=255)                     |                                                                                                                                             AGGTGTAAATAAAGAAGATATTAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACTAGAAGCGCAAAATACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAATGCGTCAATTTGATTTTGAAGCTGTTGATAAGCAAC  >  USA300TCH1516_ALE/2508151‑2508311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑