Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2527466	2527499	34	2 [1]	[1] 2	[USA300TCH1516_02411]	[USA300TCH1516_02411]

TGTAAACCATATGCAAATACACTGTAACCAATTGCAGTACGTAAAATAAACCTTATAACTTTATTAGGTACACATTTTGACGTTACTGAAATAGAAGATAGTAGTGTTGTGAAAATATATAATATTAAAACTTTGATATAAC  >  USA300TCH1516_ALE/2527499‑2527640  |                                                                                                                                             tGTAAACCATATGCAAATACACTGTAACCAATTGCAGTACGTAAAATAAACCTCATAACTTTATTAGGTACACATTTTGACGTTACTGAAATAGAAGATAGTAGTGTTGTGAAAATATATAATATTAAAACTTTGATATaa   >  1:33053/1‑141 (MQ=255)  gTAAACCATATGCAAATACACTGTAACCAATTGCAGTACGTAAAATAAACCTTATAACTTTATTAGGTACACATTTTGACGTTACTGAAATAGAAGATAGTAGTGTTGTGAAAATATATAATATTAAAACTTTGATATAAc  <  2:28955/141‑1 (MQ=255)  |                                                                                                                                             TGTAAACCATATGCAAATACACTGTAACCAATTGCAGTACGTAAAATAAACCTTATAACTTTATTAGGTACACATTTTGACGTTACTGAAATAGAAGATAGTAGTGTTGTGAAAATATATAATATTAAAACTTTGATATAAC  >  USA300TCH1516_ALE/2527499‑2527640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑