Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2633610	2633644	35	2 [1]	[1] 2	fnbA_2	Fibronectin‑binding protein A

GATATTGCCACCTTGTTCATATTTAGGTTTGTCTTCTTCTGTGTCTTCCTCGAATGACTGGTTACCGCTATTTTGGCCACCTTCATAACCTAATTCACTCTTAATATCAACGTGGCTATTTTCTTCGATTTCTTCAATCACGTCATAA  >  USA300TCH1516_ALE/2633638‑2633785        |                                                                                                                                             gATATTGCCACCTTGTTCATATTTAGGTTTGTCTTCTTCTGTGTCTTCCTCGAATGACTGGTTACCGCTATTTTGGCCACCTTCATAACCTAATTCACTCTTAATATCAACGTGGCTATTTTCTTCGATTTCTTCAATCAc         <  1:47614/141‑1 (MQ=255)        ccACCTTGTTCATATTTAGGTTTGTCTTCTTCTGTGTCTTCCTCGAATGACTGGTTACCGCTATTTTGGCCACCTTCATAACCTAATTCACTCTTAATATCAACGTGGCTATTTTCTTCGATTTCTTCAATCACGTCATaa  <  1:25560/141‑1 (MQ=255)        |                                                                                                                                             GATATTGCCACCTTGTTCATATTTAGGTTTGTCTTCTTCTGTGTCTTCCTCGAATGACTGGTTACCGCTATTTTGGCCACCTTCATAACCTAATTCACTCTTAATATCAACGTGGCTATTTTCTTCGATTTCTTCAATCACGTCATAA  >  USA300TCH1516_ALE/2633638‑2633785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑