Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	480294	480437	144	2 [1]	[1] 2	USA300HOU_RS02280	hypothetical protein

CAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATGTCATCGATGTTTTACACATTTAAATTGATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAATTAAGTGGGCCATTTTTAAGCTTAAGTACCATTGTCAATTCGATT  >  USA300TCH1516_ALE/480421‑480578                  |                                                                                                                                             cAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATGTCATCGATTTTTTACACATTTAAATTGATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAATTAAGTGGGCCATTTTTAAGCTTAAGTa                   <  1:58054/141‑1 (MQ=255)                  aaTGTTTATCGACAACAGCAACAGACAATGTCATCGATGTTTTACACATTTAAATTGATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAATTAAGTGGGCCATTTTTAAGCTTAAGTACCATTGTCAATTCGAtt  <  1:26743/141‑1 (MQ=255)                  |                                                                                                                                             CAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATGTCATCGATGTTTTACACATTTAAATTGATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAATTAAGTGGGCCATTTTTAAGCTTAAGTACCATTGTCAATTCGATT  >  USA300TCH1516_ALE/480421‑480578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑