Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 655702 655803 102 2 [1] [1] 2 USA300HOU_RS03130 hypothetical protein

TCATTCAAGAATCTTTGCTTTGTACTATTTTCTTATTTTTTCTGTGGTGGATTATCAATCATGTTCTTAGATGTTTTGATTAGTTTATCTATCCAAAATATTATAGTATTTATTGCTTGGGTTATTATGACAATGCTATTTTTCTTTATAAATATGTCTTCAATAATAGACAAAAAG  >  USA300TCH1516_ALE/655768‑655944
                                    |                                                                                                                                            
tcatTCAAGAATCTTTGCTTTGTACTATTTTCTTATTTTTTCTGTGGTGGATTATCAATCATGTTCTTAGATGTTTTGATTAGTTTATCTATCCAAAATATTATAGTATTTATTGCTTGGGTTATTATGACAATGCTAttt                                      >  1:1563/1‑141 (MQ=255)
                                    tttttCTGTGGTGGATTATCAATCATGTTCTTAGATGTTTTGATTAGTTTATCTATCCAAAATATTATAGTATTTATTGCTTGGGTTATTATGACAATGCTATTTTTCTTTATAAATATGTCTTCAATAATAGACAAAAAg  <  1:60228/141‑1 (MQ=255)
                                    |                                                                                                                                            
TCATTCAAGAATCTTTGCTTTGTACTATTTTCTTATTTTTTCTGTGGTGGATTATCAATCATGTTCTTAGATGTTTTGATTAGTTTATCTATCCAAAATATTATAGTATTTATTGCTTGGGTTATTATGACAATGCTATTTTTCTTTATAAATATGTCTTCAATAATAGACAAAAAG  >  USA300TCH1516_ALE/655768‑655944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: