| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 800928 | 76 (0.900) | 8 (0.100) | 5/246 | NT | 9.5% | intergenic (+62/‑289) | hisC_1/USA300HOU_RS03915 | Histidinol‑phosphate aminotransferase/Putative 5'(3')‑deoxyribonucleotidase |
| ? | USA300TCH1516_ALE | 801948 = | 80 (1.000) | intergenic (+189/+435) | USA300HOU_RS03915/USA300HOU_RS03920 | Putative 5'(3')‑deoxyribonucleotidase/Putative lipid kinase | |||||
AAGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCA > USA300TCH1516_ALE/801810‑802086 | aaGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATa < 1:208905/141‑1 (MQ=255)aaGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGAAAATGCAAGTTGGGGTGGGCCCCAACATa < 1:810773/141‑1 (MQ=255) tAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg > 1:1027607/1‑141 (MQ=255) tAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg > 2:962291/1‑141 (MQ=255) tgtgACTGAGCTGAACTTATATGTCTTAGACACTACAACACTATATTGGCAGTACTTGACTGCGGCGCCCCAACATAGAGAGATTGGAACGCCAACTTCCACAGCCAATGCAAGACGAGGTGGCCCCCAACCTACACaaac > 2:243055/1‑140 (MQ=255) gACTGTGATAAACTTTTATGTCTTAAACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACt < 1:133864/141‑1 (MQ=255) acaattggttttaaagaacaaaatgataaaatgttagaagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgtaaaatttatttcgtcgtcccaccccaacATAAAGAAATACt < 2:736599‑M2/13‑1 (MQ=255) acaattggttttaaagaacaaaatgataaaatgttagaagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACt < 2:396171‑M2/13‑1 (MQ=255) acaattggttttaaagaacaaaatgagaaaatgtgagaagttttatcaaactttaaatacgaatagtaagtggtgagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACt < 2:466442‑M2/13‑1 (MQ=255) aCTGAGATGAACTTTTATGTCTTAGACACTACAGCACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGGGGGCCCCAACAGAAAGCAAtcatt > 1:269362/1‑137 (MQ=25) aCTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAAAATAAAGAAATACtt > 1:478415/1‑141 (MQ=255) gagaTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACttttt > 1:491289/1‑141 (MQ=255) aTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt < 1:982914/141‑1 (MQ=255) aTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt < 1:415617/141‑1 (MQ=255) cTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACCTAAAGAAATACTTTTTCTTTAGaa > 2:395627/1‑141 (MQ=255) ttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTAGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑tt > 2:356186/1‑141 (MQ=255) aTGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAg > 1:571931/1‑141 (MQ=255) tggcTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAACGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGt < 1:507055/138‑1 (MQ=255) tGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTTTGGTTGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGt < 1:599035/141‑1 (MQ=255) tGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGt > 1:255615/1‑141 (MQ=255) tGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCACCAACATAGACGGATTTGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGt > 1:920418/1‑141 (MQ=21) tGTCTGAGACACTACAACACTATAGTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGt < 2:342460/141‑1 (MQ=255) ttCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTa < 1:833114/140‑1 (MQ=255) gtattAGATACTACAACACTATATTGGTAGTAGTTGACTGCGGGGCCCCAACAGAGAGAAATTGGAACGCCAATTTCTAGAGACAATGCAAGTTGGGGTGGGCCCCATCATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTa < 2:757793/138‑1 (MQ=18) gTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTa < 1:637089/141‑1 (MQ=255) tCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTAt > 1:53332/1‑141 (MQ=255) ttAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTAttt < 2:438224/141‑1 (MQ=255) cacTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTAt > 1:987747/1‑141 (MQ=255) cTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAAAAATACTTTTTCTTTAGAAC‑TTACTATTTCTTCTGc > 2:77928/1‑141 (MQ=255) cTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTATACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAAAAATACTTTTTCTTTAGAAA‑TCAGTATTCCTTATga > 2:95559/1‑140 (MQ=255) tACAACAGTATATATGCAGTAGTTGACTGTGGGGCCCCAACATAGAGAAATTGGAACGCCAAATTCTACAATCTATAACAGTTGGGGTGATCCCCAACTTAAAAAAATCATTTTTATCTAGAAA‑TTAGTATTTCTTATGCa < 2:373458/141‑1 (MQ=12) acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAGA‑TTAGTATTTCTTATGCATGAg > 2:498915/1‑141 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACCTAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt > 2:830881/1‑141 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt < 2:517330/141‑1 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt < 1:177886/141‑1 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt < 2:449350/141‑1 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt < 1:767546/141‑1 (MQ=255) cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAgt < 1:830377/141‑1 (MQ=255) atatTGGCAGTATTCTACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGGCAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTaa > 2:129725/1‑141 (MQ=255) atTGGCAGTAGTTGGCTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACt < 1:646592/141‑1 (MQ=255) atTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACt < 1:971116/141‑1 (MQ=255) atTGGACGTAGGTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGCGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACt < 1:413915/141‑1 (MQ=255) ttGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTc > 1:331639/1‑141 (MQ=255) gCAGTAGTTGACTGTGGGGACTCAACATAGAGAAATTGGAACGTCAATTTCTACAGACAATGCAAGTTGGAGTGAGTCCCAACATAAAGAACTACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATg < 2:151199/141‑1 (MQ=17) agtagtTGACTGCGGGGCCGCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGACA‑TTAGTATTTCTTATGCATGAGTTGAACTCATGCa > 2:73935/1‑141 (MQ=255) agtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGCAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATCCa > 1:418046/1‑141 (MQ=255) tttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtctcaccccaacATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa < 2:911345‑M2/64‑1 (MQ=255) tttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa < 1:780460‑M2/64‑1 (MQ=255) gtTGTCTGCGGTGTCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa < 1:963280/141‑1 (MQ=255) gtTGACTGCGGGGCCCCAACATAGAGAAATTGTAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAAATCATGACTTCa > 2:908277/1‑141 (MQ=255) gACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTAACGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCatat > 1:805058/1‑141 (MQ=255) gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAg > 1:258727/1‑141 (MQ=255) ccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac > 1:129538/1‑141 (MQ=255) cAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTAcaca > 1:595722/1‑141 (MQ=255) cATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATACAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTa > 2:275192/1‑141 (MQ=255) cATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTa > 1:695810/1‑141 (MQ=255) cATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTa > 2:291215/1‑141 (MQ=255) tAGAGAAATTGGAACGCCAATTTCTACAGGCAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGc < 1:129725/141‑1 (MQ=255) tAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGc < 2:154084/141‑1 (MQ=255) tAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGc < 1:43621/141‑1 (MQ=255) agtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAATTACACATTATCtgt > 2:32379‑M2/54‑141 (MQ=255) agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTCGAAAGTTAGTA‑TTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt > 1:238255/1‑141 (MQ=255) agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt < 1:159426/141‑1 (MQ=255) agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt > 1:419974/1‑141 (MQ=255) aTTGGAACGCCTATTTCTACAGATAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt < 1:4480/141‑1 (MQ=255) aTTGGAACGCCAATTTCTACAGAGAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt < 2:2468/141‑1 (MQ=255) aTTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt < 1:838917/141‑1 (MQ=255) gacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTa < 2:843504‑M2/93‑1 (MQ=255) tGGAACGCCCATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTaa < 1:730830/141‑1 (MQ=255) ggAACGACAATATCGACATACGATGCAAGGTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAAt < 1:746414/141‑1 (MQ=18) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGGAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCACATTTTTAAGTACACATTAGCTGTGACTAATg > 1:458328/1‑141 (MQ=255) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATg > 1:366976/1‑141 (MQ=255) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATg > 1:925577/1‑141 (MQ=255) gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGACCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATACATTCATATTCTTAAGTACACATTAGCTGTGCATAAtc > 2:956287/1‑140 (MQ=17) aaCGCCAATTTCTACAGACAATGCAAGGTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGa < 1:917329/141‑1 (MQ=255) aaCGCCAATTTCTACAGACAATGCAAGATGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGa < 1:269355/141‑1 (MQ=255) cGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATa < 2:28063/141‑1 (MQ=255) cGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATa < 1:603648/141‑1 (MQ=255) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGCCTAATGATaaa > 2:849773/1‑141 (MQ=255) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTCTCTTCCGATATT‑TTTGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa < 1:238787/141‑1 (MQ=21) ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATAATTGTTCTTTAGAAA‑TTCGTAATTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa > 2:569743/1‑141 (MQ=255) tatacttacgcaatagttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAg < 2:719317‑M2/102‑1 (MQ=255) aTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGaa > 2:974696/1‑141 (MQ=255) aTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGaa < 2:595722/141‑1 (MQ=255) aTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTAATGCAGTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGaa > 2:772451/1‑141 (MQ=255) tACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACCCCTTAGCTGTGACTAATGATGAAGACTCGCt > 1:28946/1‑141 (MQ=255) tACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGATGTGACTAATGATAAAGAATCCCt > 2:771795/1‑141 (MQ=255) aGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACa < 2:973351/141‑1 (MQ=255) gACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACAt > 1:178654/1‑141 (MQ=255) tGGAGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTa < 2:533698/141‑1 (MQ=255) gTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCg > 1:731526/1‑141 (MQ=255) gTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCg < 1:356186/141‑1 (MQ=255) ggCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTc < 1:473033/141‑1 (MQ=255) aacATAAAGAAATAATTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAATTCATGCATTCATATTTTTAAGTACAAATTAGCTGTGACTAATGATAGAGAATAGCTACATAATCATTCATTAGTCTTTCTTTata > 2:639237‑M2/4‑140 (MQ=255) acATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCa < 2:419974‑M2/139‑1 (MQ=255) | AAGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAA‑TTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCA > USA300TCH1516_ALE/801810‑802086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |