New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 511972	106 (0.820)	9 (0.070)	6/248	NT	8.1%	intergenic (+40/‑821)	recR/rrs1	recombination protein RecR/16S ribosomal RNA
	?	CP000730	= 512004	101 (0.800)					intergenic (+72/‑789)	recR/rrs1	recombination protein RecR/16S ribosomal RNA

CAAAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/511830‑511972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaAAAAAGCCACAATGATTA‑CACTGTGACTTTTCTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGCATACTCTAAATCGCCAC  <  CP000730/512004‑511865                                                                                                                                                                                                                                                                                              CAAAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGT                                                                                                                                                 >  1:1129154/1‑141   AAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA                                                                                                                                               <  1:1147244/141‑1   AAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA                                                                                                                                               <  1:701513/141‑1                          TTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTG                                                                                                                       <  2:890835/141‑1                          TTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTG                                                                                                                       <  2:246203/141‑1                           TATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTGT                                                                                                                      <  2:31884/141‑1                             TCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTGTGA                                                                                                                    <  2:742232/141‑1                             TCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTGTGA                                                                                                                    <  2:289402/141‑1                             TCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGCCACAATGATTA‑CACTGTGA                                                                                                                    <  2:865227/141‑1                                                                                                      AATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTGTAAT‑CATTGTGGCTTTTTTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGC                                           >  1:419078/1‑141                                                                                                                              ATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGC                   >  2:1545418/1‑141                                                                                                                                     TACTATAGTAAGAAAAGTCACAGTGTAAT‑CATTGTGGCTTTTTTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGCATACTCT            >  2:573187/1‑141                                                                                                                                             TAAAAAAAGCCACAATGATTA‑CACTGTGACTTTTCTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGCATACTCTAAATCGCC    >  2:616641/1‑141                                                                                                                                               AAAAAAGCCACAATGATTA‑CACTGTGACTTTTCTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGCATACTCTAAATCGCCAC  >  1:261335/1‑141                                                                                                                                                                                                                                                                                              CAAAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/511830‑511972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaAAAAAGCCACAATGATTA‑CACTGTGACTTTTCTTACTATAGTATTAAAATCAAAAATGTTTAATAGAAGACATTACATTTCTGTTCTACCTGCGATTGCTTTAGATAATGTTACTTCGTCAGCATACTCTAAATCGCCAC  <  CP000730/512004‑511865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.