BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 511972	106 (0.820)	9 (0.070)	6/248	NT	8.1%	intergenic (+40/‑821)	recR/rrs1	recombination protein RecR/16S ribosomal RNA
*	?	CP000730	= 512004	101 (0.800)	9 (0.070)	6/248	NT	8.1%	intergenic (+72/‑789)	recR/rrs1	recombination protein RecR/16S ribosomal RNA

Only 100 of 116 total aligned reads displayed.

GGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAATGATGTGAATTG  >  CP000730/511864‑512144

ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                                                              >  1:15414/1‑141 (MQ=255)

ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                                                              >  2:569185/1‑141 (MQ=255)

ggTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCttttt                                                                                                                                              >  2:525612/1‑141 (MQ=255)

 gTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTt                                                                                                                                             >  1:261335‑M2/1‑140 (MQ=255)

   ggCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTtta                                                                                                                                           >  2:616641‑M2/1‑138 (MQ=255)

           agagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtgg                                                                                                                                   <  2:1138017/141‑1 (MQ=255)

           agagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtgg                                                                                                                                   >  2:634221/1‑141 (MQ=255)

            gagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TGATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                                                  <  2:827391/141‑1 (MQ=255)

            gagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                                                  <  1:776590/141‑1 (MQ=255)

            gagTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                                                  <  1:1518345/141‑1 (MQ=255)

            gagTATGCTGACGAAGTAACATTATCTAAAGCAACCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                                                  >  1:1255354/1‑141 (MQ=255)

            aagTATGCTGACGTAGTAACATTATCTAAAGCAATCGCAGGTAGAACAAAAATGTAATGTCTTCTATTACACATTTTTGATTTTAATACTATAGAAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTAtggtgtggt                                                                                                                                  <  2:861974/140‑1 (MQ=255)

              gTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATggtgtggtgt                                                                                                                                >  2:607357/1‑141 (MQ=255)

                 tGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGAt                                                                                                                             >  1:516212/1‑141 (MQ=255)

                  gCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATg                                                                                                                            >  2:1573510/1‑141 (MQ=255)

                  gCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAAAAAAGCCACAATGATTA‑CACTGTGACTTTTCttactatagtattaaaat                                                                                                                            >  2:1545418‑M2/1‑123 (MQ=255)

                         aaGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTactact                                                                                                                     <  2:1334649/141‑1 (MQ=255)

                          aGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGGACTACtt                                                                                                                    >  2:89980/1‑141 (MQ=255)

                          aGTAACATTATCTAAAGCAATCGCAGGGAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGCTTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACtt                                                                                                                    <  1:1159006/141‑1 (MQ=255)

                           gTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACttt                                                                                                                   >  2:205543/1‑141 (MQ=255)

                             aaCATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCCTCTATTAAACATTTTTTTTTTTTTTACTATAGTAAGAAAAGTCACAGTA‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACtttct                                                                                                                 >  2:806312/1‑139 (MQ=255)

                                 ttATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGc                                                                                                             <  2:254640/141‑1 (MQ=255)

                                  tATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCg                                                                                                            <  2:888663/141‑1 (MQ=255)

                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                                                           <  1:943832/141‑1 (MQ=255)

                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                                                           <  1:159391/141‑1 (MQ=255)

                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                                                           <  2:522532/141‑1 (MQ=255)

                                   aTCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCgg                                                                                                           <  2:1500945/141‑1 (MQ=255)

                                    tCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATTCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgt                                                                                                          <  1:619498/141‑1 (MQ=255)

                                    tCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgt                                                                                                          >  1:1625795/1‑141 (MQ=255)

                                    tCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgt                                                                                                          <  2:537176/141‑1 (MQ=255)

                                     cTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGTAAAGACACAGTG‑TTATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGgtg                                                                                                         >  1:1313315/1‑141 (MQ=255)

                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCg                                                                                                    <  2:1109057/141‑1 (MQ=255)

                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCg                                                                                                    <  1:277373/141‑1 (MQ=255)

                                          gCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAAAAAAGCCACAATG‑ATTACACTGTGACTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacatt                                                                                                    >  1:419078‑M2/1‑99 (MQ=255)

                                          gCAAGCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCg                                                                                                    <  1:766318/141‑1 (MQ=255)

                                            aaTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggt                                                                                                  <  1:221388/141‑1 (MQ=255)

                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                                                 <  1:878113/141‑1 (MQ=255)

                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                                                 <  1:700365/141‑1 (MQ=255)

                                             aTCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtg                                                                                                 >  1:806338/1‑141 (MQ=255)

                                              tCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtgg                                                                                                <  1:229422/141‑1 (MQ=255)

                                              tCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtgg                                                                                                >  1:1218240/1‑141 (MQ=255)

                                               cGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCggtggt                                                                                               >  2:178023/1‑141 (MQ=255)

                                                gCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTa                                                                                              >  1:171425/1‑141 (MQ=255)

                                                gCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTa                                                                                              <  2:1335741/141‑1 (MQ=255)

                                                   ggTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATgg                                                                                           >  2:876847/1‑141 (MQ=255)

                                                     tAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGtt                                                                                         <  2:1087083/141‑1 (MQ=255)

                                                     tAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGtt                                                                                         >  1:133458/1‑141 (MQ=255)

                                                       gAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTa                                                                                       >  2:1168435/1‑141 (MQ=255)

                                                        aaCAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCAGTGTGGCGGTGGTATGGTTTAc                                                                                      <  1:1183889/141‑1 (MQ=255)

                                                            gAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTGTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAg                                                                                  <  2:1530799/141‑1 (MQ=255)

                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                                                 >  2:1435676/1‑141 (MQ=255)

                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                                                 <  2:739015/141‑1 (MQ=255)

                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAAACATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                                                 >  1:425770/1‑141 (MQ=255)

                                                             aaaTGTAATGTCTTCTATTAAACATTTTTGATTTTAATAATATAGAAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGt                                                                                 <  2:1146300/141‑1 (MQ=255)

                                                                 gtaatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTa                                                                             <  2:516212/141‑1 (MQ=255)

                                                                 gtaatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTa                                                                             <  1:211867/141‑1 (MQ=255)

                                                                   aatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACt                                                                           <  1:642889/141‑1 (MQ=255)

                                                                   aatgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACt                                                                           <  1:927772/141‑1 (MQ=255)

                                                                    atgtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTg                                                                          <  2:299458/141‑1 (MQ=255)

                                                                      gtCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAg                                                                        <  1:791366/141‑1 (MQ=255)

                                                                        cttctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAggg                                                                      >  2:1104871/1‑141 (MQ=255)

                                                                         ttctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGa                                                                     <  2:1079726/141‑1 (MQ=255)

                                                                           ctATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATg                                                                   <  2:598978/141‑1 (MQ=255)

                                                                             aTTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATggg                                                                 <  1:743146/141‑1 (MQ=255)

                                                                             aTTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATggg                                                                 >  1:1390025/1‑141 (MQ=255)

                                                                              ttAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGCGGGCTGGGt                                                                <  2:738285/141‑1 (MQ=255)

                                                                              ttAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGt                                                                <  2:15414/141‑1 (MQ=255)

                                                                                   cATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATTGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTTCCTAGTTTTACTGAGGGATGTGTAATCt                                                           >  2:630164/1‑141 (MQ=255)

                                                                                     tttttGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCttt                                                         >  1:303261/1‑141 (MQ=255)

                                                                                       tttGATTTTAATACTATAGTAAGAAAGGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAg                                                       <  2:1307924/141‑1 (MQ=255)

                                                                                        ttGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAgg                                                      <  2:527767/141‑1 (MQ=255)

                                                                                         tGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGa                                                     >  1:72408/1‑141 (MQ=255)

                                                                                          ttttttttttcTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGTGGTGTGGCTGTGTTATGGTTTACCTAGTTTTACTGAGGGATTGGTAATCTTTAGGaa                                                    >  2:1511692/11‑141 (MQ=255)

                                                                                          gATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGaa                                                    <  2:686126/141‑1 (MQ=255)

                                                                                              ttAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGaagcaa                                                >  1:855574/1‑141 (MQ=255)

                                                                                                 aTACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGcc                                             >  1:716509/1‑141 (MQ=255)

                                                                                                   aCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCgt                                           <  1:1162808/141‑1 (MQ=255)

                                                                                                   aCTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCgt                                           <  1:521865/141‑1 (MQ=255)

                                                                                                           aaGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTtgtg                                   >  1:1357276/1‑141 (MQ=255)

                                                                                                             gAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGAt                                 <  2:350676/141‑1 (MQ=255)

                                                                                                              aaaaGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGAtt                                >  1:424586/1‑141 (MQ=255)

                                                                                                              aaaaGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGAtt                                <  1:751241/141‑1 (MQ=255)

                                                                                                                 aGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGt                             <  1:1279484/141‑1 (MQ=255)

                                                                                                                 aGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGt                             <  1:819771/141‑1 (MQ=255)

                                                                                                                 aGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGt                             >  1:1587090/1‑141 (MQ=255)

                                                                                                                   tCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTa                           <  1:1012947/141‑1 (MQ=255)

                                                                                                                   tCACAGTG‑TAATCATTGTGGCTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccacctaccga                           <  2:742232‑M2/141‑116 (MQ=255)

                                                                                                                   tCACAGTG‑TAATCATTGTGGCTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccacctaccga                           <  2:289402‑M2/141‑116 (MQ=255)

                                                                                                                   tCACAGTG‑TAATCATTGTGGCTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccacctaccga                           <  2:865227‑M2/141‑116 (MQ=255)

                                                                                                                    cacaGTG‑TAATCATTGTGGCTTTTTTTTTGTTTTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTAc                          >  2:820449/1‑141 (MQ=255)

                                                                                                                    cacaGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTAc                          >  2:112595/1‑141 (MQ=255)

                                                                                                                      caGTG‑TAATCATTGTGGCTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccacctaccgataa                        <  2:890835‑M2/141‑119 (MQ=255)

                                                                                                                      caGTG‑TAATCATTGTGGCTTTTCttactatagtattaaaatcaaaaatgtttaatagaagacattacatttctgttctacctgcgattgctttagataatgttacttcgtcagcatactctaaatcgccacctaccgataa                        <  2:246203‑M2/141‑119 (MQ=255)

                                                                                                                       aGTG‑TAATCATTGTGGGTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTc                       >  1:478633/1‑141 (MQ=255)

                                                                                                                          g‑tAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTaa                    <  1:407397/141‑1 (MQ=255)

                                                                                                                            tAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAAt                   <  1:65685/141‑1 (MQ=255)

                                                                                                                                   tgtgGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAatg            <  1:1168435/141‑1 (MQ=255)

                                                                                                                                      ggCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAatgatg         <  2:1390025/141‑1 (MQ=255)

                                                                                                                                       gCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAATGAtgt        >  1:1109217/1‑141 (MQ=255)

                                                                                                                                             tttATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAATGATGTGAATTg  >  1:979718/1‑141 (MQ=255)

GGTGGCGATTTAGAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAATGTCTTCTATTAAACATTTTTGATTTTAATACTATAGTAAGAAAAGTCACAGTG‑TAATCATTGTGGCTTTTTTTATGGTGTGGTGTGATGTACTACTTTATTTGCGGTGTGGCGGTGGTATGGTTTACCTAGTTTTACTGAGGGATGGGTAATCTTTAGGAAGCAAGCCGTTGGTTGTGATTTGTTACTTCTAATAGTAATGATGTGAATTG  >  CP000730/511864‑512144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.