New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2609395 =	51 (0.930)	5 (0.100)	5/230	NT	10.6%	intergenic (‑225/‑210)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein
	?	CP000730	2609451 =	38 (0.760)					intergenic (‑281/‑154)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein

ATGAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCG  >  CP000730/2609256‑2609534                                                                                                                                            |                                                                                                                                            aTGAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTaa                                                                                                                                            >  1:536056/1‑141 (MQ=255)  aggcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaaaa                                                                                                                                           >  1:374192‑M1/139‑141 (MQ=255)    gcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAg                                                                                                                                         <  1:588390‑M1/5‑1 (MQ=255)     cgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagtatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGc                                                                                                                                        <  1:611783‑M1/6‑1 (MQ=255)     aTTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGc                                                                                                                                        >  2:277172/1‑141 (MQ=255)      tttCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCt                                                                                                                                       >  1:635327/1‑141 (MQ=255)       ttCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCtt                                                                                                                                      >  1:128522/1‑141 (MQ=255)       aagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCtt                                                                                                                                      <  1:520‑M1/8‑1 (MQ=255)       aagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcacagaaacaaAAAAGCtt                                                                                                                                      >  2:253244‑M1/134‑141 (MQ=255)        agaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTc                                                                                                                                     <  1:397905‑M1/9‑1 (MQ=255)        agaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtataatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagccccgcaacaaAAaagcctc                                                                                                                                     <  2:30585‑M1/9‑4 (MQ=255)           aaataaatAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTGTATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTaa                                                                                                                                  <  1:71732/141‑1 (MQ=255)            aataaataAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAc                                                                                                                                 >  2:301479/1‑141 (MQ=255)                    aaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACg                                                                                                                         >  1:534697/1‑141 (MQ=255)                            tgtgaaatacatCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGa                                                                                                                 >  1:302861/12‑141 (MQ=255)                            tgtgATGTATTTCACAAATTTATCACTATTTTGGAGAATTAAGAAATATAAAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTGTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGa                                                                                                                 >  2:499155/1‑141 (MQ=255)                            tgtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGa                                                                                                                 <  2:536056/141‑1 (MQ=255)                             gtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAg                                                                                                                >  1:314097/1‑141 (MQ=255)                             gtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAg                                                                                                                >  2:636405/1‑141 (MQ=255)                                  gTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTcc                                                                                                           <  2:297743/141‑1 (MQ=255)                                      ttCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTa                                                                                                       >  2:138036/1‑141 (MQ=255)                                       tCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTAt                                                                                                      <  1:44121/141‑1 (MQ=255)                                        cacaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATc                                                                                                     <  1:550002/141‑1 (MQ=255)                                         acaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATTAGGTTCCTGTATca                                                                                                    >  2:514899/1‑141 (MQ=255)                                         acaAATTTATCACTATTTTGGAAAATTAAGAAATATATAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTATAGAGATTAAAAGCTTCTAACATGATACGGAATATGAGGATCCTGTATca                                                                                                    >  1:8846/1‑141 (MQ=255)                                              tttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTa                                                                                               <  2:369623/141‑1 (MQ=255)                                               ttATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAg                                                                                              <  1:151843/141‑1 (MQ=255)                                                 taaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATACGGAATATGAGGGTCCTGTATCACATTAGaa                                                                                            >  1:686825‑M1/92‑141 (MQ=255)                                                 aTCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGaa                                                                                            <  1:301479/141‑1 (MQ=255)                                                  tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAg                                                                                           >  2:579087/1‑141 (MQ=255)                                                   cACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGc                                                                                          >  1:443034/1‑141 (MQ=255)                                                    agtATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCt                                                                                         <  2:702365/139‑1 (MQ=255)                                                    aCTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTACCACATTATAAGCt                                                                                         >  2:593998/1‑141 (MQ=255)                                                       aTTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCtttt                                                                                      <  2:403603/141‑1 (MQ=255)                                                         agtaagaaaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCtttttt                                                                                    >  2:29844/7‑141 (MQ=255)                                                          ttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttg                                                                                   <  2:435310/141‑1 (MQ=255)                                                           tGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgt                                                                                  >  2:291832/1‑141 (MQ=255)                                                           tGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgt                                                                                  <  2:21028/141‑1 (MQ=255)                                                            ggAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgtt                                                                                 <  1:442502/141‑1 (MQ=255)                                                              aaaaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGc                                                                               >  1:348175/1‑141 (MQ=255)                                                               aaaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCg                                                                              >  2:520/1‑141 (MQ=255)                                                                   tAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGc                                                                          >  2:50725/1‑141 (MQ=255)                                                                    aaGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCt                                                                         <  1:160963/141‑1 (MQ=255)                                                                    aaGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCt                                                                         <  2:516505/141‑1 (MQ=255)                                                                          tatTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATAtt                                                                   <  2:302861/141‑1 (MQ=255)                                                                            tttAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaa                                                                 <  1:682479/141‑1 (MQ=255)                                                                                         aaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaat                                                    <  1:277172/141‑1 (MQ=255)                                                                                          aGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaatg                                                   >  2:397905/1‑141 (MQ=255)                                                                                           gTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaatga                                                  <  1:127173/141‑1 (MQ=255)                                                                                               aataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGc                                              >  1:276199/1‑141 (MQ=255)                                                                                                 catgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATcac                                                                                                   <  2:147710‑M1/43‑1 (MQ=255)                                                                                                 catgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATcac                                                                                                   >  1:147710‑M1/44‑86 (MQ=255)                                                                                                   aGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGc                                          <  1:441360/141‑1 (MQ=255)                                                                                                     tCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTg                                        >  2:579704/1‑141 (MQ=255)                                                                                                         aaaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCtt                                    >  1:558066/1‑141 (MQ=255)                                                                                                          aaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTa                                   >  1:352811/1‑141 (MQ=255)                                                                                                             tatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCt                                <  1:234906/141‑1 (MQ=255)                                                                                                                  tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAg                           >  1:246184/1‑141 (MQ=255)                                                                                                                   aaaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATAAGACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGa                          <  1:311777/141‑1 (MQ=255)                                                                                                                    aaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGaa                         <  1:681986/141‑1 (MQ=255)                                                                                                                      aTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATc                       >  2:222961/1‑141 (MQ=255)                                                                                                                           tataagcaccgcaacaaAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                     >  1:646112‑M1/18‑90 (MQ=255)                                                                                                                           tataagcaccgcaacaaAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                     <  2:646112‑M1/73‑1 (MQ=255)                                                                                                                                      gACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAAc       <  1:499155/141‑1 (MQ=255)                                                                                                                                       aCATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACt      >  1:647698/1‑141 (MQ=255)                                                                                                                                        cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATAAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt     <  2:314097/141‑1 (MQ=255)                                                                                                                                           tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg  <  2:128522/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                            ATGAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCG  >  CP000730/2609256‑2609534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.