| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1097237 = | 43 (0.920) | 8 (0.190) | 8/246 | 4.6 | 15.6% | intergenic (+11/‑122) | cydB/ktrC | cytochrome d ubiquinol oxidase subunit II/possible Trk family potassium (K+) transporter, NAD+ binding protein |
| ? | CP000730 | 1097291 = | 47 (1.090) | intergenic (+65/‑68) | cydB/ktrC | cytochrome d ubiquinol oxidase subunit II/possible Trk family potassium (K+) transporter, NAD+ binding protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGACTACATATTCTTTACCCATACTCGCCCTCCATTAAATGATTTTCATCAATTCATTGAAAATATAAATTTAAAATTATTATAAATGAGTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1097380‑1097237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttggggtaCTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCATTA > CP000730/1097291‑1097430 TGACTACATATTCTTTACCCATACTCGCCCTCCATTAAATGATTTTCATCAATTCATTGAAAATATAAATTTAAAATTATTATAAATGAGTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGag > 2:543562/1‑139 TAAATTTAAAATTATTATAAATGAGTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGG > 2:55189/1‑141 AAATGAGTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAA > 1:396665/1‑141 GTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTAC > 1:210577/1‑56 GTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTAC < 2:210577/56‑1 ACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGT > 2:172636/1‑141 CCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGGTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCAT > 2:248067/1‑141 CTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGTCGAGTATGGGTAAAGAATATGTAGTCATCGGT > 1:582295/1‑141 GCAAGTAAATGAAAGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTAT < 1:55189/141‑1 AGTTGGGGTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTG < 1:92189/141‑1 GTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCAT < 1:143496/141‑1 GTACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCAT < 1:218188/141‑1 ACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCATTA < 2:324988/141‑1 ACTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCATTA < 2:284636/141‑1 TGACTACATATTCTTTACCCATACTCGCCCTCCATTAAATGATTTTCATCAATTCATTGAAAATATAAATTTAAAATTATTATAAATGAGTACCCCAACTAAATTATCTAAATGCAGTAATGCAAGTAAATGAAAGTTGGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1097380‑1097237‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agttggggtaCTCATTTATAATAATTTTAAATTTATATTTTCAATGAATTGATGAAAATCATTTAATGGAGGGCGAGTATGGGTAAAGAATATGTAGTCATCGGTCTAGGTCGTTTTGGAGGTAGTATCGTTCGTGAGTTGAATGCATTA > CP000730/1097291‑1097430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |