New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	533277 =	93 (1.160)	6 (0.080)	6/250	10.3	6.4%	intergenic (+2848/‑2877)	veg/rplY	hypothetical protein/ribosomal protein L25
	?	CP000730	= 533297	88 (1.180)					intergenic (+2868/‑2857)	veg/rplY	hypothetical protein/ribosomal protein L25
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAACAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTT  >  CP000730/533138‑533411                                                                                                                                            |                                                                                                                                        aaaCAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑t                                                                                                                                       >  2:493017/1‑141 (MQ=255)      gATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑tttttt                                                                                                                                  >  1:422303/1‑141 (MQ=255)      gATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑tttttt                                                                                                                                  <  1:193517/141‑1 (MQ=255)       aTGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑ttttttt                                                                                                                                 >  2:274448/1‑141 (MQ=255)        tGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTa                                                                                                                                >  2:783339/1‑141 (MQ=255)          aaGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGt                                                                                                                              >  2:489687/1‑141 (MQ=255)               gtaaaaGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTGGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTa                                                                                                                         <  2:652340/136‑1 (MQ=255)                 aCCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTAtt                                                                                                                       <  2:880913/141‑1 (MQ=255)                     gATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATg                                                                                                                   >  2:655653/1‑141 (MQ=255)                       tAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGtt                                                                                                                 <  2:105839/141‑1 (MQ=255)                        aaaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGACGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                >  1:782852/1‑141 (MQ=255)                         aaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCGTTGTCGGCAG‑TATTTTTAGTTTGTATTAATGtttt                                                                                                               <  2:785708/141‑1 (MQ=255)                          aaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttttt                                                                                                              <  2:220021/141‑1 (MQ=255)                           aaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGtttttt                                                                                                             <  2:995852/141‑1 (MQ=255)                            aCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttttttt                                                                                                            <  1:281612/141‑1 (MQ=255)                                 aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                       <  2:757240/141‑1 (MQ=255)                                 aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                       >  2:171174/1‑141 (MQ=255)                                   aTCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttattttta                                                                                                     <  2:513604/141‑1 (MQ=255)                                      agaagaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttagtttgtatt                                                                                                  <  2:909668/141‑6 (MQ=255)                                         agaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGaaa                                                                                               >  1:724111/1‑141 (MQ=255)                                           aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:243951/141‑1 (MQ=255)                                           aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:287112/141‑1 (MQ=255)                                            ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:481063/141‑1 (MQ=255)                                            ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                            <  1:981935/141‑1 (MQ=255)                                            ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                            >  2:676913/1‑141 (MQ=255)                                             tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTtttttatttttactccacgcct                                                                                           >  2:452676/1‑131 (MQ=255)                                             tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCt                                                                                           >  2:168387/1‑141 (MQ=255)                                              cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:135585/1‑141 (MQ=255)                                              cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:490148/1‑141 (MQ=255)                                              cAGAAGAAGCTTAATAAAGTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:749906/1‑141 (MQ=255)                                                  agaagCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCtaataa                                                                                      <  1:493905/141‑1 (MQ=255)                                                        ttAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAatatat                                                                                <  2:647808/141‑1 (MQ=255)                                                          aaTCANATTAATAGTAAGCGATTTAATAAAATTACCATAAGTTGATTTGATACGGTAGATATATCATAAATCTTTGTCGTCAG‑TTTTTTTAGTTTGTATTAATGTTTNTTTATTTNTAATGAAAGGCTAATAAATATATAc                                                                              <  1:93444/141‑1 (MQ=255)                                                               aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATACATATATACGTTaa                                                                         >  2:604327/1‑141 (MQ=255)                                                               aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                         <  1:48158/141‑1 (MQ=255)                                                               aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                         >  1:883840/1‑141 (MQ=255)                                                                ttttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAAc                                                                        <  1:655653/141‑1 (MQ=255)                                                                 tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       >  1:697573/1‑141 (MQ=255)                                                                 tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       <  2:802948/141‑1 (MQ=255)                                                                    atatTTAGCGATGTAATACCTTCGCAATAAGTTGATTGGATACTGGCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTCGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGAt                                                                    <  2:97136/141‑1 (MQ=255)                                                                    atatTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGtagacaatt                                                                    >  2:192043/1‑133 (MQ=255)                                                                      atTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTa                                                                  >  1:556828/1‑141 (MQ=255)                                                                       tttAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTat                                                                 >  1:990648/1‑141 (MQ=255)                                                                       tttAACAATGTAATAAATTTGAAATAAGTTAATTTGATACTGTCGATAAAGCATAAAACTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATTAAAGGCTAAGAAATATATACGTTAACAGATTat                                                                 <  1:493017/141‑1 (MQ=255)                                                                               tGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGatat                                                         <  1:536196/141‑1 (MQ=255)                                                                                gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                        <  2:232702/141‑1 (MQ=255)                                                                                gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGGCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                        <  2:807363/141‑1 (MQ=255)                                                                                 tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                >  1:93722/1‑84 (MQ=255)                                                                                 tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGttt                                                                                                                <  2:93722/84‑1 (MQ=255)                                                                                     aCATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAat                                                   >  2:56808/1‑141 (MQ=255)                                                                                      cATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAatt                                                  >  1:996441/1‑141 (MQ=255)                                                                                        tttGAAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAattat                                                <  1:636620/141‑1 (MQ=255)                                                                                                 aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTATGGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  1:761033/1‑141 (MQ=255)                                                                                                 aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  2:735670/1‑141 (MQ=255)                                                                                                 aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  1:209903/1‑141 (MQ=255)                                                                                                      atttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGa                                  >  1:937625/1‑141 (MQ=255)                                                                                                       tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑ttttttt                                                                                                                                 <  2:475013/45‑1 (MQ=255)                                                                                                       tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑ttttttt                                                                                                                                 >  1:475013/1‑45 (MQ=255)                                                                                                       tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATACACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGAt                                 >  2:695967/1‑141 (MQ=255)                                                                                                        ttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTGAAAGGTTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCtttta                                >  2:278892/1‑137 (MQ=255)                                                                                                              cTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAAtt                          <  1:390403/141‑1 (MQ=255)                                                                                                                 tCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                       <  2:342365/141‑1 (MQ=255)                                                                                                                 tCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                       >  2:459504/1‑141 (MQ=255)                                                                                                                   gATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATTAAAATTATTGATTCATTGCTGATAAAAATTGCGtt                     >  1:998796/1‑141 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923665/1‑122 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923797/122‑1 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923797/1‑122 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923666/1‑122 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923666/122‑1 (MQ=255)                                                                                                                      aaagcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923665/122‑1 (MQ=255)                                                                                                                        agcataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAat                >  1:830480/1‑141 (MQ=255)                                                                                                                          ctttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  1:534276/7‑141 (MQ=255)                                                                                                                          ctttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  1:591681/7‑141 (MQ=255)                                                                                                                          cataaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  2:692800/1‑141 (MQ=255)                                                                                                                           tttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       >  2:571708/6‑83 (MQ=255)                                                                                                                           tttatgcTTTATCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       <  1:571708/78‑1 (MQ=255)                                                                                                                             aaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGc           >  2:106136/1‑141 (MQ=255)                                                                                                                             aaagcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCATTTGAATGATGc           >  1:315754/1‑141 (MQ=255)                                                                                                                               agcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc         >  2:49155/1‑141 (MQ=255)                                                                                                                               agcTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc         >  1:75170/1‑141 (MQ=255)                                                                                                                                 tttgtattaatg‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       >  2:403108/12‑141 (MQ=255)                                                                                                                                 cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCGTTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       >  1:559984/1‑141 (MQ=255)                                                                                                                                 cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       <  2:724111/141‑1 (MQ=255)                                                                                                                                 cTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       <  2:649424/141‑1 (MQ=255)                                                                                                                                  tttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTa      <  1:876393/141‑1 (MQ=255)                                                                                                                                   ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTggggaagaattgttt     >  2:552047/1‑127 (MQ=255)                                                                                                                                   ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAt     >  2:106199/1‑141 (MQ=255)                                                                                                                                   ttGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGAGTTTGAATGATGATAGTAt     >  1:302772/1‑141 (MQ=255)                                                                                                                                     gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  1:138437/1‑141 (MQ=255)                                                                                                                                     gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:626611/1‑141 (MQ=255)                                                                                                                                     gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:523856/1‑141 (MQ=255)                                                                                                                                     gTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:115664/1‑141 (MQ=255)                                                                                                                                      tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  <  1:172697/141‑1 (MQ=255)                                                                                                                                      tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  >  1:237145/1‑141 (MQ=255)                                                                                                                                      tCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  >  2:364408/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                        AAACAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAG‑TTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTT  >  CP000730/533138‑533411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.