BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	CP000730	353,691	Δ3 bp	5.7%	intergenic (+127/‑24)	USA300HOU_0322 → / → USA300HOU_0323	hypothetical protein/hypothetical membrane protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	353694 =	89 (1.000)	5 (0.060)	5/236	NT	5.7%	intergenic (+130/‑23)	USA300HOU_0322/USA300HOU_0323	hypothetical protein/hypothetical membrane protein
*	?	CP000730	= 353690	85 (1.050)	5 (0.060)	5/236	NT	5.7%	intergenic (+126/‑27)	USA300HOU_0322/USA300HOU_0323	hypothetical protein/hypothetical membrane protein

Only 100 of 104 total aligned reads displayed.

AAGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGATGTG  >  CP000730/353557‑353833

aaaaagattaacataggctttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatatatatataagaacacaaacgcaagtttgtaaata                                                                                                                                          <  1:1007571‑M1/4‑1 (MQ=255)

  aaagattaacataggctttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaaataat                                                                                                                                        >  2:263354‑M1/136‑141 (MQ=255)

  aaagattaacataggctttctttaaaacttttaaacagattaaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaaataat                                                                                                                                        >  2:548259‑M1/136‑141 (MQ=255)

   aagattaacataggctttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaaataata                                                                                                                                       >  2:1010434‑M1/135‑141 (MQ=255)

     tAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataataat                                                                                                                                     >  2:637033/1‑141 (MQ=255)

     tAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataataat                                                                                                                                     >  2:329407/1‑141 (MQ=255)

     gattaacataggctttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaaataataat                                                                                                                                     >  1:735726‑M1/133‑141 (MQ=255)

      attaacataggctttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaAataataata                                                                                                                                    <  2:68701‑M1/10‑1 (MQ=255)

      aaCATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATTAATTTAAACATTTATATATAAGAACACAAACGCATGTTTGTAAataataataata                                                                                                                                    <  2:1083862/141‑1 (MQ=255)

           aGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGa                                                                                                                               <  2:476760/141‑1 (MQ=255)

                ttctttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATGATAATAAAGGAGTAAg                                                                                                                          <  2:502016/141‑1 (MQ=255)

                  tttctttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgtaagtttgtaAATAATAATAAAGGAGTaagtc                                                                                                                        <  2:126495‑M1/22‑3 (MQ=255)

                   tttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTATTAAAATAAAAAAGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGaaaaaaaaa                                                                                                                       <  2:397977/141‑9 (MQ=255)

                    ttAAAACTTTTAACCAGTCTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACaa                                                                                                                      <  1:582447/141‑1 (MQ=255)

                     tAAAACTTTTAACCAGGTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAGCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAAt                                                                                                                     <  1:790169/141‑1 (MQ=255)

                       ttaaaacttttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgtaagtttgtaAATAATAATAAAGGAGTAAGTCAATgg                                                                                                                   >  2:525842‑M1/115‑141 (MQ=255)

                            tttAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGaaaaa                                                                                                              <  2:391250/141‑1 (MQ=255)

                             ttAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAAt                                                                                                             <  1:976029/141‑1 (MQ=255)

                               aaCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCg                                                                                                           <  1:729532/141‑1 (MQ=255)

                                ttaaccagtttcaaaaagtaaatgagctttagcgacaataatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgcaagtttgtaAATAATAATAAAGGAGTAAGACAATGGAAAAATCGa                                                                                                          <  1:450387‑M1/36‑1 (MQ=255)

                                aCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGa                                                                                                          <  2:704324/141‑1 (MQ=255)

                                aCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGa                                                                                                          >  2:881182/1‑141 (MQ=255)

                                   aGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCa                                                                                                       <  1:924412/141‑1 (MQ=255)

                                     tttCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCaaa                                                                                                     >  2:90644/1‑141 (MQ=255)

                                      ttCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCaaaa                                                                                                    <  2:589092/141‑1 (MQ=255)

                                        cAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaata                                                                                                  >  1:995107/1‑141 (MQ=255)

                                          aaaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaataat                                                                                                >  1:793705/1‑141 (MQ=255)

                                          aaaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaataat                                                                                                >  1:578532/1‑141 (MQ=255)

                                           aaaGTGAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTGTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATg                                                                                               <  2:540041/141‑1 (MQ=255)

                                           aaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATg                                                                                               >  2:679721/1‑141 (MQ=255)

                                                 aaTGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAAAGCAAGAATGTAACTAATAACACTAACGGAGTAACAAAATGGAAAACTTGATAAAAATAATGACaata                                                                                         >  1:915019/1‑141 (MQ=255)

                                                  aTGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataa                                                                                        >  2:411463/1‑141 (MQ=255)

                                                   tGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataat                                                                                       >  1:302697/1‑141 (MQ=255)

                                                   tGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataat                                                                                       >  2:928632/1‑141 (MQ=255)

                                                    gAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATAGATCAAAATAATGACAataata                                                                                      >  1:14981/1‑141 (MQ=255)

                                                      gCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAgg                                                                                    >  1:135182/1‑141 (MQ=255)

                                                       cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                                   >  1:324534/1‑141 (MQ=255)

                                                       cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                                   >  2:507060/1‑141 (MQ=255)

                                                       cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                                   <  2:901824/141‑1 (MQ=255)

                                                         ttAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAt                                                                                 <  2:29233/141‑1 (MQ=255)

                                                         ttAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAt                                                                                 >  1:360733/1‑141 (MQ=255)

                                                           aGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttg                                                                               <  1:160564/141‑1 (MQ=255)

                                                           aGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttg                                                                               <  1:1069308/141‑1 (MQ=255)

                                                            gCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttgt                                                                              >  2:310183/1‑141 (MQ=255)

                                                             cGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttgtt                                                                             >  2:559015/1‑141 (MQ=255)

                                                                cAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTgttgtt                                                                          <  1:815848/141‑1 (MQ=255)

                                                                 aataatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTc                                                                         <  2:122515/141‑1 (MQ=255)

                                                                 aataatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTc                                                                         <  1:379674/141‑1 (MQ=255)

                                                                    aatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAgg                                                                      >  2:858505/1‑141 (MQ=255)

                                                                       aatttttaaaataaacacgatataaatttaaacatttatatataagaacacaaacgtaagtttgtaAATAATAATAAAGGAGTAAGTCAATGGAAAAATCGATCAAAATAATGACAATAATAGGACTTGTTATTCAGGGtt                                                                   <  1:903122‑M1/75‑1 (MQ=255)

                                                                        tttAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATAGATCAAAATAATGACAATAATAGGAATTGTTGTTAAGGGttt                                                                  >  2:63810/1‑141 (MQ=255)

                                                                          tAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAg                                                                >  1:753532/1‑141 (MQ=255)

                                                                            aaaTAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAATAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCa                                                              >  2:820866/1‑141 (MQ=255)

                                                                              tgttcttatatatAAATGTTTAAATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAATAAGACAATGGAAAAATCGAACAAAATAATGACAATAGTAGGAATTGATGTTCAGGGATTataaac                                                            >  2:788973/10‑136 (MQ=255)

                                                                              aaaataaacacgatataaatttaaacatttatatataagaacacaaacgtaagtttgtaAATAATAATAAAGGAGTAAGTCAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTATTCAGGGTTTAGCAAc                                                            <  2:365681‑M1/82‑1 (MQ=255)

                                                                               tAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGATGTTCAGGGTTTAGCAACg                                                           >  2:341183/1‑141 (MQ=255)

                                                                                 aaCACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGt                                                         >  2:424483/1‑141 (MQ=255)

                                                                                  acacGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTa                                                        <  2:412389/141‑1 (MQ=255)

                                                                                  acacGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTa                                                        <  1:699105/141‑1 (MQ=255)

                                                                                       atatAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAg                                                   >  2:769581/1‑141 (MQ=255)

                                                                                        tataAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGt                                                  >  1:900764/1‑141 (MQ=255)

                                                                                          taAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                                <  1:626716/141‑1 (MQ=255)

                                                                                          taAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                                <  1:941124/141‑1 (MQ=255)

                                                                                          taAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                                <  1:776854/141‑1 (MQ=255)

                                                                                           aaaTTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTa                                               <  1:87823/141‑1 (MQ=255)

                                                                                            aaTTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTAc                                              <  2:415704/141‑1 (MQ=255)

                                                                                              tttAAACATTTATATATAAGAACACAACCGCAAGTTTGTAAATAATAATAATAAAATAGTAATATTATGGAAAAATCGATCAAAATATTGACTATAATTTTGATTGTTGTTCAGGTTATAGCCACCGTATTTAGTTTACTa                                            <  2:368803/141‑1 (MQ=255)

                                                                                               ttAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTAt                                           <  2:422482/141‑1 (MQ=255)

                                                                                                  taaaTTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGa                                        >  1:804253/4‑141 (MQ=255)

                                                                                                    cATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATg                                      <  1:1023270/141‑1 (MQ=255)

                                                                                                    cATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATg                                      >  1:453888/1‑141 (MQ=255)

                                                                                                      tttATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGt                                    <  2:12365/141‑1 (MQ=255)

                                                                                                      tttATATATAAGAACAAAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGt                                    <  2:669739/141‑1 (MQ=255)

                                                                                                        tatatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGttt                                  <  2:432784/141‑1 (MQ=255)

                                                                                                         atatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGtttt                                 <  1:858154/141‑1 (MQ=255)

                                                                                                          tatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTa                                <  2:202523/141‑1 (MQ=255)

                                                                                                          tatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGAAAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGCTGGTTTTa                                <  2:202803/141‑1 (MQ=255)

                                                                                                           atataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTag                               <  2:715930/141‑1 (MQ=255)

                                                                                                                 gAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCAt                         <  2:395281/141‑1 (MQ=255)

                                                                                                                  aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCAtt                        >  2:559123/1‑140 (MQ=255)

                                                                                                                  aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATc                        >  2:189237/1‑141 (MQ=255)

                                                                                                                  aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATc                        <  1:330826/141‑1 (MQ=255)

                                                                                                                    cacaAACGCGAGTTTGTAAATAATTATAATGAAGGAGTAAGACAAGGGAAAAATCGGTCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCGGCATCAg                      <  2:624443/141‑1 (MQ=255)

                                                                                                                     acaAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAgg                     <  2:153422/141‑1 (MQ=255)

                                                                                                                      caAACGCAAGTTTGTAAATAATAATAATACAGGATTAAGACAATGGACAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTGCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAACATCAGgt                    >  2:299979/1‑141 (MQ=255)

                                                                                                                      caAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAggg                    >  1:843713/1‑140 (MQ=255)

                                                                                                                      caAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGgt                    >  2:525078/1‑141 (MQ=255)

                                                                                                                        aacttgcgTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGgtgt                  >  2:514325/8‑141 (MQ=255)

                                                                                                                              aGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGAc            <  1:619408/141‑1 (MQ=255)

                                                                                                                              aGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGAAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATAAGGTGTAATGaa            >  2:583175/1‑140 (MQ=255)

                                                                                                                                tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTNATGACTa          >  2:814909/1‑141 (MQ=255)

                                                                                                                                tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa          >  1:667731/1‑141 (MQ=255)

                                                                                                                                tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa          >  1:420893/1‑141 (MQ=255)

                                                                                                                                tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa          >  1:724849/1‑141 (MQ=255)

                                                                                                                                tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACCATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa          >  2:948660/1‑141 (MQ=255)

                                                                                                                                  tGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACa        >  1:1003403/1‑141 (MQ=255)

                                                                                                                                    tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa      >  2:865553/1‑141 (MQ=255)

                                                                                                                                    tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa      <  1:38869/141‑1 (MQ=255)

                                                                                                                                    tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa      <  2:246825/141‑1 (MQ=255)

                                                                                                                                        taataataataaAGGAGTAAGACAATGGAAAAATCGATCAAAAGAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCGTCAGGTGTAATGACTACAGAtgtg  <  2:765889/141‑1 (MQ=255)

AAGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGATGTG  >  CP000730/353557‑353833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.