BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	CP000730	353,691	Δ3 bp	5.7%	intergenic (+127/‑24)	USA300HOU_0322 → / → USA300HOU_0323	hypothetical protein/hypothetical membrane protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	353694 =	89 (1.000)	5 (0.060)	5/236	NT	5.7%	intergenic (+130/‑23)	USA300HOU_0322/USA300HOU_0323	hypothetical protein/hypothetical membrane protein
*	?	CP000730	= 353690	85 (1.050)	5 (0.060)	5/236	NT	5.7%	intergenic (+126/‑27)	USA300HOU_0322/USA300HOU_0323	hypothetical protein/hypothetical membrane protein

Only 100 of 103 total aligned reads displayed.

AAAAAGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGA  >  CP000730/353554‑353829

aaaaaGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATATATATATAAGAACACAAACGCAAGTTTGTAaata                                                                                                                                         <  1:1007571‑M2/141‑5 (MQ=255)

  aaaGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataat                                                                                                                                       >  2:263354‑M2/1‑135 (MQ=255)

  aaaGATTAACATAGGCTTTCTTTAAAACTTTTAAACAGATTAAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataat                                                                                                                                       >  2:548259‑M2/1‑135 (MQ=255)

   aaGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataata                                                                                                                                      >  2:1010434‑M2/1‑134 (MQ=255)

     gATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataat                                                                                                                                    >  1:735726‑M2/1‑132 (MQ=255)

      aTTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataata                                                                                                                                   <  2:68701‑M2/141‑11 (MQ=255)

        tAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataataat                                                                                                                                 >  2:637033/1‑141 (MQ=255)

        tAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataataat                                                                                                                                 >  2:329407/1‑141 (MQ=255)

         aaCATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATTAATTTAAACATTTATATATAAGAACACAAACGCATGTTTGTAAataataataata                                                                                                                                <  2:1083862/141‑1 (MQ=255)

              aGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGa                                                                                                                           <  2:476760/141‑1 (MQ=255)

                  tttctttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAaataataataaaggagtaagtc                                                                                                                       <  2:126495‑M2/141‑23 (MQ=255)

                   ttctttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATGATAATAAAGGAGTAAg                                                                                                                      <  2:502016/141‑1 (MQ=255)

                      tttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTATTAAAATAAAAAAGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGaaaaaaaaa                                                                                                                   <  2:397977/141‑9 (MQ=255)

                       ttAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAaataataataaaggagtaagtcaatgg                                                                                                                  >  2:525842‑M2/1‑114 (MQ=255)

                       ttAAAACTTTTAACCAGTCTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACaa                                                                                                                  <  1:582447/141‑1 (MQ=255)

                        tAAAACTTTTAACCAGGTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAGCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAAt                                                                                                                 <  1:790169/141‑1 (MQ=255)

                               tttAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGaaaaa                                                                                                          <  2:391250/141‑1 (MQ=255)

                                ttAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAaataataataaaggagtaagacaatggaaaaatcga                                                                                                         <  1:450387‑M2/141‑37 (MQ=255)

                                ttAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAAt                                                                                                         <  1:976029/141‑1 (MQ=255)

                                  aaCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCg                                                                                                       <  1:729532/141‑1 (MQ=255)

                                   aCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGa                                                                                                      >  2:881182/1‑141 (MQ=255)

                                   aCCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGa                                                                                                      <  2:704324/141‑1 (MQ=255)

                                      aGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCa                                                                                                   <  1:924412/141‑1 (MQ=255)

                                        tttCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCaaa                                                                                                 >  2:90644/1‑141 (MQ=255)

                                         ttCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCaaaa                                                                                                <  2:589092/141‑1 (MQ=255)

                                           cAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTATTTTTTTCACGATATAAATTTAACCATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGAAAGACAATGGAAAAATCGAGCAAaata                                                                                              >  2:540722/1‑141 (MQ=255)

                                           cAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaata                                                                                              >  1:995107/1‑141 (MQ=255)

                                             aaaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaataat                                                                                            >  1:793705/1‑141 (MQ=255)

                                             aaaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAaataat                                                                                            >  1:578532/1‑141 (MQ=255)

                                              aaaGTGAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTGTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATg                                                                                           <  2:540041/141‑1 (MQ=255)

                                              aaaGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATg                                                                                           >  2:679721/1‑141 (MQ=255)

                                                    aaTGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAAAGCAAGAATGTAACTAATAACACTAACGGAGTAACAAAATGGAAAACTTGATAAAAATAATGACaata                                                                                     >  1:915019/1‑141 (MQ=255)

                                                     aTGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataa                                                                                    >  2:411463/1‑141 (MQ=255)

                                                      tGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataat                                                                                   >  2:928632/1‑141 (MQ=255)

                                                      tGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACaataat                                                                                   >  1:302697/1‑141 (MQ=255)

                                                       gAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATAGATCAAAATAATGACAataata                                                                                  >  1:14981/1‑141 (MQ=255)

                                                         gCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAgg                                                                                >  1:135182/1‑141 (MQ=255)

                                                          cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                               <  2:901824/141‑1 (MQ=255)

                                                          cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                               >  1:324534/1‑141 (MQ=255)

                                                          cTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGa                                                                               >  2:507060/1‑141 (MQ=255)

                                                            ttAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAt                                                                             >  1:360733/1‑141 (MQ=255)

                                                            ttAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAt                                                                             <  2:29233/141‑1 (MQ=255)

                                                              aGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttg                                                                           <  1:1069308/141‑1 (MQ=255)

                                                              aGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttg                                                                           <  1:160564/141‑1 (MQ=255)

                                                               gCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttgt                                                                          >  2:310183/1‑141 (MQ=255)

                                                                cGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAAttgtt                                                                         >  2:559015/1‑141 (MQ=255)

                                                                   cAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTgttgtt                                                                      <  1:815848/141‑1 (MQ=255)

                                                                    aataatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTc                                                                     <  2:122515/141‑1 (MQ=255)

                                                                    aataatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTc                                                                     <  1:379674/141‑1 (MQ=255)

                                                                       aatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAaataataataaaggagtaagtcaatggaaaaatcgatcaaaataatgacaataataggacttgttattcagggtt                                                                  <  1:903122‑M2/141‑76 (MQ=255)

                                                                       aatTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAgg                                                                  >  2:858505/1‑141 (MQ=255)

                                                                           tttAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATAGATCAAAATAATGACAATAATAGGAATTGTTGTTAAGGGttt                                                              >  2:63810/1‑141 (MQ=255)

                                                                             tAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAg                                                            >  1:753532/1‑141 (MQ=255)

                                                                              aaaaTAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAaataataataaaggagtaagtcaatggaaaaatcgatcaaaataatgacaataataggaattgttattcagggtttagcaac                                                           <  2:365681‑M2/141‑83 (MQ=255)

                                                                               aaaTAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAATAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCa                                                          >  2:820866/1‑141 (MQ=255)

                                                                                 tgttcttatatatAAATGTTTAAATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAATAAGACAATGGAAAAATCGAACAAAATAATGACAATAGTAGGAATTGATGTTCAGGGATTataaac                                                        >  2:788973/10‑136 (MQ=255)

                                                                                  tAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGATGTTCAGGGTTTAGCAACg                                                       >  2:341183/1‑141 (MQ=255)

                                                                                     acacGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTa                                                    <  2:412389/141‑1 (MQ=255)

                                                                                     acacGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTa                                                    <  1:699105/141‑1 (MQ=255)

                                                                                          atatAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAg                                               >  2:769581/1‑141 (MQ=255)

                                                                                           tataAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGt                                              >  1:900764/1‑141 (MQ=255)

                                                                                            ataAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGtt                                             >  2:24271/1‑141 (MQ=255)

                                                                                             taAATTTAAACATTTATATATAAGAACACAAACGTAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                            <  1:626716/141‑1 (MQ=255)

                                                                                             taAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                            <  1:776854/141‑1 (MQ=255)

                                                                                             taAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                            <  1:743571/141‑1 (MQ=255)

                                                                                             taAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGttt                                            <  1:941124/141‑1 (MQ=255)

                                                                                               aaTTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTAc                                          <  2:415704/141‑1 (MQ=255)

                                                                                                 tttAAACATTTATATATAAGAACACAACCGCAAGTTTGTAAATAATAATAATAAAATAGTAATATTATGGAAAAATCGATCAAAATATTGACTATAATTTTGATTGTTGTTCAGGTTATAGCCACCGTATTTAGTTTACTa                                        <  2:368803/141‑1 (MQ=255)

                                                                                                  ttAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTAt                                       <  2:422482/141‑1 (MQ=255)

                                                                                                     taaaTTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGa                                    >  1:804253/4‑141 (MQ=255)

                                                                                                       cATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATg                                  <  1:1023270/141‑1 (MQ=255)

                                                                                                       cATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATg                                  >  1:453888/1‑141 (MQ=255)

                                                                                                         tttATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGt                                <  2:12365/141‑1 (MQ=255)

                                                                                                         tttATATATAAGAACAAAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGt                                <  2:669739/141‑1 (MQ=255)

                                                                                                           tatatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGttt                              <  2:432784/141‑1 (MQ=255)

                                                                                                            atatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGtttt                             <  1:858154/141‑1 (MQ=255)

                                                                                                             tatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTa                            <  2:202523/141‑1 (MQ=255)

                                                                                                             tatataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGAAAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGCTGGTTTTa                            <  2:202803/141‑1 (MQ=255)

                                                                                                              atataAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTag                           <  2:715930/141‑1 (MQ=255)

                                                                                                                    gAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCAt                     <  2:395281/141‑1 (MQ=255)

                                                                                                                     aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCAtt                    >  2:559123/1‑140 (MQ=255)

                                                                                                                     aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATc                    >  2:189237/1‑141 (MQ=255)

                                                                                                                     aaCACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATc                    <  1:330826/141‑1 (MQ=255)

                                                                                                                       cacaAACGCGAGTTTGTAAATAATTATAATGAAGGAGTAAGACAAGGGAAAAATCGGTCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCGGCATCAg                  <  2:624443/141‑1 (MQ=255)

                                                                                                                        acaAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAgg                 <  2:153422/141‑1 (MQ=255)

                                                                                                                         caAACGCAAGTTTGTAAATAATAATAATACAGGATTAAGACAATGGACAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTGCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAACATCAGgt                >  2:299979/1‑141 (MQ=255)

                                                                                                                         caAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAggg                >  1:843713/1‑140 (MQ=255)

                                                                                                                         caAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGgt                >  2:525078/1‑141 (MQ=255)

                                                                                                                           aacttgcgTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGgtgt              >  2:514325/8‑141 (MQ=255)

                                                                                                                                 aGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGAc        <  1:619408/141‑1 (MQ=255)

                                                                                                                                 aGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGAAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATAAGGTGTAATGaa        >  2:583175/1‑140 (MQ=255)

                                                                                                                                   tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTNATGACTa      >  2:814909/1‑141 (MQ=255)

                                                                                                                                   tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa      >  1:420893/1‑141 (MQ=255)

                                                                                                                                   tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa      >  1:724849/1‑141 (MQ=255)

                                                                                                                                   tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa      >  1:667731/1‑141 (MQ=255)

                                                                                                                                   tttGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACCATTGATGGTTTTAGCAGCATCAGGTGTAATGACTa      >  2:948660/1‑141 (MQ=255)

                                                                                                                                     tGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACa    >  1:1003403/1‑141 (MQ=255)

                                                                                                                                       tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa  <  2:246825/141‑1 (MQ=255)

                                                                                                                                       tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa  >  2:865553/1‑141 (MQ=255)

                                                                                                                                       tAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGa  <  1:38869/141‑1 (MQ=255)

AAAAAGATTAACATAGGCTTTCTTTAAAACTTTTAACCAGTTTCAAAAAGTAAATGAGCTTTAGCGACAATAATTTTTAAAATAAACACGATATAAATTTAAACATTTATATATAAGAACACAAACGCAAGTTTGTAAATAATAATAATAAAGGAGTAAGACAATGGAAAAATCGATCAAAATAATGACAATAATAGGAATTGTTGTTCAGGGTTTAGCAACGGTATTTAGTTTACTATTGATGGTTTTAGCAGCATCAGGTGTAATGACTACAGA  >  CP000730/353554‑353829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.