BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2248208 =	83 (0.940)	6 (0.070)	6/248	NT	7.2%	intergenic (+2/+128)	coaA/USA300HOU_2120	possible pantothenate kinase/hypothetical protein
*	?	CP000730	2248263 =	74 (0.870)	6 (0.070)	6/248	NT	7.2%	intergenic (+57/+73)	coaA/USA300HOU_2120	possible pantothenate kinase/hypothetical protein

Only 100 of 106 total aligned reads displayed.

TATCGGTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGTAAGT  >  CP000730/2248068‑2248348

tttaaaaactggcgtggttggtacaattgtttcagcgcaaaaattgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaata                                                                                                                                              >  1:732304‑M1/141‑141 (MQ=255)

tatCGGTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTtagaaaaatagaa                                                                                                                                              <  1:861199/141‑1 (MQ=255)

tatCGGTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTtagaaaaatagaa                                                                                                                                              <  1:134319/141‑1 (MQ=255)

  tCGGTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTtagaaaaatagaaaa                                                                                                                                            >  2:312739/1‑141 (MQ=255)

   aaaaactggcgtggttggtacaattgtttcagcgcaaaaattgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaataaaa                                                                                                                                           <  2:927870‑M1/4‑1 (MQ=255)

   aaaaactggcgtggttggtacaattgtttcagcgcaaaaattgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaataaaa                                                                                                                                           <  1:816422‑M1/4‑1 (MQ=255)

    ggTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCCGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAg                                                                                                                                          >  1:737531/1‑141 (MQ=255)

    ggTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAg                                                                                                                                          >  2:391430/1‑141 (MQ=255)

    aaaactggcgtggttggtacaattgtttcagcgcaaaaattgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAg                                                                                                                                          <  2:632140‑M1/5‑1 (MQ=255)

     gTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGa                                                                                                                                         <  1:618804/141‑1 (MQ=255)

         tggcgcggttggtacaattgtttcagcgcaaaaattgtctaatgaactcaccttttaattgcattgcgttgtaagtaattaagtgataataaatggaacaaaacgcattcaaaacacttaaacaataaaatacaaagcaaa                                                                                                                                     <  2:22362‑M1/10‑10 (MQ=255)

          tcatttcatAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCAtt                                                                                                                                    <  1:847284/141‑1 (MQ=255)

             tttcatAATAACTCTTTATTACGCAAAGTTGTTGAATATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTtat                                                                                                                                 <  2:420185/141‑1 (MQ=255)

             tttcatAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTtat                                                                                                                                 >  1:19926/1‑141 (MQ=255)

             tttcatAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTtat                                                                                                                                 >  2:869025/1‑141 (MQ=255)

               tcatAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTatat                                                                                                                               >  1:907538/1‑141 (MQ=255)

                  taataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGGTAAATAGAAAAAGACCATTTATATgcg                                                                                                                            <  1:13775/141‑1 (MQ=255)

                  taataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATgcg                                                                                                                            >  1:104814/1‑141 (MQ=255)

                  taataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATgcg                                                                                                                            >  2:250229/1‑141 (MQ=255)

                  taataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATAAAAAAAAAAATAGAAAAAGACCATTTATATgcg                                                                                                                            <  2:238643/141‑1 (MQ=255)

                    ataaCGCTTTATTACGCNAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGcgcg                                                                                                                          >  1:721167/1‑141 (MQ=255)

                    ataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGcgcg                                                                                                                          <  1:707313/141‑1 (MQ=255)

                    ataaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGGTGCAAACCATACTATGTCGAAAACGGCGCATTTTAAGGTGCTATTGGTGCATTATATAAAAAAAAAAAGAAAAAGACCATTTATATGcgcg                                                                                                                          <  2:287580/141‑1 (MQ=255)

                      aaCGCTTTATTACGCAAAGTTGTGGAAGATTATATTGGGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCgtt                                                                                                                        <  2:53657/141‑1 (MQ=255)

                      aaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGGTAAATAGAAAAAGACCATTTATATGCGCgtt                                                                                                                        >  1:960942/1‑141 (MQ=255)

                      aaCGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCgtt                                                                                                                        >  1:814154/1‑141 (MQ=255)

                        cGCATTATTACGCAAAGTTGTGGAAGACTATACTGGGTTACGCGGTTGCAGACCGTACTAGGGGGAAAACGGCGCATTTTCAGGTGCTAGGGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCgttgt                                                                                                                      >  2:643618/1‑141 (MQ=255)

                         gCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCgttgtt                                                                                                                     >  2:331186/1‑141 (MQ=255)

                         gCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCACTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCgttgtt                                                                                                                     >  1:22362/1‑141 (MQ=255)

                         gCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGGTAGGCGGTTGCAAGCCGGACTATGTTGAAAACGGCGCATGTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCGTTTATATGCGCgttgtt                                                                                                                     >  2:542868/1‑141 (MQ=255)

                           tttATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAAATGTACTATGTTGAAAACGGCGCCTTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGtttt                                                                                                                   >  2:21212/1‑141 (MQ=255)

                               ttaCGCATAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTtaaat                                                                                                               <  1:177825/141‑1 (MQ=255)

                                 aCGCAAAGTTGTGGAAGATTATACTGTGTTACTCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTtaaataa                                                                                                             <  2:369023/141‑1 (MQ=255)

                                    cAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACg                                                                                                          >  1:997404/1‑141 (MQ=255)

                                     aaaGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGc                                                                                                         <  1:989126/141‑1 (MQ=255)

                                         aattgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCtata                                                                                                     >  2:567019‑M1/100‑141 (MQ=255)

                                           ttgtctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCtatata                                                                                                   >  2:161032‑M1/98‑141 (MQ=255)

                                           gtgGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCtatata                                                                                                   >  1:526845/1‑141 (MQ=255)

                                              tctaatgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAAt                                                                                                >  1:458997‑M1/95‑141 (MQ=255)

                                                aGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATgg                                                                                              <  1:262414/141‑1 (MQ=255)

                                                 gATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGc                                                                                             <  2:493152/141‑1 (MQ=255)

                                                  atgaacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGcc                                                                                            >  2:821383‑M1/91‑141 (MQ=255)

                                                  aTTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGcc                                                                                            <  1:200182/141‑1 (MQ=255)

                                                   ttATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCt                                                                                           <  1:961752/141‑1 (MQ=255)

                                                    tataCTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCtt                                                                                          <  1:1014359/141‑1 (MQ=255)

                                                     ataCTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttt                                                                                         <  2:19926/141‑1 (MQ=255)

                                                     ataCTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTAAGGTGCTATTGGTGCATTATATTTAAAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttt                                                                                         <  2:501698/141‑1 (MQ=255)

                                                     aacttacattttaattgaattgagttgtaagtaattaagtgataataaatggaacaatacgtattcaaaacacttagaccataaaatAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttt                                                                                         >  1:678442‑M1/88‑141 (MQ=255)

                                                       aCTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAACAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCtttta                                                                                       >  2:246145/1‑141 (MQ=255)

                                                         tgtgTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttttatt                                                                                     <  1:463019/141‑1 (MQ=255)

                                                         tgtgTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttttatt                                                                                     <  1:463127/141‑1 (MQ=255)

                                                           tgtTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCttttatttt                                                                                   <  1:665490/141‑1 (MQ=255)

                                                                 gcgGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTc                                                                             <  1:562514/141‑1 (MQ=255)

                                                                   ggTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTa                                                                           >  2:861139/1‑141 (MQ=255)

                                                                        cAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAgtgt                                                                      <  2:1077088/141‑1 (MQ=255)

                                                                          aaCCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGGCCATTTATGTGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGttt                                                                    <  2:611080/141‑1 (MQ=255)

                                                                          aaCCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCAATAAATAAAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGttt                                                                    <  2:536347/141‑1 (MQ=255)

                                                                          aaCCGTACTATGTTGAAAACGGCGCATTGTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGttt                                                                    >  2:363069/1‑141 (MQ=255)

                                                                              gTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGaa                                                                >  2:934836/1‑141 (MQ=255)

                                                                              gTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGaa                                                                <  2:616284/141‑1 (MQ=255)

                                                                              gTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGaa                                                                >  1:632140/1‑141 (MQ=255)

                                                                                  tATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTTTTTTTTTTTTTTATTGTTTTGAATTCg                                                            >  2:919965/1‑141 (MQ=255)

                                                                                  tATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACg                                                            >  1:497520/1‑141 (MQ=255)

                                                                                  tATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACg                                                            >  2:468300/1‑141 (MQ=255)

                                                                                  tATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACg                                                            >  2:148998/1‑141 (MQ=255)

                                                                                      ttGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTAtt                                                        >  1:639996/1‑141 (MQ=255)

                                                                                        gAAAACGGCGCATTTTCAGGTGCTATTAGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGt                                                      <  2:829750/141‑1 (MQ=255)

                                                                                           aaCGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTcc                                                   <  2:925663/141‑1 (MQ=255)

                                                                                             cGGCGCATTTTCAGGTGCTATTGATGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCAt                                                 <  2:863019/141‑1 (MQ=255)

                                                                                              ggCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCAtt                                                <  2:75873/141‑1 (MQ=255)

                                                                                               gcgcATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCAttt                                               >  2:308230/1‑141 (MQ=255)

                                                                                                 gcATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATCAACGCTATCTAAATGGCTTTTTATCTCATGCTATAAGTGTTTTGAATAAGTATTGTTCCATttat                                             >  1:98998/1‑141 (MQ=255)

                                                                                                 gcATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATttat                                             >  1:324238/1‑141 (MQ=255)

                                                                                                  cATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATttatt                                            >  2:516400/1‑141 (MQ=255)

                                                                                                   aTTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATttatta                                           <  2:942960/141‑1 (MQ=255)

                                                                                                         aGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACtt                                     <  2:969818/141‑1 (MQ=255)

                                                                                                          ggTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTa                                    >  1:1066244/1‑141 (MQ=255)

                                                                                                          ggTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTa                                    >  2:783149/1‑141 (MQ=255)

                                                                                                             gCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAAtt                                 >  1:927870/1‑141 (MQ=255)

                                                                                                              cTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAAtta                                <  1:222559/141‑1 (MQ=255)

                                                                                                                 ttgtttcATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATCTAAATGGCCTTTTATTGTATAGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTAAAttactt                             <  2:634185/135‑1 (MQ=255)

                                                                                                                  tGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAAttactta                            >  2:635050/1‑141 (MQ=255)

                                                                                                                  tGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAAttactta                            >  2:423204/1‑141 (MQ=255)

                                                                                                                    gTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACa                          <  2:907538/141‑1 (MQ=255)

                                                                                                                      gCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAAc                        <  2:483234/141‑1 (MQ=255)

                                                                                                                       cATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACt                       <  1:398197/141‑1 (MQ=255)

                                                                                                                          tataTTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACtcaa                    <  1:923960/141‑1 (MQ=255)

                                                                                                                           atatTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACtcaat                   <  1:768615/141‑1 (MQ=255)

                                                                                                                             atTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACtcaattc                 >  2:759514/1‑141 (MQ=255)

                                                                                                                              tttAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACtcaattca                >  2:886828/1‑141 (MQ=255)

                                                                                                                              tatagaaaaatagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACtcaattca                >  2:60939/3‑141 (MQ=255)

                                                                                                                                  gaaaaatagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTa            >  2:769531/1‑141 (MQ=255)

                                                                                                                                   aaaaatagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTaa           >  2:418030/1‑141 (MQ=255)

                                                                                                                                     aaatagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAATCACTAGATAAGTTGCGGTGTATGTTAGTGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTaaaa         <  1:915504/141‑1 (MQ=255)

                                                                                                                                        tagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAATTGTCCTTCTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTACATTTATTATCACTTAATTACTTACAACTCAATTCATTTaaattct      >  2:771699/1‑137 (MQ=255)

                                                                                                                                        tagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGt      >  2:251318/1‑141 (MQ=255)

                                                                                                                                        tagaaaaaGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGt      >  2:369887/1‑141 (MQ=255)

                                                                                                                                            AAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGTAAGt  <  1:663144‑M1/141‑1 (MQ=255)

                                                                                                                                            AAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGTAAGt  <  2:367914‑M1/141‑1 (MQ=255)

                                                                                                                                            AAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGTAAGt  <  1:366615‑M1/141‑1 (MQ=255)

TATCGGTTCTTCATTTCATAATAACGCTTTATTACGCAAAGTTGTGGAAGATTATACTGTGTTACGCGGTTGCAAACCGTACTATGTTGAAAACGGCGCATTTTCAGGTGCTATTGGTGCATTATATTTAGAAAAATAGAAAAAGACCATTTATATGCGCGTTGTTTTAAATAAACGCTATATAAATGGCCTTTTATTTTATGGTCTAAGTGTTTTGAATACGTATTGTTCCATTTATTATCACTTAATTACTTACAACTCAATTCAATTAAAATGTAAGT  >  CP000730/2248068‑2248348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.