BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2661788 =	88 (0.990)	5 (0.060)	5/226	NT	6.8%	intergenic (‑181/‑140)	USA300HOU_2514/USA300HOU_2515	HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein
*	?	CP000730	2661832 =	60 (0.770)	5 (0.060)	5/226	NT	6.8%	intergenic (‑225/‑96)	USA300HOU_2514/USA300HOU_2515	HAD superfamily hydrolase/ABC superfamily ATP binding cassette transporter, ABC protein

Only 100 of 114 total aligned reads displayed.

TCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTA  >  CP000730/2661648‑2661924

tCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGTACATAAATTTCAGAATATTGTaaaaa                                                                                                                                            >  2:858163/1‑141 (MQ=255)

tCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTaaaaa                                                                                                                                            >  2:1025683/1‑141 (MQ=255)

tCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTaaaaa                                                                                                                                            >  2:645926/1‑141 (MQ=255)

    tctcATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATc                                                                                                                                        >  2:970711/1‑141 (MQ=255)

     tttgtttttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATca                                                                                                                                       <  2:504555‑M1/6‑1 (MQ=255)

     tttgtttttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATca                                                                                                                                       <  1:615036‑M1/6‑1 (MQ=255)

     tttgtttttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATca                                                                                                                                       <  2:431410‑M1/6‑1 (MQ=255)

     tttgtttttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATca                                                                                                                                       <  2:588892‑M1/6‑1 (MQ=255)

     tatgtttttaacttttaaagaatagtaatatagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttataataattctttcacatgatgaatcgatgttataaattactATATca                                                                                                                                       <  2:952977‑M1/6‑1 (MQ=255)

       tgtttttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATcaca                                                                                                                                     >  2:402531‑M1/134‑141 (MQ=255)

       cATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATAGCTTTAATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATcaca                                                                                                                                     >  2:185842/1‑141 (MQ=255)

        aTGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCacac                                                                                                                                    <  2:545296/141‑1 (MQ=255)

         tGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGTACATAAATTTCAGAATATTGTAAAAATATCACACt                                                                                                                                   >  2:949939/1‑141 (MQ=255)

           tttaacttttaaagaatagttatttcgtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACtat                                                                                                                                 >  1:945347‑M1/130‑141 (MQ=255)

           tttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACtat                                                                                                                                 >  2:507739‑M1/130‑141 (MQ=255)

           tttaacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACtat                                                                                                                                 <  1:653186‑M1/12‑1 (MQ=255)

           tttaacttttaaagaatagatatttagtttaatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtattcttaaaaattctttcacattatgtatagctgttataaattagtATATCACACtat                                                                                                                                 <  2:862150‑M1/12‑1 (MQ=255)

           aCAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACtat                                                                                                                                 >  1:517050/1‑141 (MQ=255)

            cAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACtata                                                                                                                                >  1:719249/1‑141 (MQ=255)

            cAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACtata                                                                                                                                <  1:447211/141‑1 (MQ=255)

            cAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACtata                                                                                                                                <  2:265228/141‑1 (MQ=255)

              aacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACTATAtt                                                                                                                              <  2:478431‑M1/15‑1 (MQ=255)

              aacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATAACACTATAtt                                                                                                                              <  2:293878‑M1/15‑1 (MQ=255)

              aacttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacacagatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACAATATAtt                                                                                                                              <  2:902037‑M1/15‑1 (MQ=255)

              aGCAATGAAGTTGGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAtt                                                                                                                              <  1:412711/141‑1 (MQ=255)

               gCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATACATTTCAGAATATTGTAAAAATATCACACTATAttt                                                                                                                             <  1:947299/141‑1 (MQ=255)

               gCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAttt                                                                                                                             >  1:151586/1‑141 (MQ=255)

               acttttaaagaatagttatttagtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACTATAttt                                                                                                                             >  1:818161‑M1/126‑141 (MQ=255)

               acttcattgcttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATAttt                                                                                                                             >  2:571089/11‑141 (MQ=255)

                     aaGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCAtt                                                                                                                       <  1:355844/141‑1 (MQ=255)

                        tttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAg                                                                                                                    >  1:1026862/1‑141 (MQ=255)

                         ttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGa                                                                                                                   <  1:445575/141‑1 (MQ=255)

                         ttGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGa                                                                                                                   >  1:502504/1‑141 (MQ=255)

                            tCATACCACAATGAACCTATATACACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAAAAAAAAAAAAAAATATCACACTATATTTATCATTTAGA‑Ca‑a                                                                                                              <  2:766881/141‑1 (MQ=255)

                              tccccACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑Ca‑aaa                                                                                                            <  1:163686/138‑1 (MQ=255)

                              aTACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑Ca‑aaa                                                                                                            >  1:94907/1‑141 (MQ=255)

                                aCCACATTGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAata                                                                                                          <  2:404083/141‑1 (MQ=255)

                                 ccACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGAAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAatat                                                                                                         >  1:272682/1‑141 (MQ=255)

                                    caATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAgt                                                                                                      >  1:771787/1‑141 (MQ=255)

                                    agtttcatgtatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACTATATTTATCATTTAGA‑CA‑AAATATAgt                                                                                                      >  1:687767‑M1/105‑141 (MQ=255)

                                       tGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGtgtg                                                                                                   >  2:936789/1‑141 (MQ=255)

                                       tGAACCTATATTCACATTTTGAAAATGCTTTCATATATGAAAAAACCATTCAACAGGTTATCACCTTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATAACACTATATTTATCATTTAGA‑CA‑ACATACAGtgtg                                                                                                   >  2:1033177/1‑141 (MQ=255)

                                        gAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGa                                                                                                  >  2:500349/1‑141 (MQ=255)

                                        gAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGa                                                                                                  >  2:206690/1‑141 (MQ=255)

                                          aCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTTTAAAAATATCACACTATATTTATCATTTAGA‑TA‑AAATATAGTGTGata                                                                                                >  1:289215/1‑141 (MQ=255)

                                          aCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGata                                                                                                >  2:969077/1‑141 (MQ=255)

                                          aCCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGata                                                                                                >  1:812402/1‑141 (MQ=255)

                                            ttattTTTACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGAtata                                                                                              >  2:807421/2‑141 (MQ=255)

                                            cTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGAtata                                                                                              <  1:473362/141‑1 (MQ=255)

                                            cTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGAtata                                                                                              <  1:217133/141‑1 (MQ=255)

                                             tatacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATAc                                                                                             >  1:994147‑M1/96‑141 (MQ=255)

                                              atatTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACt                                                                                            <  1:1079286/141‑1 (MQ=255)

                                              atatTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACt                                                                                            <  1:63386/141‑1 (MQ=255)

                                               tacaactcctatgtataaagggatttattacaccgatatttaattgtatttttaaaaattctttcacattatgtatagatgttataaattagtATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTa                                                                                           >  1:824359‑M1/94‑141 (MQ=255)

                                                   cacaTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAAttt                                                                                       >  2:1050031/1‑141 (MQ=255)

                                                      aTTTTGAAATTGCTTTCATATATGCAAAACTCATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATGtata                                                                                    >  1:222576/1‑141 (MQ=255)

                                                      aTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTtata                                                                                    >  1:248584/1‑141 (MQ=255)

                                                      aTTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTtata                                                                                    <  1:942137/141‑1 (MQ=255)

                                                             aaTTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCta                                                                             >  2:293657/1‑141 (MQ=255)

                                                              aTTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCtat                                                                            <  1:235403/141‑1 (MQ=255)

                                                              aTTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTAAAAAAAAAAAAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCtat                                                                            <  2:827729/141‑1 (MQ=255)

                                                               ttGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCtata                                                                           >  2:932430/1‑141 (MQ=255)

                                                                tGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATAc                                                                          <  1:733145/141‑1 (MQ=255)

                                                                 tttttCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAATATTTCTCTCTTTATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACa                                                                         >  2:178054/3‑141 (MQ=255)

                                                                     tCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATact                                                                     <  2:332137/141‑3 (MQ=255)

                                                                     tCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAAt                                                                     >  1:982648/1‑141 (MQ=255)

                                                                       atatatGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAAtgt                                                                   >  1:957707/1‑141 (MQ=255)

                                                                          tatGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaa                                                                >  2:645625/1‑141 (MQ=255)

                                                                            tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGaaaa                                                              >  2:22043/1‑140 (MQ=255)

                                                                            tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAg                                                              >  1:417415/1‑141 (MQ=255)

                                                                            tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAg                                                              >  2:474519/1‑141 (MQ=255)

                                                                            tGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAg                                                              >  2:938542/1‑141 (MQ=255)

                                                                              cAACACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGaa                                                            >  2:465454/1‑141 (MQ=255)

                                                                              cAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGaa                                                            <  1:44389/141‑1 (MQ=255)

                                                                                aaaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAtt                                                          <  1:471732/141‑1 (MQ=255)

                                                                                 aaCACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttt                                                         >  1:81273/1‑141 (MQ=255)

                                                                                   cacaTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAAttttt                                                       >  2:537948/1‑141 (MQ=255)

                                                                                    ccattctacTTGATATAGCATTCAGTGACAAACATAAATATAAGGATATTGTAAAAATCTCACACTAATTATTTCATTTAGT‑CT‑TACTAGAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTa                                                      <  2:271134/134‑1 (MQ=255)

                                                                                      aTTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAACTTTTaaa                                                    <  1:858656/141‑1 (MQ=255)

                                                                                         acacTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAAt                                                 >  1:787067/1‑141 (MQ=255)

                                                                                            cTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTT‑T‑GTCTAAATGATAAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAGAAGTACa                                              >  2:313809/1‑141 (MQ=25)

                                                                                              ggATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAAt                                            <  2:517050/141‑1 (MQ=255)

                                                                                               gATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAAtt                                           >  2:825342/1‑141 (MQ=255)

                                                                                                   aaGCATTCAGAGGCAAACATAAATTTCATAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTAATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAat                                       <  2:808483/140‑1 (MQ=255)

                                                                                                      cATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATc                                    >  1:251661/1‑141 (MQ=255)

                                                                                                             agGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaa                             >  1:535894/1‑141 (MQ=255)

                                                                                                             agGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaa                             >  1:33849/1‑141 (MQ=255)

                                                                                                             agGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaa                             >  1:151088/1‑141 (MQ=255)

                                                                                                               gCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGtaata                           <  1:775222/141‑1 (MQ=255)

                                                                                                                  aaCATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAAt                        <  2:607705/141‑1 (MQ=255)

                                                                                                                    cATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATca                      >  2:771358/1‑140 (MQ=255)

                                                                                                                        aaTTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCttt                  >  2:615036/1‑141 (MQ=255)

                                                                                                                         atagatgttataaattattATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATCTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTta                 >  1:14781‑M1/20‑141 (MQ=255)

                                                                                                                         atagatgttataaattagtATATCACACTATATTTTGTCTAAATG‑AT‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTta                 >  2:14781‑M1/20‑141 (MQ=255)

                                                                                                                               gAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATa           <  1:550275/141‑1 (MQ=255)

                                                                                                                                   atTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAg       <  1:127022/141‑1 (MQ=255)

                                                                                                                                    ttGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACaactccta      <  1:532584/141‑8 (MQ=255)

                                                                                                                                    ttGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAAGTAATTATCGGTGTAATAAATCCCTTTATACATAGGAGt      <  2:1026862/141‑1 (MQ=255)

                                                                                                                                       tAAAAATATAACGATATATTTATCATTTGGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAAAATTTTT‑AAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGta  <  2:461078/141‑1 (MQ=255)

                                                                                                                                        aaaaaTATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGta  >  1:1069746/1‑141 (MQ=255)

TCCATCTCATGACAAGCAATGAAGTTTGTCATACCACAATGAACCTATATTCACATTTTGAAATTGCTTTCATATATGCAAAACACATTACACTGGATATAGCATTCAGAGGCGAACATAAATTTCAGAATATTGTAAAAATATCACACTATATTTATCATTTAGA‑CA‑AAATATAGTGTGATATACTAATTTATAACATCTATACATAATGTGAAAGAATTTTTAAAAATACAATTAAATATCGGTGTAATAAATCCCTTTATACATAGGAGTTGTA  >  CP000730/2661648‑2661924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.