New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885389	50 (0.560)	5 (0.060)	4/232	NT	9.3%	intergenic (+18/+55)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter
	?	CP000730	= 885408	52 (0.650)					intergenic (+37/+36)	gpmA1/yisU	phosphoglycerate mutase/LysE family L‑lysine exporter

AGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGTTTTA  >  CP000730/885269‑885546                                                                                                                                             |                                                                                                                                           aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                                           <  2:509538‑M2/141‑2 (MQ=255) aGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTt                                                                                                                                           <  1:201736‑M2/141‑2 (MQ=255)      aaGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtata                                                                                                                                      >  2:251907‑M2/1‑135 (MQ=255)      aaGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAAGATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtata                                                                                                                                      >  1:117008‑M2/1‑135 (MQ=255)           ttAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgct                                                                                                                                 >  1:600750‑M2/1‑130 (MQ=255)             aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtatcacgcttt                                                                                                                               >  1:861038‑M2/1‑128 (MQ=255)             aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgcttt                                                                                                                               <  2:838675‑M2/141‑14 (MQ=255)             aaaGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgcttt                                                                                                                               >  1:171107‑M2/1‑128 (MQ=255)               aGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTGGTGTTAATTGGTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTa                                                                                                                             >  1:648155/1‑141 (MQ=255)                   taataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAAt                                                                                                                         >  1:352830/1‑141 (MQ=255)                    aataTCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACAAAAGACATACTTGTGTCTATgtataacgctttatttatt                                                                                                                         >  1:420072‑M2/1‑122 (MQ=255)                          ggTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTa                                                                                                                  >  1:241905/1‑141 (MQ=255)                             aaTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACAt                                                                                                               <  2:383367/141‑1 (MQ=255)                              aTTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATa                                                                                                              >  1:441256/1‑141 (MQ=255)                                tGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCGTTTTTATAACGCTTTTAAAATACAACTACATAAc                                                                                                            <  1:303964/141‑1 (MQ=255)                                    atatCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCtt                                                                                                        >  1:48795/1‑141 (MQ=255)                                     tatCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCttt                                                                                                       <  2:611765/141‑1 (MQ=255)                                       tCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAg                                                                                                     <  1:288562/141‑1 (MQ=255)                                        ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                                    <  1:595228/141‑1 (MQ=255)                                        ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                                    <  1:148353/141‑1 (MQ=255)                                        ccTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGa                                                                                                    <  1:119293/141‑1 (MQ=255)                                           gAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGaata                                                                                                 <  1:174170/141‑1 (MQ=255)                                                 tGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAAtt                                                                                           >  2:156/1‑141 (MQ=255)                                                 tGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAAtt                                                                                           >  1:1034440/1‑141 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                                         >  2:200555/1‑141 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                                         >  1:592270/1‑141 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                                         >  2:97084/1‑141 (MQ=255)                                                   aaTATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGa                                                                                         >  2:1079417/1‑141 (MQ=255)                                                    atacGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATACAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGaa                                                                                        >  2:336011/1‑141 (MQ=255)                                                              ggAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTg                                                                              >  1:62517/1‑141 (MQ=255)                                                               gAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTACGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGt                                                                             <  1:478030/141‑1 (MQ=255)                                                                 aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATCAAACTCGAATAAGTTTTTGTaa                                                                           >  1:825790/1‑141 (MQ=255)                                                                 aCATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTaa                                                                           >  1:512682/1‑141 (MQ=255)                                                                   aTTTAAATTTGTTGAGTTAATTGCTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATAAAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAata                                                                         <  2:648155/141‑1 (MQ=255)                                                                         aTTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATAtcatca                                                                   >  1:107937/1‑141 (MQ=255)                                                                             gttgAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGc                                                               >  1:345596/1‑141 (MQ=255)                                                                                       ttGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACaataata                                                     <  1:773060/141‑1 (MQ=255)                                                                                          aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                                  <  2:347038/141‑1 (MQ=255)                                                                                          aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                                  >  2:238717/1‑141 (MQ=255)                                                                                          aTCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAatt                                                  >  2:1065384/1‑141 (MQ=255)                                                                                               aaTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATtattat                                             >  2:971367/1‑141 (MQ=255)                                                                                               aaTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATtattat                                             >  2:247683/1‑141 (MQ=255)                                                                                                aTTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATg                                            <  1:770680/141‑1 (MQ=255)                                                                                                  ttATAATAAATAAAGCGTTATACATA‑GAAACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCt                                          <  2:1014309/141‑1 (MQ=255)                                                                                                     taataaATAAAGCGTTATACATA‑GACACCAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTGTGTAATATCATCTGAGGAACAATAATAATTATTATGCTTGa                                       <  2:652582/141‑1 (MQ=255)                                                                                                     taataaATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGa                                       <  2:251809/141‑1 (MQ=255)                                                                                                       ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                                     <  2:119967/141‑1 (MQ=255)                                                                                                       ataaataaAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGata                                     >  1:344365/1‑141 (MQ=255)                                                                                                            taaaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTa                                >  1:714156/1‑141 (MQ=255)                                                                                                              aaGCGTTATACATA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgcttta                              <  2:233736‑M2/141‑111 (MQ=255)                                                                                                              aaGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTAtt                              <  2:794837/141‑1 (MQ=255)                                                                                                                    tataCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGattat                        <  1:620063/141‑1 (MQ=255)                                                                                                                     ataCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGattatt                       >  1:558578/1‑141 (MQ=255)                                                                                                                      taCATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTg                      <  2:394493/141‑1 (MQ=255)                                                                                                                         aTA‑GACACAAGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatct                   <  2:384428‑M2/141‑122 (MQ=255)                                                                                                                             gACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTtaata                <  1:677324/141‑1 (MQ=255)                                                                                                                              acacAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTtaataa               <  1:301265/141‑1 (MQ=255)                                                                                                                                  aaGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAAtttt           >  2:227218/1‑141 (MQ=255)                                                                                                                                   aGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatctagtttaagg          <  1:517236‑M2/141‑131 (MQ=255)                                                                                                                                   aGTATGTCTTTtgtataacgctttatttattataaatttggatcaattaactcaacaaatttaaatgttccattgtcatattcaaatttcaggatattacaattaccgatattatgctttaatgcttcatctagtttaagg          <  1:192785‑M2/141‑131 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTc          >  2:2119/1‑141 (MQ=255)                                                                                                                                   aGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTc          >  1:134995/1‑141 (MQ=255)                                                                                                                                    gTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATTATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTcc         >  2:928122/1‑141 (MQ=255)                                                                                                                                     tATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAGCGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCg        >  1:255440/1‑141 (MQ=255)                                                                                                                                       tGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATCTTTTATTGATTATTGTTAATAATTTTCCGGt      <  2:323554/141‑1 (MQ=255)                                                                                                                                        gTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGtt     <  2:686710/141‑1 (MQ=255)                                                                                                                                         tCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGttt    >  2:907148/1‑141 (MQ=255)                                                                                                                                         tCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGgtt    >  1:772139/1‑141 (MQ=255)                                                                                                                                          cTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGtttt   <  1:61173/141‑1 (MQ=255)                                                                                                                                           ttttGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGTTTTa  >  2:198065/1‑141 (MQ=255)                                                                                                                                           ttttGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGTTTTa  >  2:1025638/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                           AGATGAAGCATTAAAGCATAATATCGGTAATTGTAATATCCTGAAATTTGAATATGACAATGGAACATTTAAATTTGTTGAGTTAATTGATCCAAATTTATAATAAATAAAGCGTTATACATA‑GACACAAGTATGTCTTTTGTATAACGCTTTTAAAATACAACTACATAACGCTTTAGAATAATAATTGAATAAGTTTTTGTAATATCATCAGAGCAACAATAATAATTATTATGCTTGATATTTTATTGATTATTGTTAATAATTTTCCGGTTTTA  >  CP000730/885269‑885546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.