New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2543400	83 (0.940)	5 (0.060)	5/240	NT	5.8%	intergenic (+5/‑373)	USA300HOU_2403/hlgC	hypothetical protein/gamma hemolysin component C
	?	CP000730	= 2543418	86 (1.040)					intergenic (+23/‑355)	USA300HOU_2403/hlgC	hypothetical protein/gamma hemolysin component C

CCTTATAACATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTACAACTG  >  CP000730/2543279‑2543553                                                                                                                                             |                                                                                                                                         ccTTATAACATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAt                                                                                                                                         <  1:558346‑M2/141‑2 (MQ=255)   ttATAACATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAtca                                                                                                                                       <  2:749245‑M2/141‑4 (MQ=255)    tataACATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAtcaa                                                                                                                                      <  1:916068‑M2/141‑5 (MQ=255)         cATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAtcaagttaa                                                                                                                                 <  1:489476‑M2/141‑10 (MQ=255)         cATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAtcaagttaa                                                                                                                                 <  1:489385‑M2/141‑10 (MQ=255)           ttAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTtaata                                                                                                                               >  2:788182/1‑141 (MQ=255)           ttAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTtaata                                                                                                                               <  1:198835/141‑1 (MQ=255)             aaaTTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATaaa                                                                                                                             <  2:515417/141‑1 (MQ=255)                    tttATCGTACATTAAATTTAATAATAATAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACaattaa                                                                                                                      <  2:759576/141‑1 (MQ=255)                     ttATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACaattaat                                                                                                                     >  2:1025451/1‑141 (MQ=255)                     ttATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACaattaat                                                                                                                     <  1:38325/141‑1 (MQ=255)                       aTCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAAttt                                                                                                                   <  2:398353/141‑1 (MQ=255)                       aTCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAAttt                                                                                                                   <  2:153650/141‑1 (MQ=255)                        tCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAAtttt                                                                                                                  >  1:734878/1‑141 (MQ=255)                        tCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAAtttt                                                                                                                  >  1:873251/1‑141 (MQ=255)                          gTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTa                                                                                                                <  2:180973/141‑1 (MQ=255)                          gTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTa                                                                                                                >  2:362553/1‑141 (MQ=255)                            aCATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGa                                                                                                              >  1:965585/1‑141 (MQ=255)                            aCATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGa                                                                                                              >  1:193617/1‑141 (MQ=255)                             cATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGAt                                                                                                             <  1:881139/141‑1 (MQ=255)                              aTTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATg                                                                                                            >  1:22943/1‑141 (MQ=255)                                 aaaTTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGAt                                                                                                         >  2:532718/1‑141 (MQ=255)                                      taataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATtcatc                                                                                                    <  1:42656/141‑1 (MQ=255)                                      taataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATtcatc                                                                                                    <  2:897168/141‑1 (MQ=255)                                      taataataaCAACTGATTCTTATAAAAATAAAGTATAGAACCATAGTAAATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTCAAATAAATATTTTCAAGTTAATAAACAATTAATTTTTAGATGGATtcatc                                                                                                    <  2:1047716/141‑1 (MQ=255)                                       aataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGATAATATTTATTTAAGCTTcaagttaaattgtttcatttgtattatttgtgtatcta                                                                                                     <  2:7630‑M2/141‑39 (MQ=255)                                       aataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTAtcaagttaaattgtttcatttgtattatttgtgtatcta                                                                                                   <  1:7630‑M2/141‑40 (MQ=255)                                        ataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTACTAAACAATTAATTTTGAGATGGATTCATC‑aa                                                                                                 <  2:1087439/141‑1 (MQ=255)                                        ataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑aa                                                                                                 <  1:572283/141‑1 (MQ=255)                                        ataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑aa                                                                                                 <  2:66433/141‑1 (MQ=255)                                        ataataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAA‑TTTTAGATGTATTCATC‑aaa                                                                                                >  1:559245/1‑141 (MQ=255)                                           ataaCAATTGATTTTTATAATAATAAAGTATCGAATCATAGTAGATACACAAATAAAACAAAAAAAACAATCTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTTTTTTTTATATGGATTCATa‑aaaaa                                                                                              <  2:975864/141‑1 (MQ=255)                                           ataaCAACTTATTTTTATAAAAATAAAGTATCGAACCATAGTATATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑aaaaa                                                                                              <  2:888609/141‑1 (MQ=255)                                           ataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑aaaaa                                                                                              >  1:1034829/1‑141 (MQ=255)                                           ataaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑aaaaa                                                                                              <  2:656212/141‑1 (MQ=255)                                            taaCAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAAt                                                                                             <  2:1044967/141‑1 (MQ=255)                                             aacaacTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATc                                                                                            >  2:478548/1‑141 (MQ=255)                                             aacaacTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATA‑AAAAATc                                                                                            <  2:682379/141‑1 (MQ=255)                                               caacTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTT‑GATGAATCCATCTAAAAAttaa                                                                                          <  2:260961/141‑4 (MQ=255)                                                          tataAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACaa                                                                               <  2:203882/141‑1 (MQ=255)                                                          tataAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACaa                                                                               <  2:841653/141‑1 (MQ=255)                                                              aGAATAAAGGATAGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTg                                                                           <  2:328640/141‑1 (MQ=255)                                                                aaTAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTa                                                                         <  1:846593/141‑1 (MQ=255)                                                                 aTAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTAt                                                                        <  2:21515/141‑1 (MQ=255)                                                                   aaaGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTAttt                                                                      <  2:831834/141‑1 (MQ=255)                                                                      gTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTAc                                                                   <  1:470427/141‑1 (MQ=255)                                                                        aTCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACaa                                                                 >  1:829641/1‑141 (MQ=255)                                                                         tCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACaaa                                                                >  2:830196/1‑141 (MQ=255)                                                                         tCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACaaa                                                                >  2:496328/1‑141 (MQ=255)                                                                           aaaCCATAGTAGATACACAAATAATACAAATGAAACACTTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACATTTTGTATTTTACAAACa                                                              <  1:889845/140‑1 (MQ=255)                                                                           aaaCCATAGTAGATACACAAATAATACAAATGAAAAAAGATAACATGA‑AAGCGTAAATAAATATTATCAAGTTAATAAACAATTAAGCGTTAGATGGATTCATC‑AAAAAACGTAAAAAGCACAATTTGTATTTTACAAACa                                                              <  2:795262/140‑1 (MQ=255)                                                                             aCCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACatt                                                            >  2:700475/1‑141 (MQ=255)                                                                                  agtagATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACattaatta                                                       <  1:625124/141‑1 (MQ=255)                                                                                    tagATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGGATTTTACAAACATTAATTaaa                                                     <  1:638123/141‑1 (MQ=255)                                                                                     agATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTaaaa                                                    >  2:309251/1‑141 (MQ=255)                                                                                      gATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTaaaaa                                                   <  1:641690/141‑1 (MQ=255)                                                                                        tACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTAAAA‑AAAAAAAATAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAaaag                                                 <  2:333636/141‑1 (MQ=255)                                                                                            caAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAaaagaaag                                             >  2:922007/1‑141 (MQ=255)                                                                                             aaaTAATACAAATGAAACCATTTACCATGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGc                                            <  2:861021/141‑1 (MQ=255)                                                                                              aataatACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAATTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCa                                           >  2:655801/1‑141 (MQ=255)                                                                                               ataataCAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCaa                                          <  2:507412/141‑1 (MQ=255)                                                                                               ataataCAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCaa                                          >  2:160921/1‑141 (MQ=255)                                                                                               ataataCAAATGAAAAAATTTAACTTGA‑AAACTTAAATAAATATTATCAATTTAATAAACAATTAATTTTTAGAAAAAAAAAAA‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCaa                                          <  2:305481/141‑1 (MQ=255)                                                                                               ataaaaCAAATGAAACAATTTAACTTTA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCACC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCaa                                          <  1:232715/141‑1 (MQ=255)                                                                                                    aCAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGatcc                                     >  1:389977/1‑138 (MQ=255)                                                                                                    aCAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACAt                                     >  1:990032/1‑141 (MQ=255)                                                                                                    aCAAATGAAACAATATAACTAGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACAt                                     <  2:278780/141‑1 (MQ=255)                                                                                                      aaaTGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTc                                   >  2:958062/1‑141 (MQ=255)                                                                                                      aaaTGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTc                                   >  2:932573/1‑141 (MQ=255)                                                                                                           aaaCAATTTAACTTGA‑AAGCTTAAATAAATATTAtcaagttaaattgtttcatttgtattatttgtgtatctactatggttcgatactttattcttataaaaatcagttgttattattaaatttaatgtacgataaaataa                               <  2:202186‑M2/141‑108 (MQ=255)                                                                                                             aCAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAAt                            <  1:1046585/141‑1 (MQ=255)                                                                                                               aaTTTAACTTGA‑AGGCATAAATAAATCTTAtcacgttaaattgtttcatttgtattatttgtgtatctactatgtttcaatactttattcttataaaaataagttgttattattaaatttaatgtacgataaaataattta                           >  2:770688‑M2/1‑30 (MQ=255)                                                                                                               aaTTTAACTTGA‑AAGCTTAAATAAATATTAtcaagttaaattgtttcatttgtattatttgtgtatctactatggttcgatactttattcttataaaaatcagttgttattattaaatttaatgtacgataaaataattta                           <  1:773127‑M2/141‑112 (MQ=255)                                                                                                               aaTTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTTTTTTTTTTTATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCg                          >  2:755819/1‑141 (MQ=255)                                                                                                               aaTTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCg                          >  1:42916/1‑141 (MQ=255)                                                                                                               aaTTTAACTTGA‑AAGATTAAATAAATATTAACAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCg                          <  2:1028832/141‑1 (MQ=255)                                                                                                                 tttAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGt                        >  1:394659/1‑141 (MQ=255)                                                                                                                 tttAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGt                        <  2:508277/141‑1 (MQ=255)                                                                                                                   tAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCGCAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTa                      <  1:949748/141‑1 (MQ=255)                                                                                                                   tAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTa                      <  1:440035/141‑1 (MQ=255)                                                                                                                   tAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTa                      >  1:503709/1‑141 (MQ=255)                                                                                                                    aagttGA‑AAGCTTAAATAAATATTCTCAAGTTAATAAATAATTAACTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGAACAATTTGTATTTTACAAACATTAATTAAAAATAAAAGCAAGACATTCGTGCAATCGGTTAc                     <  2:970031/138‑1 (MQ=255)                                                                                                                     aCTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTAcc                    <  1:539444/141‑1 (MQ=255)                                                                                                                     aCTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTAcc                    >  1:295920/1‑141 (MQ=255)                                                                                                                     aCTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTAcc                    >  2:142095/1‑141 (MQ=255)                                                                                                                     aCTTAA‑AAGAATAAATAAATATAATCAAGTTAATAAACAATTAATTTTTAGATGGATTAAAC‑AAAAAACATAAAAAGCAAAATTTGTATTTTACAAAAAAAAAAAAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTAcc                    <  2:1037912/141‑1 (MQ=255)                                                                                                                      cTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCt                   <  1:346704/141‑1 (MQ=255)                                                                                                                      cTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCt                   <  1:501356/141‑1 (MQ=255)                                                                                                                             aGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAAtt             >  2:324652/1‑141 (MQ=255)                                                                                                                             aGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAAtt             >  1:581547/1‑141 (MQ=255)                                                                                                                             aGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAAACATTCGTGCGATCGGTTACCTTAAAtt             >  1:39608/1‑141 (MQ=255)                                                                                                                              gCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTg            >  1:28556/1‑141 (MQ=255)                                                                                                                                ttAAAAAAATATTAACAAGTTAATAAACAATTAATTTGTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGtt          <  2:719928/141‑1 (MQ=255)                                                                                                                                 taaataaaTATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACATTAAATTGttt         >  1:111930/1‑141 (MQ=255)                                                                                                                                   aataaataTTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTAc       <  2:424991/141‑1 (MQ=255)                                                                                                                                   aataaataTTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTAc       >  1:144186/1‑141 (MQ=255)                                                                                                                                    ataaataTTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTACa      >  2:1076269/1‑141 (MQ=255)                                                                                                                                      aaataTTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTACAAc    <  2:92041/141‑1 (MQ=255)                                                                                                                                        atatTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTAACCTTAAATTGTTTACAACtt  >  2:766559/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                         CCTTATAACATTAAATTATTTTATCGTACATTAAATTTAATAATAACAACTGATTTTTATAAGAATAAAGTATCGAACCATAGTAGATACACAAATAATACAAATGAAACAATTTAACTTGA‑AAGCTTAAATAAATATTATCAAGTTAATAAACAATTAATTTTTAGATGGATTCATC‑AAAAATCGTAAAAAGCACAATTTGTATTTTACAAACATTAATTAAAAAAGAAAGCAAGACATTCGTGCAATCGGTTACCTTAAATTGTTTACAACTG  >  CP000730/2543279‑2543553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.