New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 800928	63 (1.000)	4 (0.070)	4/244	NT	5.0%	intergenic (+62/‑289)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein
	?	CP000730	801948 =	94 (1.580)					intergenic (+189/+435)	USA300HOU_0748/dgkA1	hypothetical protein/possible diacylglycerol kinase

GTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAG  >  CP000730/800790‑801063                                                                                                                                           |                                                                                                                                        gtgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACt                                                                                                                                        <  1:587528/140‑1 (MQ=255)     tAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCa                                                                                                                                    >  1:388465/1‑140 (MQ=255)             cAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGt                                                                                                                            <  1:152253/140‑1 (MQ=255)             cAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGt                                                                                                                            <  1:624950/140‑1 (MQ=255)             cAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGt                                                                                                                            <  1:11215/140‑1 (MQ=255)             cAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGt                                                                                                                            <  1:690945/140‑1 (MQ=255)               aTTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAg                                                                                                                          <  1:81647/140‑1 (MQ=255)                ttGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGa                                                                                                                         >  1:382932/1‑140 (MQ=255)                ttGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTAGCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGa                                                                                                                         <  2:565617/140‑1 (MQ=255)                     tttAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTCAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTg                                                                                                                    >  1:642651/1‑140 (MQ=255)                      ttAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTgg                                                                                                                   <  2:557214/140‑1 (MQ=255)                      ttAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTgg                                                                                                                   <  2:164348/140‑1 (MQ=255)                         aaGAATAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTggatt                                                                                                                <  1:615849/140‑4 (MQ=255)                         aaGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTAGGaa                                                                                                                >  1:103781/1‑140 (MQ=255)                           gAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTCCGCAAAATTTATTTAGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATc                                                                                                              <  2:298400/140‑1 (MQ=255)                             aCAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGCATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCACAATTTATTTCGTCGTCACACCCCAACTTGAGGTATCTGTAGAAATTAGGAATcta                                                                                                            >  1:318114/1‑138 (MQ=25)                             aCAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTTAGTAGGGAGTGGAACAAAAATGATAATTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGATATCCa                                                                                                            >  1:318134/1‑140 (MQ=21)                                aaaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATATTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAAtt                                                                                                         >  1:140800/1‑140 (MQ=255)                                aaaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGCGAGTGGAACAGAAATGATACTTTCGCAAAATTTATTTCGTCATCCCACCCCAACATGCATTGTCTTTAGAAGTTGGGAAGTCAAtt                                                                                                         >  1:21394/1‑140 (MQ=25)                                 aaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAAttt                                                                                                        >  1:561993/1‑140 (MQ=255)                                        aaaTGTTAGAAGTTTTATACCACGCTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTttg                                                                                                 >  2:701091/1‑140 (MQ=18)                                          aTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTttgtt                                                                                               >  1:672367/1‑140 (MQ=255)                                           tGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACGATCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTttgttg                                                                                              <  1:529298/140‑1 (MQ=255)                                            gTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgg                                                                                             >  2:671815/1‑140 (MQ=255)                                              tAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatga                                                                                           >  1:541330‑M1/1‑94 (MQ=255)                                              tAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgggg                                                                                           <  1:93338/140‑1 (MQ=255)                                              tAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgggg                                                                                           <  1:493901/140‑1 (MQ=255)                                               aGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatgag                                                                                          >  2:430774‑M1/1‑93 (MQ=255)                                                gAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGcc                                                                                         >  1:263990/1‑140 (MQ=255)                                                        aTCAAACTTTAAATACGAATATGAAGTGGGGAGTGGGACAGAAATGCTACTTTCGCAAAATTCATTTCGTCGTCCCACCCCAACTTGCGTTGCCTGTAGAAATTTGGAATCCAATTTCTCTTTTTTGGGGCCCCGCCGGc                                                                                 <  2:70585/140‑1 (MQ=17)                                                        aTCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGc                                                                                 <  1:634956/140‑1 (MQ=255)                                                        aTCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGc                                                                                 <  1:669510/140‑1 (MQ=255)                                                           aaaCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATTATACTTTCGCAAAATTTATTTCGTCGTCCCCCCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAg                                                                              <  1:519402/140‑1 (MQ=255)                                                               tttAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTg                                                                          <  2:127685/140‑1 (MQ=255)                                                                  aaaTACGAATAGTAAGGGGGGAGTGGGACAGAAATGATACTTGCGCAAAATTTATTTCGTCGCCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACt                                                                       <  2:293986/140‑1 (MQ=255)                                                                    aTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTACGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCGTTGTTGGGGCCCCGCCGGCAAGGTTGACTAg                                                                     >  1:484772/1‑140 (MQ=255)                                                                     tACGAATAGTAAGTGGGGAGTGGGACAGAAAGGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGa                                                                    <  1:310316/140‑1 (MQ=255)                                                                       cGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAAt                                                                  <  1:701091/140‑1 (MQ=255)                                                                       cGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAAt                                                                  >  1:254319/1‑140 (MQ=255)                                                                            aggaaGTGGGTGGTGGGACAAAAATGATACTTTCGCAAAAATGATTGCGCTGTCCATCCCCAACTTGCAGTGTCGGTAGAAATTGGGAATCCAATTTCTCTTTATGGGGGCGCCGCCGGCAAGGTTGACTAGAATTGaaa                                                             <  2:263990/137‑1 (MQ=14)                                                                               aaGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGaaaaaa                                                          >  1:221580/1‑140 (MQ=255)                                                                                aGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCGTTGTTGGCACCCCGCCGGCAAGGTTGACTAGAATTGacaaagg                                                         >  1:385015/1‑138 (MQ=14)                                                                                 gTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCCAGAGTGACTAGAATTGAAAAAAGc                                                        >  2:23951/1‑140 (MQ=255)                                                                                 gTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGc                                                        >  2:517707/1‑140 (MQ=40)                                                                                      gAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGtt                                                   >  2:277082/1‑140 (MQ=40)                                                                                      gAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGtt                                                   >  2:418380/1‑140 (MQ=40)                                                                                         tGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGGTGACTAGAATTGAAAAAAGCTTGTTACa                                                >  2:458199/1‑140 (MQ=255)                                                                                          gggACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGACTTGAAAAAAGCTTGTTACaa                                               >  1:121231/1‑140 (MQ=255)                                                                                           ggACAGAAATGATACTCTCGCGAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATAGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGATGACTAGAATTGAAAAAAGCTTGTTACAAg                                              >  1:373111/1‑140 (MQ=255)                                                                                              cAGAAATTATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatgagtgtaactcatgcattcatatttttaagtacacattagctgtgactaa                                           <  2:342824‑M1/140‑95 (MQ=255)                                                                                              cAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGTGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTAAAAgcgc                                           >  1:711615/1‑140 (MQ=255)                                                                                              cAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCACTGTCTGTAGAAATTGAGAATCCAATTTCTCTTTATTAGGGCCCCGCCGGCCAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcgc                                           >  1:58481/1‑140 (MQ=14)                                                                                               aGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCAGCCCAACTTGCATTGTCTGTAGAAATTGGGAATCAAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGCTTGACTAGAATTGAAATATGCTTGTTACAAGCGCa                                          >  1:329904/1‑140 (MQ=14)                                                                                                gAAATGATACTTTCGCAACATTCCTTCCTTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAt                                         >  1:173346/1‑140 (MQ=14)                                                                                                gAAATGATACTTTAGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGTAATTGCGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGCCAAAACGTAAAAAAAGCTTGTTACAAGCGCAt                                         <  2:700269/140‑1 (MQ=14)                                                                                                     gATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGACCCGCCGGCAAGGATGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCg                                    >  2:473460/1‑140 (MQ=255)                                                                                                          tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAg                               <  1:671815/140‑1 (MQ=37)                                                                                                           ttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGt                              <  1:591288/140‑1 (MQ=37)                                                                                                             cGCAAAATTTATTTCGTCTTCCCACCCCAACTTGCATTGTCTGTAGAAATTGTGAATCCAATTTCTCTTTGTTGGGGACCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCa                            <  1:329800/140‑1 (MQ=255)                                                                                                              gCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCATTTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTTTTACAAGCGCATTTTCGTTCAGTCaa                           >  1:251625/1‑140 (MQ=18)                                                                                                               taaaaTTTATTTCTTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                          <  1:118899/139‑1 (MQ=17)                                                                                                               cAAATTTTATTTCGTCCTCCCTCCTCAACTCCCATTGTCTCGAGAAATTGGGAATCCAATTTTTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                          <  2:567268/140‑1 (MQ=11)                                                                                                                aaaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact                         >  1:624381/1‑140 (MQ=33)                                                                                                                  aaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactac                       >  1:580937/1‑140 (MQ=33)                                                                                                                        tttagcttttccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                 <  2:147817/130‑1 (MQ=255)                                                                                                                        tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                 >  2:449576/1‑140 (MQ=33)                                                                                                                        tttCGTCGTCCCACCCCAACTTGCATGGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGCGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAGAGCTTGGTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                 >  2:332492/1‑140 (MQ=255)                                                                                                                               gtcCCACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatgagtgtaactcatgcattcatatttttaagtacacattagctgtgactaatgataaagaatcgctacataatcaatcattagt          <  2:92458‑M1/140‑128 (MQ=255)                                                                                                                                 gggtccccaacataaagaaatactttttctttagaaattagtatttcttatgcatgagtgtaactcatgcattcatatttttaagtacacattagctgtgactaatgataaagaatcgctacataatcaatcattagtcg        <  2:171737‑M1/136‑130 (MQ=255)                                                                                                                                   cACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatgagtgtaactcatgcattcatatttttaagtacacattagctgtgactaatgataaagaagcgctacataatcaaacattagtcgtt      >  1:255699‑M1/1‑9 (MQ=255)                                                                                                                                     ccccAACataaagaaatactttttctttagaaattagtatttcttatgcattagtgtaactcatgcattcatatttttaagtacacattagctgggactaatgataaagaatcgctacataatcaatcattagtcgttct    <  1:267216‑M1/140‑134 (MQ=255)                                                                                                                                     ccccAACTTGCATTGTCTGTAGAACTTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTag    <  2:672367/140‑1 (MQ=37)                                                                                                                                       ccAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag  <  2:88783/140‑1 (MQ=35)                                                                                                                                           |                                                                                                                                        GTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAG  >  CP000730/800790‑801063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.