BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 800928	63 (1.000)	4 (0.070)	4/244	NT	5.0%	intergenic (+62/‑289)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein
*	?	CP000730	801948 =	94 (1.580)	4 (0.070)	4/244	NT	5.0%	intergenic (+189/+435)	USA300HOU_0748/dgkA1	hypothetical protein/possible diacylglycerol kinase

Only 100 of 102 total aligned reads displayed.

AATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCT  >  CP000730/801814‑802080

aaTTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg                                                                                                                                 >  1:226993/1‑140 (MQ=255)

aaTTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAAAACAAACACCAATTACAACAGACAATGCAAGATAGGAAGGGCCCCAACATAAAg                                                                                                                                 >  1:376198/1‑140 (MQ=37)

  ttGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa                                                                                                                               >  1:696777/1‑140 (MQ=255)

  ttGTGACTGAGATGAACTGTTATTTCTTAGACACTACAATACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATCGAGAAATTGGAACGCCAATTGCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa                                                                                                                               <  2:218798/140‑1 (MQ=25)

   tgagACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAAGTCAAGTTGGGGTGGGCCCCAACATAAAGaca                                                                                                                              >  2:245593/4‑138 (MQ=255)

    gtgACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTTGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACACGGCAAGTTGGGGGGGGCCCCAAATGAAAGAAAt                                                                                                                             >  1:22944/1‑140 (MQ=37)

     tgACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTTCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACATACAATGCAAGTTGGGGTGGGCCGCAACATAATGAAATa                                                                                                                            >  2:408178/1‑140 (MQ=255)

     tgACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATa                                                                                                                            >  1:54042/1‑140 (MQ=255)

                aaattttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTa                                                                                                                 <  1:128253/137‑1 (MQ=255)

                aaCTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTa                                                                                                                 <  1:267957/140‑1 (MQ=255)

                  cTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGAGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTCGa                                                                                                               >  1:600571/1‑140 (MQ=255)

                  cTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGACAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGa                                                                                                               <  1:84785/140‑1 (MQ=255)

                     ttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTGTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                            >  1:375682/1‑140 (MQ=255)

                     ttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                            <  2:305199/140‑1 (MQ=255)

                      tATGTTTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt                                                                                                           <  2:346520/140‑1 (MQ=255)

                      tATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt                                                                                                           <  2:431631/140‑1 (MQ=255)

                           cTTAGACATTCCAATACTATATTTGCAGTTGTTGACTGCGCCGCCCCAACAGAGAGAAATTGGAACGCTAATTTCTACAGACAATGCAAGTTGGGCTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAt                                                                                                      <  2:140124/140‑1 (MQ=17)

                           cTTAGACACGATAACACTATATTGGCAGGAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGACAATTTGTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAt                                                                                                      <  2:301223/140‑1 (MQ=18)

                            ttAGACACTGCAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAGCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAACTTAGTAtt                                                                                                     >  2:467141/1‑140 (MQ=255)

                            ttAGACACTACAAAACTATATTGGCAGTAATTGAATGCGAAGCAACAACAGAGAGAAATTGGGCCCCCAATTTCTACAGACAATGCCAGTT‑GCATGGGCCACAACATAAAGAAATACTTCATCTTTAGAAATTAGTAttt                                                                                                    >  2:73073/1‑140 (MQ=12)

                             tAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAttt                                                                                                    <  1:257966/140‑1 (MQ=255)

                              aGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGAAAATATTAATTTAGTTGGGCCCCAACATAAAGAAATAATTTTTCTTTAGAAATTAGTATTTc                                                                                                   >  1:527476/1‑140 (MQ=21)

                                 cccTAAAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGACAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTa                                                                                                <  2:475087/138‑1 (MQ=255)

                                 cacTCCAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGCGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTa                                                                                                >  2:267216/1‑140 (MQ=255)

                                 cacTACAACACTAGTATGGCAGGAGTTGACTGCGGGGGCCCAACATAGGGAAATTGGAACGCCAATTTTTACAGACAATGCCAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTa                                                                                                <  2:70821/140‑1 (MQ=17)

                                  acTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                               >  2:388851/1‑140 (MQ=255)

                                  acTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                               >  2:30710/1‑140 (MQ=255)

                                  acTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                               >  2:593971/1‑140 (MQ=255)

                                      caacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCACTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCAt                                                                                           <  1:375491/140‑1 (MQ=255)

                                      caacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGTAt                                                                                           >  1:426255/1‑140 (MQ=255)

                                      caacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCAt                                                                                           >  1:258658/1‑140 (MQ=255)

                                        tagaagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa                                                                                         >  1:541330‑M2/95‑140 (MQ=255)

                                        acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa                                                                                         <  1:335511/140‑1 (MQ=255)

                                        acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa                                                                                         >  2:335511/1‑140 (MQ=255)

                                        acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGa                                                                                         >  2:678465/1‑140 (MQ=255)

                                        acacTATATTGGCAGTAGTTGACTGCGAGGCCCCAACATAGAGAAATTGGAACGCCAATGTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGGATTTCTTGTGCATGa                                                                                         >  2:236938/1‑140 (MQ=255)

                                         agaagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAg                                                                                        >  2:430774‑M2/94‑140 (MQ=255)

                                          acTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgt                                                                                       >  1:580865/1‑140 (MQ=255)

                                           atataTTGGCAGTAGTTGACTGCGGGGCCCAAAAATAGATAAATTGGAACGCCAATTTCTACAGACAAAGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtg                                                                                      <  1:344556/139‑1 (MQ=255)

                                            tataTTGTCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAAGTGGTACGCAAATTTCTACAGACAATGTAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtgt                                                                                     <  2:438154/140‑1 (MQ=18)

                                            tataTTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtta                                                                                     <  2:370818/140‑3 (MQ=255)

                                            tataTTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtta                                                                                     <  1:73781/140‑3 (MQ=255)

                                               atTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAAc                                                                                  >  1:651721/1‑140 (MQ=255)

                                                ttGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACt                                                                                 <  2:253797/140‑1 (MQ=255)

                                                ttGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACt                                                                                 <  1:427747/140‑1 (MQ=255)

                                                tgggCAGCAGTTGTCTGCGGGGCCCCAACATAGAGAAATTGGAACTCCAAGCTTTAAAGACAATGCAAAATGTGGCGGGCCGCAACATACAGAATTACGATGGCATTAATAAGGAGTATATCTTATGCATGAGTGTAACt                                                                                 <  2:187075/138‑1 (MQ=12)

                                                    cAGGAGTTGACTGCGGGGCCCCAACAGAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATg                                                                             <  2:488520/140‑1 (MQ=255)

                                                      gtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTATTATGCATGAGTGTAATTCATGCa                                                                           <  1:462061/140‑1 (MQ=255)

                                                       tagtTGACTGCGTGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGTATGAGTGTAACTCATGCAt                                                                          <  1:398288/140‑1 (MQ=255)

                                                       tagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAt                                                                          <  2:243911/140‑1 (MQ=255)

                                                         gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTc                                                                        >  1:371381/1‑140 (MQ=255)

                                                         gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTc                                                                        >  1:156865/1‑140 (MQ=255)

                                                         gtTGACTGCGGGGCCCCAACATAGAAAAATTGTAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGAATTc                                                                        >  2:302069/1‑140 (MQ=255)

                                                                   gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTaa                                                              >  1:706314/1‑140 (MQ=255)

                                                                    ggCCGCAACATAGAGAAATTGTAACGCCAATTTCTACTGAAAATTCATGTTGGGGTGTGCCCAAATATAAAGAAATACTTTTTTTTTAGAAATTTGTATTACTCATGCATGAGTGTAACTCATGCATTCATATTTTGAAg                                                             <  2:48691/140‑1 (MQ=255)

                                                                    ggCCGCAACATAGAAAAATTGGAACCCCAAGTGCTACAGTCACTGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAg                                                             <  2:48710/140‑1 (MQ=17)

                                                                       cccAAGAGAGAGAAATGGGAGCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTac                                                          <  2:260146/140‑1 (MQ=255)

                                                                        ccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTaca                                                         >  2:448502/1‑140 (MQ=255)

                                                                          aaCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTaggatcaca                                                       >  1:502126/1‑132 (MQ=255)

                                                                            cATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAtt                                                     <  1:593971/140‑1 (MQ=255)

                                                                            cATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACGCATGCATTCATATTTTTAAGTACACAtt                                                     <  1:30710/140‑1 (MQ=255)

                                                                               agagAAATTGGAACGTCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGc                                                  <  1:50214/140‑1 (MQ=255)

                                                                                gagaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCt                                                 <  2:527476/140‑1 (MQ=255)

                                                                                 agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtg                                                <  1:552393/140‑1 (MQ=255)

                                                                                        cagaaattatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTaa                                         <  2:342824‑M2/94‑1 (MQ=255)

                                                                                         gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTCCACTTTAGCTGTGACTAAt                                        <  2:187405/140‑1 (MQ=255)

                                                                                         gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAATAGTATTTCTTATGCATAAGTGTAACTCATCCATTCATATTTTTAAGTACACATTAGCTAAGACTAAt                                        >  1:482156/1‑140 (MQ=18)

                                                                                          aaCGCCAATTTCTACCGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAGGTACACATTAGCTGTGACTAATg                                       >  2:82348/1‑140 (MQ=255)

                                                                                          aaCGCCAATTTCTACAGACACGGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCGTTAGAAATTAGTATTTCTTATGCATGAGTGTAACCCATGCATTCATATTTTTAAGTACACATTAGCCGTGACTAATg                                       >  2:442889/1‑140 (MQ=18)

                                                                                          aaCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATg                                       >  1:689491/1‑140 (MQ=255)

                                                                                          aaCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATg                                       >  1:427454/1‑140 (MQ=255)

                                                                                            ttccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTTACTAATGAt                                     >  1:258389/3‑140 (MQ=255)

                                                                                            cGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACTCATTAGCTTTGACTAATGAt                                     >  1:160759/1‑140 (MQ=255)

                                                                                               cAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                                  <  2:631688/140‑1 (MQ=255)

                                                                                               cAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATCCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                                  <  2:277841/140‑1 (MQ=255)

                                                                                                aaTTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAg                                 <  1:593975/140‑1 (MQ=255)

                                                                                                   ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGGAACTCATGCATTCATATTTTTAATTACACATTAGATGTGACTAATGATAAAGAAt                              >  1:98473/1‑140 (MQ=255)

                                                                                                     cTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCg                            <  2:54042/140‑1 (MQ=255)

                                                                                                      tACAGACAATGCAAGTCGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGc                           >  1:361786/1‑140 (MQ=255)

                                                                                                                gCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatca                 <  2:226993/140‑1 (MQ=255)

                                                                                                                gCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTAAATaatca                 >  1:300734/1‑140 (MQ=255)

                                                                                                                 cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATTAGTGTAACTCATGCATTCATATTTTTAAGTAAACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatgaa                >  1:255304/1‑140 (MQ=255)

                                                                                                                 cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatcaa                >  2:292233/1‑140 (MQ=255)

                                                                                                                  aaGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTAAATacacaat               >  2:140036/1‑140 (MQ=255)

                                                                                                                  aaGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTAAATaatcaat               >  2:370355/1‑140 (MQ=255)

                                                                                                                   aGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatcactc              >  1:595853/1‑140 (MQ=255)

                                                                                                                   aGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatcaatc              >  2:677137/1‑140 (MQ=255)

                                                                                                                   aGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaataaatg              >  1:695325/1‑139 (MQ=255)

                                                                                                                       ggggTGGGCCCCAACATCAAGAAATACTTTTTCTTTAGACACTACTCATTAAAAGAAATATTTCGAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTa          <  2:696777/140‑1 (MQ=17)

                                                                                                                       ggggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATGTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTCACTAATCAATCATTa          >  2:133545/1‑140 (MQ=255)

                                                                                                                        gggtgggtCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAg         <  2:372138/140‑1 (MQ=255)

                                                                                                                        gggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAg         <  2:107800/140‑1 (MQ=255)

                                                                                                                        gggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAg         <  2:720503/140‑1 (MQ=255)

                                                                                                                         ggtggtCCCCAACATAAAGAGATCGATTTGCGTTAGAAATAAGTATTTCTTATGCATGAGTGTAACACATGCATTCATATTTTTGAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATAAATCATTAGt        >  1:535060/1‑140 (MQ=17)

                                                                                                                         ggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGt        <  1:448502/140‑1 (MQ=255)

                                                                                                                         ggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGt        >  2:354144/1‑140 (MQ=255)

                                                                                                                           gggtccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCg      <  2:171737‑M2/129‑1 (MQ=255)

                                                                                                                             ggCCCCAACATAAAGAAATTCTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGtt    <  1:320607/140‑1 (MQ=255)

                                                                                                                             caccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAAGCGCTACATAATCAAACATTAGTCGtt    >  1:255699‑M2/10‑140 (MQ=255)

                                                                                                                               ccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATTAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGGGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCt  <  1:267216‑M2/133‑1 (MQ=255)

AATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCT  >  CP000730/801814‑802080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.