| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP000730 | 1,747,382 | (TAC)3→2 | 96.3% | coding (2065‑2067/2280 nt) | secDF ← | RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1747377 = | 1 (0.020) | 25 (0.450) | 21/244 | NT | 96.3% | coding (2072/2280 nt) | secDF | RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter |
| ? | CP000730 | = 1747373 | 1 (0.020) | coding (2076/2280 nt) | secDF | RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter | |||||
TCAACTGACGTTTTTTCATTATTCCCCATAGCGGAACGGCAATGAAGATTGAAGAGAATACACCAGAAATCAATCCGATAAATAATGCTAAAGTAAAGTTGAATATCGTAGGAGCACCGAAGAATAGTATAGCAACTACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCACGTACACGGTCAAAC > CP000730/1747240‑1747514 | ttaaccgtcGTTTTTTCATTATTCCCCATAGCGGAACGGCAATGAAGATTGAATAGAATACACCAGAAATCAATCCGATAAATAATGCTAAAGTAAAGTTGAATATCGTAGGAGCACCGAAGAATAGTATAGCAactacta < 2:363825/133‑1 (MQ=255) tttcaactgacgttttttcattattccccatagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaactac < 1:446500‑M1/5‑1 (MQ=255) ttcaactgacgttttttcattattccccatagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaactact > 1:285524‑M1/136‑141 (MQ=255) aacttatcttttttcattattccccctagcggaccggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACa > 1:277501‑M1/133‑141 (MQ=255) tttatgtttttttattattccacatagcggaacggcaatgaagattgaagagaatacatcagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAAt > 1:201329‑M1/131‑141 (MQ=255) tttcatttttccccatagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTaa > 1:113176‑M1/122‑141 (MQ=255) tccccatagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTAtt < 2:172928‑M1/29‑1 (MQ=255) ctatgcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAAtt > 1:596813‑M1/109‑141 (MQ=255) atagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgcatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTg < 2:516587‑M1/34‑1 (MQ=255) tagcggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGa > 2:200453‑M1/107‑141 (MQ=255) gaggaacggaaatgaagattgaagagaatacaccagaaatcaatccgataaataatgacacagtaaagttgaatatcgtaggagcaccgaagaatcgtatagcaACTACTACAATAAACGTAGATACTGTTATAATtgacc < 2:182829‑M1/37‑3 (MQ=255) cggaacggcaatgaagattgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACg > 2:3912‑M1/104‑141 (MQ=255) aagattgaagagaatccaccagaactcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATtgtctgt > 1:279569‑M1/91‑141 (MQ=255) aagattgaagagaatacaccagaaatctatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATtgtctgt > 1:670412‑M1/91‑141 (MQ=255) attgaagagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTa < 1:111405‑M1/54‑1 (MQ=255) agagattacaccagacatctatccgataaatggtgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGa > 1:94517‑M1/83‑141 (MQ=255) gagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTATTTGAt < 2:334448‑M1/60‑1 (MQ=255) gagaatacaccagaaatcaatccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGAt > 2:551712‑M1/82‑141 (MQ=255) tatcaattcgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATatc > 1:148472‑M1/68‑141 (MQ=255) aacccgataaatgatgctaaggtaaagtggaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATAtcatca > 2:612823‑M1/64‑141 (MQ=255) ccgataaataatgctaaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAAtt < 2:205768‑M1/81‑1 (MQ=255) taaagtaaagttgaatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGt > 1:36264‑M1/47‑141 (MQ=255) caaagtaaagttgaatatagtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGt > 2:243787‑M1/47‑141 (MQ=255) ttaatattctagtggCACCGAAGAATAGTATAGCAACTACTACTACAATAACTGTTAATTCTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACtt < 1:99150/127‑1 (MQ=255) aatatcgtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAGTTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCACTTTGTTCTGTTGTCGTAATCACTTTAAcc < 2:74348‑M1/108‑1 (MQ=255) cgtaggagcaccgaacaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTg > 1:183161‑M1/29‑141 (MQ=255) gtaggagcaccgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGt > 2:81061‑M1/28‑141 (MQ=255) accgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTTGTAATCACTTTAAACTTTTGTTAGTTTTc < 2:279092‑M1/122‑1 (MQ=255) accgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTc < 2:690046‑M1/122‑1 (MQ=255) cgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCAc > 2:521739‑M1/18‑141 (MQ=255) cgaagaatagtatagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCAc < 1:485656‑M1/124‑1 (MQ=255) tagcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCACGTACACGGTCaa < 1:626020‑M1/136‑1 (MQ=255) gcaACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCACTTACACGGTCAAAc < 1:600114‑M1/138‑1 (MQ=255) | TCAACTGACGTTTTTTCATTATTCCCCATAGCGGAACGGCAATGAAGATTGAAGAGAATACACCAGAAATCAATCCGATAAATAATGCTAAAGTAAAGTTGAATATCGTAGGAGCACCGAAGAATAGTATAGCAACTACTACTACAATAACTGTTAATACTGTATTAATTGAACGTGTCATTGTCTGTCTAATTGATCTATTAACGATATCATCAATTTGTTCTGTTGTCGTAATCACTTTAACCTTTTGTAAGTTTTCACGTACACGGTCAAAC > CP000730/1747240‑1747514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |