New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 287057855 (0.930)4 (0.070) 4/248 NT 7.0% intergenic (‑46/+21) gidA/USA300HOU_2715 glucose inhibited division protein A/GTP‑binding protein
?CP000730 = 2870582 54 (0.960)intergenic (‑50/+17) gidA/USA300HOU_2715 glucose inhibited division protein A/GTP‑binding protein

ATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATCAATTTGTACCATATCCAT  >  CP000730/2870438‑2870718
                                                                                                                                            |                                                                                                                                            
aTTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACCCCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG                                                                                                                                              <  1:552411‑M1/141‑1 (MQ=255)
aTTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG                                                                                                                                              <  1:598862‑M1/141‑1 (MQ=255)
     tGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGaatac                                                                                                                                         <  2:608733‑M1/141‑6 (MQ=255)
        tttAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTccgt                                                                                                                                      <  1:10587‑M2/141‑5 (MQ=255)
        tttAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTccgg                                                                                                                                      <  1:390895‑M2/141‑5 (MQ=255)
           cgccccacGTCTTGCCGATGCTAAACCTGCTTCTACACCTGAATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTa                                                                                                                                   <  1:250364/137‑1 (MQ=255)
           aGCCCCACGTCTGGCAGATTCTAAACCTGCTTCTACACCTGCATGTCCCGTACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTa                                                                                                                                   <  2:455108/141‑1 (MQ=255)
              accacGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGTACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGCCTAttt                                                                                                                                >  2:322642/1‑141 (MQ=255)
               ccacGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAACCCTCCTTATTTGATATCTTACTAGCCTTCTTCAGACGGTATTccgtcatgttc                                                                                                                               <  1:266363‑M2/141‑12 (MQ=255)
                cacGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCa                                                                                                                              <  1:657208/141‑1 (MQ=255)
                  cGTCTTGCAGATGCTAAACCTGCTTCTACAACTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAAt                                                                                                                            <  1:534733/141‑1 (MQ=255)
                      ttGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACt                                                                                                                        >  1:252857/1‑141 (MQ=255)
                        gCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTCTAAAAATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTAt                                                                                                                      >  1:134167/1‑141 (MQ=255)
                        gCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTAt                                                                                                                      >  1:76798/1‑141 (MQ=255)
                        gCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTAATTTGATATCTTACTAGGCTTCTTTGCAGGATATTCCGTCTTTTTCAATTACTAt                                                                                                                      >  2:283121/1‑141 (MQ=255)
                              gCTAACCCTGCTTCTACCCCTTCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCt                                                                                                                <  1:317089/141‑1 (MQ=255)
                               cTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTa                                                                                                               <  2:469702/141‑1 (MQ=255)
                               cTAAACCTGCTGCTACACCTGCATGTCCCGCACCTATAACGATTACAGCATATTCTTGAAGCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCGATTTCAATTACTATTTACCTa                                                                                                               <  2:558450/141‑1 (MQ=255)
                                       gctgctACACCTGCGCGGCCGGCACCTGTAACGAGTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTACTTAGGCCGGCATGCGGTCGATTTCAATTACTATTTACCTAAGCAAAAt                                                                                                       >  2:144396/1‑141 (MQ=255)
                                       gCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCGTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAAt                                                                                                       >  2:542765/1‑141 (MQ=255)
                                          tctcacccTGCAGGTCCCGGACCTATAACGATTACATCATATTCTTGAACAACAATATAAACCTCCTTATTTGATATCCTACTAGCCTTCTTAAGACGGTATTCCGACTATTTCAATTACTATTTACCTAAGCATAATTGa                                                                                                    <  2:117976/135‑1 (MQ=255)
                                           cTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGAc                                                                                                   <  2:86312/141‑1 (MQ=255)
                                              cacCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACATCCTTATTTGTTATCTTACTAGCCTTCTTAAGACGGTATTCCGTCAATGCCAATTACTCTTTACCTAAGCAGAATTGACTGa                                                                                                >  2:209749/1‑141 (MQ=255)
                                              cacCAGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGa                                                                                                >  2:480573/1‑141 (MQ=255)
                                               cccagCATGTCCCGCACATATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCTTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGaa                                                                                               <  2:465147/137‑1 (MQ=255)
                                               cccTGCATGTCCCGGACCTATTACGATTACATCATATTCTTGAACCACAATATAACCCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGaa                                                                                               <  2:356175/140‑1 (MQ=255)
                                                   gCATGTCCCGCACCTATAACGATTACATCATAGTCTGGAACCACAATATAAACCTCCTTATTTGATATCTGACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATGACTATTTAACTAAGCGGAAGTAACTGAATAAc                                                                                           >  1:86974/1‑141 (MQ=255)
                                                    cATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCGCCTTAGTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACt                                                                                          >  2:490340/1‑141 (MQ=255)
                                                     aTGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGAATAccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtg                                                                                         <  2:613301‑M2/141‑50 (MQ=255)
                                                     aTGTCCCGCACCTATAACGATTACATCATATTCTCGAACCACAATATAAACCTCCTACTTTGATCTCTTACTATCCTTCTTAAGACGGaattccgtcttaagaaggctagtaggaaatcaaacaaagaggtttaaactgtg                                                                                         >  1:613301‑M1/1‑88 (MQ=255)
                                                      tGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTCCCTAAGCAGAATTGACTGAATAACTGa                                                                                        >  2:378091/1‑141 (MQ=255)
                                                      tGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCCGAGTTGACTGAATAACTGa                                                                                        >  1:49734/1‑141 (MQ=255)
                                                       gTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGAt                                                                                       >  1:693104/1‑141 (MQ=255)
                                                          ccGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTACAATTACTATTTACCTCAGCAGAATTGACTGAATAACTGCTCGa                                                                                    >  1:472525/1‑141 (MQ=255)
                                                          ccGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATCACGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGa                                                                                    <  1:540208/141‑1 (MQ=255)
                                                            gCACCTAGAACGATTAAATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATg                                                                                  <  1:37652/141‑1 (MQ=255)
                                                             cACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGACTTGACTGAATAACTGATCGATgg                                                                                 >  2:396111/1‑140 (MQ=255)
                                                              aCCTATAACGATTACATCATATTCTTGGACCCCAATATAAACCTCCTTATTTGATATCTTACTAGACTTCTTAATCCGGaataccgtcttaagaaggatagtaggttatcacataaggaggattataacgtggttcaacaa                                                                                >  2:216942‑M1/1‑79 (MQ=255)
                                                              aCCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGtattccgtcttaagaagtctagtaagatatcaaatacggaggtttagattatggttcaagaa                                                                                >  1:551414‑M1/1‑79 (MQ=255)
                                                              aCCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAg                                                                                <  2:62612/141‑1 (MQ=255)
                                                                cTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATGGATGAGtt                                                                              >  1:352944/1‑141 (MQ=255)
                                                                  ataACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTtca                                                                            <  1:288657/141‑1 (MQ=255)
                                                                          tACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAGCTGATCGATGAGTTCATCACTTGc                                                                    >  2:9944/1‑141 (MQ=255)
                                                                               catATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGtct                                                               >  1:485787/1‑141 (MQ=255)
                                                                                atatTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGtctc                                                              <  1:311854/141‑1 (MQ=255)
                                                                                   ttgttgAACCACGTTATAATCCTCCTTATGTGATAACCTACTATCCTTCTTAAGACGGTATTccggattaagaagtctagtaagatatcaaataaggaggtttatattggggtccaagaatatgatgtaatcgttataggt                                                           >  2:216942‑M2/1‑62 (MQ=255)
                                                                                   ttCTTGAACCATAATCTAAACCTCCGTATTTGATATCTTACTAGACTTCTTAAGACGGAATAccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtggttcaagaatatgatgtaatcgttataggt                                                           >  1:551414‑M2/1‑62 (MQ=255)
                                                                                    tCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGCGTTCATCACTTGCATTATCACCa                                                          >  1:184961/1‑141 (MQ=255)
                                                                                     cTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCaa                                                         <  1:566372/141‑1 (MQ=255)
                                                                                          aCCATAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAAtt                                                    <  2:614373/141‑1 (MQ=255)
                                                                                            cacaGTTTAAACCTCTTTGTTTGATTTCCTACTAGCCTTCTTAAGACGGAATTccgtcttaagaaggatagtaagagatcaaagtaggaggtttatattgtggttcgagaatatgatgtaatcgttataggtgcgggacat                                                  >  1:613301‑M2/1‑53 (MQ=255)
                                                                                            cacaATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGtattccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtggttcaagaatatgatgtaatcgttataggtgcgggacat                                                  <  2:613301‑M1/141‑93 (MQ=255)
                                                                                               aacttaAACCTTCGTATTTGATATCTTACTAGTGTTCTTAAGACGGTATTCCGTCTATTTCGATTACTATTTACCTAAGCAGAATTGACTGAATAACTTATCGAGGAGTTCATCACTTGCAGTCTCACCAATAATTTCTcc                                               <  2:89255/137‑1 (MQ=255)
                                                                                               aacataAACCCCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTcc                                               <  2:565353/138‑1 (MQ=255)
                                                                                               aaTATAAACCTCCGTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTcc                                               <  1:285228/141‑1 (MQ=255)
                                                                                                atatAAACCTCCTTATTTGATACCTGACTAGCCTTCTTAAGACGGTATTCCGTCTGTTTAAATTAGTATTTACCTAAGCAGAATTGACTGAATAACTGATCGCTAAGTTCGACACTTCCAGTCTCACCAATAAGTTATcca                                              >  2:201799/1‑140 (MQ=255)
                                                                                                       cctcctTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAGTTTCTCCTAATAttt                                       <  1:515536/141‑1 (MQ=255)
                                                                                                           ctTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCa                                   >  1:4897/1‑141 (MQ=255)
                                                                                                           ctTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCa                                   >  1:178487/1‑141 (MQ=255)
                                                                                                              aTTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGt                                >  1:343175/1‑141 (MQ=255)
                                                                                                              aTTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGt                                >  2:442242/1‑141 (MQ=255)
                                                                                                              aTTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGt                                <  1:42427/141‑1 (MQ=255)
                                                                                                                 tGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCt                             <  1:480573/141‑1 (MQ=255)
                                                                                                                    tatCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTAATTAAGTCGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGt                          <  1:160063/141‑1 (MQ=255)
                                                                                                                       cTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTaa                       >  1:629186/1‑141 (MQ=255)
                                                                                                                       cTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACATAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCACGTTCTAGTTaa                       >  1:232358/1‑141 (MQ=255)
                                                                                                                          aCTACCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATc                    <  2:428413/141‑1 (MQ=255)
                                                                                                                                  tcttAAGAAGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATAGACTGAATAACTGATCGATGAGTTCATCACTTGCATTCTCACCAATAATTTCTCCTAATATTTCCCAAGATCTAGTTAAATCACTTTGTa            >  2:511953/1‑141 (MQ=255)
                                                                                                                                  gaacatgacggaataccgtctgaagaaggctagtaagatatcaaataaggagggttatattgtggttcaagaatatgatgtaatcgttataggtgcgggacatgcaggtgtagaagcaggtttagcatctgcaagacgtgg            <  1:266363‑M1/135‑131 (MQ=255)
                                                                                                                                      aaGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATCAATTTGTACCat        <  2:605275/141‑1 (MQ=255)
                                                                                                                                         ccgGaataccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtggttcaagaatatgatgtaatcgttataggtgcgggacatgcaggtgtagaagcaggtttagcatctgcaagacgtggtgctaaa     <  1:390895‑M1/140‑138 (MQ=255)
                                                                                                                                         aCGGaataccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtggttcaagaatatgatgtaatcgttataggtgcgggacatgcaggtgtagaagcaggtttagcatctgcaagacgtggtgctaaa     <  1:10587‑M1/141‑138 (MQ=255)
                                                                                                                                         aCGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATCCATTTGTACGATATc     >  1:387519/1‑141 (MQ=255)
                                                                                                                                           ggTTTTTCGTCGATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATCAATTTGTACCATATCCa   <  1:124733/141‑1 (MQ=255)
                                                                                                                                            gTATTccgtcttaagaaggctagtaagatatcaaataaggaggtttatattgtggttcaagaatatgatgtaatcgttataggtgcgggacatgcaggtgtagaagcaggtttagcatctgcaagacgtggtgctaaaaca  <  2:608733‑M2/141‑137 (MQ=255)
                                                                                                                                            |                                                                                                                                            
ATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTATTTCAATTACTATTTACCTAAGCAGAATTGACTGAATAACTGATCGATGAGTTCATCACTTGCAGTCTCACCAATAATTTCTCCTAATATTTCCCAAGTTCTAGTTAAATCAATTTGTACCATATCCAT  >  CP000730/2870438‑2870718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.