| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1744053 | 92 (0.890) | 3 (0.030) | 3/246 | NT | 3.6% | intergenic (‑307/+100) | relA2/apt | GTP pyrophosphokinase/adenine phosphoribosyltransferase |
| ? | CP000730 | = 1744121 | 75 (0.770) | intergenic (‑375/+32) | relA2/apt | GTP pyrophosphokinase/adenine phosphoribosyltransferase | |||||
AAAACTTTTACAAAAATTCGACCTAAATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1743909‑1744053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatcctTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCAT < CP000730/1744121‑1743982 AAAACTTTTACAAAAATTCGACCTAAATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAA < 1:452519/141‑1 AAACTTTTACAAAAATTCCACCTATATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTTAGTAAATAAAAAAT < 2:494358/141‑1 accTTTACTAAAATTCGACCTAAATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCC < 1:138310/138‑1 ACTTTTACAAAAATTCGACCTAAATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCC > 1:896549/1‑141 ACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTT > 2:397258/1‑141 tTTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAA < 1:1079730/140‑1 AAATAAAAAATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGT < 1:397258/141‑1 AATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTAT < 2:923340/141‑1 ATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAGCATCGTTTATTTAgt > 2:230541/1‑139 ATCCTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATT > 1:708928/1‑141 CTTCATCAAATGTATGAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGGGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCA < 2:380879/141‑1 CTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCA < 2:1086393/141‑1 CTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCA > 2:277357/1‑141 CTTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAAAATCGTTTATTTATTTCt > 2:1038626/1‑140 CTTCATCAAATGTATAAGAACCAAAAACAAAAATAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCA < 2:1108760/141‑1 TTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCAT < 2:1194816/141‑1 TTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCAT < 1:861682/141‑1 AAAACTTTTACAAAAATTCGACCTAAATCTACTGTTTCATTTTTTAAATATTAGTTCTATGATACTACAATTTATGAAATAAATAAACGATGTTATTAAGGTATAATGCTCAATCATCTAACATTTTCAGTAAATAAAAAATCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1743909‑1744053‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatcctTCATCAAATGTATAAGAACCAATGACTTAATTAAAAAAGTTGTTTAAGTTTTCTTAACATGAGATGTTAGGATTTTTTATTTACTGAAAATGTTAGATGATTGAGCATTATACCTTAATAACATCGTTTATTTATTTCAT < CP000730/1744121‑1743982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |