Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC CP000730 1,747,382 (TAC)3→2 100% coding (2065‑2067/2280 nt) secDF ← RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP000730 1747374 1747376 3 37 [0] [1] 38 secDF RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1747377 =0 (0.000)37 (0.860) 30/242 NT 100% coding (2072/2280 nt) secDF RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter
?CP000730 = 1747373 0 (0.000)coding (2076/2280 nt) secDF RND superfamily resistance‑nodulation‑cell division protein:proton (H+) antiporter

AATCGTAACGTTTGACCGTGTACGTGAAAACTTACAAAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1747523‑1747377
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtagtagtTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATGAAAAAAC  <  CP000730/1747373‑1747249
                                                                                                                                                                                                                                                                                
AATCGTAACGTTTGACCCTGTACGTGAAAACTTACAAAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTG                                                                                                                                      <  2:518330/140‑1
 ATCGTACCGTATGGCAGTGGACGTGAAAACTTACAAAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGT                                                                                                                                     <  1:258697/140‑1
 ATCGTAACGTTTGACCGTGTACGTGAAAACTTACAAAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAAACAATGACACGTTCAATTAATACAGAATTAAAAATTATTGT                                                                                                                                     >  1:195761/1‑140
                                    AAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGCTATGGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATCCTATTCTTCGGTGCACCTACGA                                                                                                  >  2:2742/1‑140
                                     AAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGAT                                                                                                 >  2:293677/1‑140
                                     AAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGAT                                                                                                 >  2:536129/1‑140
                                        ggTAAGGTGATTACAATAACAAGCCAATGTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATT                                                                                              <  1:99146/138‑1
                                             AGTGATTACGCCCACACAACAAATTGATGATAGCGGTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAAat                                                                                         >  2:335108/1‑138
                                             AGTGATTACGACAACAGAACAAATTGATGATATAGTTAATAGATCAATTAGACAGACAATGACACATTCAATTAATACAGTATTAACAGATATTGTAGTAGTTGCCATAACATACATAGGTTCACCTTCGATATTCAAat                                                                                         >  2:131880/1‑138
                                              GTGATTACGACAACAGAACAAATTGATTATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTT                                                                                        <  2:530633/140‑1
                                              GTGATTACGACAACAGAACAAATTGATGATATCGTTAATCGATCAATTGTACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTT                                                                                        >  2:2773/1‑140
                                              GTGATTACGAAAACAGAACAAAGTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTT                                                                                        <  2:205024/140‑1
                                                  TTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTCCT                                                                                    >  1:374786/1‑140
                                                       ACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGC                                                                               >  2:236198/1‑140
                                                        CAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCA                                                                              <  1:431287/140‑1
                                                                     TGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAATGTTAACAGGTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTTTTTATCGGAT                                                                 >  2:153214/1‑140
                                                                           ttacgcTAATATTTCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCCGTGCCCCTACGATATTCCACTTTACTTTAGCATTATTTATCGGATTGATTT                                                           <  2:179080/134‑1
                                                                                 TAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTG                                                     <  1:171456/140‑1
                                                                                  AATAGATCAATTATACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGT                                                    <  2:343074/140‑1
                                                                                  AATAGATCAAGTATACAGCCCATTACACCTTTAATTAATACAGTATTAACAGTTATTGGAGTAGTTGCTATACTATTCTGCGGTGCTCCTACGAGATTCGACTTTACTTTAGCATTATTTATCGGATTGATTTCTtttgt                                                    <  2:509504/140‑6
                                                                                   ATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTTTACTTTATTTTAGCATTATTTATCTGATTGATTTCTGGTGTA                                                   >  1:101276/1‑140
                                                                                         CAATTTGACAGACAATGAAACGTTCAATTAATACAGTATTAATAGTTATTGTAGTAGTTTCTATACTATTCTTTGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTACCGGATTGATTTCTGGTGTATTCTCT                                             <  1:421792/140‑1
                                                                                                       ATGACCCGTTCAATTACTACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGC                               <  2:295007/140‑1
                                                                                                        TGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCC                              >  2:455652/1‑140
                                                                                                        TGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTAGTTTATTCTCTTAAATCTTCATTGCa                              >  1:324794/1‑139
                                                                                                             CGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTTTGGAGCAGTCATTGCAATCTTCATTGCCGTTCC                         <  1:404809/140‑1
                                                                                                             CGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCC                         <  1:518785/140‑1
                                                                                                                 CAATTAATACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATCTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTA                     >  2:280459/1‑140
                                                                                                                        TACAGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAA              >  2:158501/1‑140
                                                                                                                           AGTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAA           <  1:236198/140‑1
                                                                                                                            GTATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTTCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTAAATCTTCATTGCCGTTCAGCTCTGGGGAAGAAT          >  2:446656/1‑140
                                                                                                                             TATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATG         <  2:157407/140‑1
                                                                                                                              ATTGACAGTTATTGTAGTAGTTGCTTTACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGCATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATGA        <  2:294701/140‑1
                                                                                                                              ATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATaa        >  2:296075/1‑138
                                                                                                                              ATTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAAGGA        >  2:458067/1‑140
                                                                                                                               TTAACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTTATTTCTTGTGTAATATATTCAATCTTCATTGTCGTTCAACTAAGGGGAAAAATGAA       >  1:56190/1‑140
                                                                                                                                 AACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAAAAATGAAAA     >  2:439595/1‑140
                                                                                                                                  ACAGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGATCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATGAAAAA    >  2:94164/1‑140
                                                                                                                                   CAGTTATGGTAGTAGGTGCTATACTATTCTTCGAGGCTCCTACGATATTCAACTTTACTTTAGCAGTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGAAAATAATAAAAAAA   <  2:190232/140‑1
                                                                                                                                    AGTTATTGTAGTAGTTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATGAAAAAAC  <  1:531710/140‑1
                                                                                                                                                                                                                                                                                
AATCGTAACGTTTGACCGTGTACGTGAAAACTTACAAAAGGTTAAAGTGATTACGACAACAGAACAAATTGATGATATCGTTAATAGATCAATTAGACAGACAATGACACGTTCAATTAATACAGTATTAACAGTTATTGTAGTAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1747523‑1747377
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtagtagtTGCTATACTATTCTTCGGTGCTCCTACGATATTCAACTTTACTTTAGCATTATTTATCGGATTGATTTCTGGTGTATTCTCTTCAATCTTCATTGCCGTTCCGCTATGGGGAATAATGAAAAAAC  <  CP000730/1747373‑1747249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.