New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	514600 =	NA (NA)	3 (0.050)	3/246	NT	NA	intergenic (+268/‑106)	rrs1/rrl1	16S ribosomal RNA/23S ribosomal RNA
	?	CP000730	514618 =	NA (NA)					intergenic (+286/‑88)	rrs1/rrl1	16S ribosomal RNA/23S ribosomal RNA

CTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACACTCACAAGATTAATAACGCGTTTAAATCTTTTTATAAAAGAACGTAACTTCATGTTAACGTTTGACTTATAAAAATGGTGGAAACATAGATTAAGTTATTAAGGGCGCACGGTGGATG  >  CP000730/514479‑514733                                                                                                                                            |                                                                                                                    ctggACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACACTca                                                                                                                    <  1:538386/138‑1 (MQ=1)    gaatAAAAAAAACTTGTACATTGAAAACTAGATAAGTCAGTAAAAGATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACACTCACaa                                                                                                                 <  2:411088/138‑1 (MQ=1)             gagaTTGTACATTGAAAACTAGATAAGTAAGTAAGATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCGTACGCACAAAAGGTTAGTGTTCGAAAGAACACTCACAACATtaataa                                                                                                        >  2:567798/4‑141 (MQ=1)                                                                                                                   aagcGCTAGTGTTCGTAAGAACGCTCACAAGATTAATAACGCGTTTAAATCTTTTTATAAAAGAACGTAACTTCATTTTAACGTTTTACTTATAAAAATGGTGGAAACATAGATTAAGTTATTAAGGGCGCACGGTGGATg  <  2:422930/138‑1 (MQ=1)                                                                                                                   aagcGCTAGGGTTCGAAAGGACACTCACAAGATTAATAACGCGTTTAAATCTTTTTATAAAAGAACGTAACTTCATGTTAACGTTTGACTTATAAAAATGGTGGAAACATAGATTAAGTTATTAAGGGCGCACGGTGGATg  <  2:650976/138‑1 (MQ=0)                                                                                                                                            |                                                                                                                    CTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACACTCACAAGATTAATAACGCGTTTAAATCTTTTTATAAAAGAACGTAACTTCATGTTAACGTTTGACTTATAAAAATGGTGGAAACATAGATTAAGTTATTAAGGGCGCACGGTGGATG  >  CP000730/514479‑514733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.