| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 800928 | 82 (1.100) | 3 (0.040) | 3/246 | NT | 4.1% | intergenic (+62/‑289) | hisC1/USA300HOU_0748 | histidinol‑phosphate transaminase/hypothetical protein |
| ? | CP000730 | 801948 = | 62 (0.880) | intergenic (+189/+435) | USA300HOU_0748/dgkA1 | hypothetical protein/possible diacylglycerol kinase | |||||
TGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTG > CP000730/800788‑801068 | tGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAC < 2:452573‑M1/141‑1 (MQ=255)tGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAC < 2:586782‑M1/141‑1 (MQ=255)gggtGTTAGAATTACAATTGCTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAAC < 1:177986‑M1/140‑1 (MQ=255) ggTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACt < 1:819090/141‑1 (MQ=255) ggTGTTAGAATTACAATTGGTTGTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGTCAGAAATGATACTTTCACAAAATTTATTTCGTCGTCCCACCCCAACt < 2:555381/141‑1 (MQ=255) gtgtTGAAATTACAATTGGTGTTAAATAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTGTAAATACGAATACTAAGTGGGGAGTGGGACAGAAATGATCCTTGCGCAAAATTTATTTCGTCGTCCCACCCCAACgt < 2:453866‑M1/141‑3 (MQ=255) gtgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGCAATGAGAATTTCGCCAAATATATGTCGTCGTCCCACCCCAACta > 1:369817/1‑140 (MQ=255) gtgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGGTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACtt < 2:54468/141‑1 (MQ=255) tgtTAGAATTACAATTGGTTTTAAAGATCAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTg < 1:616867/141‑1 (MQ=255) tgtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTg < 1:257340/141‑1 (MQ=255) tgtTAACATTACAAATGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTg < 2:261859/141‑1 (MQ=255) ggtTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTg < 2:84436/140‑1 (MQ=255) aaTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGt < 2:281826/141‑1 (MQ=255) aTTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGACACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTc < 2:552221/141‑1 (MQ=255) ttACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCACCTTGCATTGTCt > 1:45036/1‑141 (MQ=255) ttACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCt > 1:786101/1‑141 (MQ=255) aCAATTGGTTTTAAAGAACAAAGTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGt < 1:600225/141‑1 (MQ=255) aCAAGTGGTTTAAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATCGTAAGTGGGGAGTGGCACAGAACCGATACCTTAGCACAATTTATTTCGTCCTCCCCCCCCGACTTGCATTGTCTGt < 2:859207/141‑1 (MQ=255) aaaTTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAAGGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTa < 1:821219/140‑1 (MQ=255) ttGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGaa < 1:834930/141‑1 (MQ=255) ggTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAAt > 1:530637/1‑141 (MQ=255) ttttAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGCAATGATACTTTCGCAAAATTTATTTCGTCGTCCAACCCAGGCTTGCATTGTCTGtctaagttg > 1:252259/1‑133 (MQ=37) ttttAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTg < 1:76693/141‑1 (MQ=255) ttttAAAGAAAAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTg < 2:150213/141‑1 (MQ=255) aaaGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCTCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTggatt < 1:576372/141‑4 (MQ=255) aaGAACAAAATGATAAAATGTGAGACGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAAt < 2:214244/141‑1 (MQ=255) cAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactttttctttagaaattagt < 1:220703‑M1/141‑32 (MQ=255) cAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGGAATTGGGAATC‑CAAt > 1:203958/1‑141 (MQ=255) aaaaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAAtt > 1:563727/1‑141 (MQ=255) aaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑tc > 1:140099/1‑141 (MQ=255) aaTGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑tc > 2:28270/1‑141 (MQ=255) aTGATAAAATGTTAGAAGTGTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAACTTGGGAATC‑CAAtc‑tcc > 2:236343/1‑140 (MQ=255) tGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑tctc < 1:324195/141‑1 (MQ=255) aaaaTGTTAGAAGTTATATCAAACTTTAAGTACGAATAGTAAGTGGGGAAGGGGGCAGAAATGATACTTTCGCAAAATTTATTTCGTCGTACCACCCCAACTTGCATTGTCTGTAGCAATTGGGAATCTCAATTCTCTCtt > 2:376068/1‑141 (MQ=18) aaaTGTTAGAAGTTTTATCAACCTTTCCAATCGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTttgt > 1:636943/1‑141 (MQ=17) aaaTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTttgt > 1:620149/1‑141 (MQ=255) aaaTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTttgt > 1:159957/1‑141 (MQ=255) aTGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTttgttg > 1:467351/1‑141 (MQ=255) gTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTAGTCGTAGGTCTCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTggg > 1:409018/1‑141 (MQ=21) ttAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCACACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTgggg > 1:68873/1‑141 (MQ=255) aaGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactctttctttagaaagtagtatttcttatgcatgagtga > 1:478123‑M1/1‑91 (MQ=255) ggTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCccg < 2:334310/140‑1 (MQ=255) aGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCccg < 1:192610/141‑1 (MQ=255) tATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGc < 1:59145/141‑1 (MQ=255) tATCAAACTTTAAATACGAATAGTAAGGGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGc < 1:100620/141‑1 (MQ=255) taaaaCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTATAGAAAAATTTCTTTCGCCGTCCCACCACAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGcga > 2:368965/3‑139 (MQ=17) tCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCaa < 2:43736/141‑1 (MQ=255) aaaCTTTAAATACGAATAGGAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAgg < 2:612098/141‑1 (MQ=255) aaCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGt < 1:244898/141‑1 (MQ=255) aaCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGt > 2:465276/1‑141 (MQ=255) aaCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGGCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGTGCCCCGCCGGCACggg > 2:301108/1‑140 (MQ=255) aCTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGtt > 1:78822/1‑141 (MQ=255) cTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTg < 2:83873/141‑1 (MQ=255) cTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTg < 2:53298/141‑1 (MQ=255) tttAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGa < 1:543307/141‑1 (MQ=255) ttAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCCAGGGTGag > 1:14083/1‑140 (MQ=255) ttAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGAc > 1:571954/1‑141 (MQ=255) aaaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTa > 2:380821/1‑141 (MQ=255) aaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAg > 1:738514/1‑141 (MQ=255) aaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAg > 1:399530/1‑141 (MQ=255) aTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGa > 2:188088/1‑141 (MQ=255) aTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGa > 1:263576/1‑141 (MQ=255) tACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTATGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGaa < 1:844184/141‑1 (MQ=255) aGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTGCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGaaaa > 2:76998/1‑141 (MQ=255) aGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGaaaa > 1:148355/1‑141 (MQ=255) aaGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAg > 1:702579/1‑141 (MQ=255) aGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTATGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGc > 2:298822/1‑141 (MQ=255) gTGGGGAGTGGGACAGAAATGATACTTTCGCACAATTTATTTCGGCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCt < 1:371001/141‑1 (MQ=255) gTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGAAAAGAATTGAAAAAAGCt < 2:463986/141‑1 (MQ=255) gggggAGTGGGAGAGAAGTGATACCTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCtt < 2:516720/140‑1 (MQ=255) gggAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGt > 1:192134/1‑141 (MQ=39) gggACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑AAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAACCTTGTTACAAg > 1:826566/1‑141 (MQ=255) ggACAGAAATGATACTTTCGCAAAATTTATTTCGGCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgc > 2:808487/1‑141 (MQ=38) cAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCACCCCCAACTGGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCa > 1:817498/1‑141 (MQ=255) tGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTGGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCACTTTCg > 2:721219/1‑141 (MQ=255) gATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGt > 1:116115/1‑141 (MQ=255) aCTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCa < 1:615161/141‑1 (MQ=39) tttCGCAAAATTTATTTCGTCGTCCCACCCCAACataaagaaatactttttctttagaaattagtatttcttatgcatgagtgtaactcatgcattcatatttttaagtacacattagctgtgactaatgataaagaatcg < 2:366990‑M1/141‑108 (MQ=255) tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CACTT‑TCTCTTTGTTAAGCCAACAATGGTTAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAga > 1:198350/1‑140 (MQ=11) tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAACGCTTGTTACAGGCGCATATTCGTTCAgg > 2:116111/1‑140 (MQ=255) tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGt > 1:505207/1‑141 (MQ=37) tggCAAATTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCa < 2:66237/139‑1 (MQ=21) cAAAATTTATTTCGTCGTCCCACCCCAAATTGCATTGTCAGCAGAAATTGTGAATC‑CAATT‑TCTCTTTGTTGGGGCCTCGCCGGCAAGGTTGAAAAAAAAAAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact < 2:800527/141‑1 (MQ=11) cAAAATTTATTCCGTGCCCCCACCCCAACTTGCATTGTCTGTAGCAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact < 2:759507/141‑1 (MQ=11) atttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGCATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg < 2:555130/141‑1 (MQ=17) atttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg < 1:207968/141‑1 (MQ=32) atttCGTCGTCCCACCCCAACTTGCAGTGTCTGTAGAAATTGGGAATC‑CAATT‑TCCCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCCTTTTCGTTCCGTCAACTACTGCCaa > 1:452832/1‑141 (MQ=255) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactaaaaacaat < 2:530637/141‑9 (MQ=12) gtcgtcCCACCCAAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGATTGTTACAAGCGCATTTTCGTTCAGTCAACTAGTGCAAATATaa > 1:354737/1‑141 (MQ=255) tcgtcCCAGCCCAACTGGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCGCTTTGTTGGGGCCCCGCCGGCAAGGTTGAAAAAAAAAAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc < 2:767404/141‑1 (MQ=11) cgtcCCACCCCAACTTGCAGTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt > 1:458492/1‑141 (MQ=21) cccACCCCAGCTTGCATTGGCTGTGGAAGTTGGGAATG‑CAATT‑GCGCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTg > 2:859476/1‑141 (MQ=11) cccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACGTTg > 2:227810/1‑141 (MQ=25) ccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGATCAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTCCCAATATAACTTTGt > 1:197905/1‑141 (MQ=255) cccAACTTGCATTGTCTGTGGTCGCGTTGAAGC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag < 2:826566/141‑1 (MQ=11) cccAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag > 1:53916/1‑141 (MQ=35) cccAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag > 2:689716/1‑141 (MQ=35) cTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTg < 1:596768/141‑1 (MQ=38) | TGGTGTTAGAATTACAATTGGTTTTAAAGAACAAAATGATAAAATGTTAGAAGTTTTATCAAACTTTAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATC‑CAATT‑TCTCTTTGTTGGGGCCCCGCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTG > CP000730/800788‑801068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |