New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 800928	82 (1.100)	3 (0.040)	3/246	NT	4.1%	intergenic (+62/‑289)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein
	?	CP000730	801948 =	62 (0.880)					intergenic (+189/+435)	USA300HOU_0748/dgkA1	hypothetical protein/possible diacylglycerol kinase

TAAAGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTC  >  CP000730/801808‑802079                                                                                                                                             |                                                                                                                                    aaaaTTAATTGTGACTGTGAGGAACTTTTATGTCTTAGACACTACACCACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACACTGCAAGTTGGGGTGGGCCCCAACa                                                                                                                                     <  1:831558/140‑1 (MQ=37)   aaGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAAAATCGCAAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATa                                                                                                                                   >  1:850585/1‑141 (MQ=255)        aTTGTGACTGAGATGCACTTTTATGTCTTAGACACTACAATACTATATCGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACTGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa                                                                                                                              <  2:863497/141‑1 (MQ=255)        aTTGTGACTGAGATGAACTTTTATCTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACCAAGGAAGCGGGGGTGGGCCCCAACATAAAGaa                                                                                                                              <  1:859218/141‑1 (MQ=37)         ttGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaaa                                                                                                                             <  1:573196/141‑1 (MQ=255)           gtgACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGACAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGCAAtc                                                                                                                           >  2:590581/1‑140 (MQ=255)              aCTGGGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtt                                                                                                                        <  2:69570/141‑1 (MQ=255)                  agaTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTc                                                                                                                    <  2:386466/141‑1 (MQ=255)                  agaTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTc                                                                                                                    <  1:592938/141‑1 (MQ=255)                    aTGCACTTTTATGTACTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt                                                                                                                  <  2:7666/141‑1 (MQ=255)                    aTGAACTTTTATGTCTTAGACACTACCACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGTGCCCCAACATAAAGAAATACTTTTTCtt                                                                                                                  <  2:7546/141‑1 (MQ=255)                    aTGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt                                                                                                                  >  2:815197/1‑141 (MQ=255)                              aTGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGCCCATGCACGTTAGGGTGGACCCCAACATACAGAAATACTTTTTCGTTAGAAGTTAg                                                                                                        >  2:817252/1‑141 (MQ=21)                              aTGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAg                                                                                                        >  1:395627/1‑141 (MQ=255)                               tGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt                                                                                                       <  1:824501/141‑1 (MQ=255)                               ggTCTTAGACAGTACAACACTATATTGGCAGTAGTTGACGGCGGGGCCCCAACATAGAGAAATTGGCACGTCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt                                                                                                       <  2:360084/140‑1 (MQ=255)                               caaaatgataaaatgttagaagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGt                                                                                                       <  1:220703‑M2/31‑1 (MQ=255)                                gTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTa                                                                                                      <  1:262169/141‑1 (MQ=255)                                        cacTACAACTCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGAAGTAGCCCAACAGAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                              >  1:280678/1‑141 (MQ=18)                                        cacTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                              >  1:562219/1‑141 (MQ=255)                                            acaacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCAt                                                                                          <  2:115302/141‑1 (MQ=255)                                                cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgt                                                                                      <  1:697699/141‑1 (MQ=255)                                                 acTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtg                                                                                     <  1:765620/141‑1 (MQ=255)                                                  ctttatTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtgt                                                                                    <  1:224271/138‑1 (MQ=255)                                                  cTATAATGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtgt                                                                                    <  2:48777/141‑1 (MQ=255)                                                  aagttttatcaaactttaaatacgaatagtaagtggggagtgggacagaaatgatactttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTCTTTCTTTAGAAAGTAGTATTTCTTATGCATGagtga                                                                                    >  1:478123‑M2/92‑140 (MQ=255)                                                     tatTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAAc                                                                                 >  1:183620/1‑141 (MQ=255)                                                     tatTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAAc                                                                                 <  2:398645/141‑1 (MQ=255)                                                        tGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCa                                                                              <  1:535057/141‑1 (MQ=255)                                                               agtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTc                                                                       <  2:667830/141‑1 (MQ=255)                                                                gtTGGCGGCGGGGCACCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTGTTTCTTTAGAAATTAGTTTCTGTTATGCAAGAGTGTGACTCATGCATTCa                                                                      <  2:146132/141‑1 (MQ=17)                                                                 ttGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCat                                                                     <  2:632383/141‑1 (MQ=255)                                                                     cTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttt                                                                 >  1:329538/1‑141 (MQ=255)                                                                            gCCCCAACAAAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTa                                                          <  2:158304/141‑1 (MQ=255)                                                                             ccccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTac                                                         >  1:201185/1‑141 (MQ=255)                                                                             ccccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATCCATGAGTGTAACTCATGCAGTCATATTTTTAAGTac                                                         >  1:318715/1‑141 (MQ=255)                                                                                cAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTCAGTAcaca                                                      >  2:727807/1‑141 (MQ=255)                                                                                 aaCATAGAGAAATTGGAACGCCAATTTCTCAAGAAAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAt                                                     <  1:370279/141‑1 (MQ=255)                                                                                  aCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGTAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAtt                                                    <  1:521219/141‑1 (MQ=255)                                                                                  aCATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACAtt                                                    <  1:244345/141‑1 (MQ=255)                                                                                        agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCGCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAATTCTTATGCATAAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCagt                                              >  2:560472/1‑141 (MQ=255)                                                                                        agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt                                              <  1:686195/141‑1 (MQ=255)                                                                                        agaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt                                              >  1:638964/1‑141 (MQ=255)                                                                                        agaAAGTCGACCGCCCATTTCTACAGACAATGCAAGTTGGGGTCGACCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgt                                              <  1:55883/141‑1 (MQ=18)                                                                                         gaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtgtg                                             >  1:838855/1‑141 (MQ=255)                                                                                            attggcgttccAATTTCTACAGACAATGAAAGTTGGGGTGGGCTCCAACCTACAGAAATACTATTTCTTTAGAGATTCGTATTTCTAATTCATGAAGCTAACTCATGCAGAGACAAATTTAAGTACACATTAACTCTGACt                                          >  2:75076/10‑141 (MQ=9)                                                                                              tGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTaa                                        <  2:515026/141‑1 (MQ=255)                                                                                                  aCGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGAt                                    >  2:706567/1‑141 (MQ=255)                                                                                                    cccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaa                                  <  2:550531/140‑1 (MQ=255)                                                                                                     ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                                 <  2:806348/141‑1 (MQ=255)                                                                                                     ccAATTTCTACAGACAACGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                                 <  1:438810/141‑1 (MQ=255)                                                                                                     ccAATTACAACAGACTATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGCACACATTAGCCGTGACTAATGATaaa                                 <  2:809574/141‑1 (MQ=18)                                                                                                         tttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAGTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAAt                             >  1:288207/1‑141 (MQ=255)                                                                                                         tttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTCTTCCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAAt                             >  1:288291/1‑141 (MQ=255)                                                                                                          ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAATTACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATTCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATc                            <  1:74291/141‑1 (MQ=255)                                                                                                          ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATCTTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATc                            <  2:562482/141‑1 (MQ=255)                                                                                                          ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATc                            <  1:688161/141‑1 (MQ=255)                                                                                                          ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATc                            <  1:102197/141‑1 (MQ=255)                                                                                                           tttcgcaaaatttatttcgtcgtcccaccccaacATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCg                           <  2:366990‑M2/107‑1 (MQ=255)                                                                                                               cAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTTTTTTGTTTTTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACCCATTTTCTGTGTCTAATTATAAAGAATCGCTaa                       >  2:362479/1‑140 (MQ=18)                                                                                                               cAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTAc                       <  1:815197/141‑1 (MQ=255)                                                                                                                 gACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATGGCAACAt                     >  1:563719/1‑141 (MQ=255)                                                                                                                    aaTGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaat                  <  1:731816/141‑1 (MQ=255)                                                                                                                        cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTACATCATGCATTCATATTTTTAAGTACACATTAGCTGTGCCTAATGATAAAGAATCGCTCCATattcaat              >  1:129121/1‑141 (MQ=18)                                                                                                                           gTTGGGGTGGGCCCCAACATAAAGAAATCCTTTTTCTTTAGAAGTTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATAAGCTGTGACTAATGATAAAGAATCGCTACATAATCcatcat           >  2:351729/1‑141 (MQ=255)                                                                                                                              ggggTGGGCCCCAACATAAAGAAATACTTTTTCTTTATTAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAg        >  2:802133/1‑141 (MQ=255)                                                                                                                               gggTGGGCCCCAACATAAATAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGt       <  2:369969/141‑1 (MQ=255)                                                                                                                                  tGGGCCACAACATAAAGAGATGCTGTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTACTGCATTCATATTTTTAAGTACACATTGACTGTGACTAATGATAAAGAATCGCTACCTAATCAATCATTagtagt    >  2:223108/1‑141 (MQ=17)                                                                                                                                    ggCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTAGTTc  >  2:854740/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                    TAAAGTAATTGTGACTGAGATGAACTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTC  >  CP000730/801808‑802079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.