| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 82407 | 61 (1.540) | 3 (0.080) | 3/250 | NT | 4.6% | coding (512/957 nt) | USA300HOU_0079 | nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein |
| ? | CP000730 | = 82418 | 65 (1.710) | coding (523/957 nt) | USA300HOU_0079 | nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein | |||||
TCCGCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/82264‑82407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaGCACAAAGTGTTGCCATGAATCACTACCTACAAATGGTAACAATTGCCAACGTACGCCTAAATAATAAATGAATAAAATAGCTAACCAGTATTCTGGCATTGAGGTCATCACTTGGGCGAATCCACGAATTCCATTAGC < CP000730/82418‑82280 TCCGCATACACTCTACGCTAATGGACTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTTGGTAGTGATTCATG < 1:90811/141‑1 GCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCA > 1:366961/1‑141 CGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCAACTTGATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAGCACAAA < 2:395799/141‑1 CATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCATGAATCACTACCTACAAATGGTAACAATTGCCAACGTACGCCTAAATAATAAATGAATAAAATAGCTAACCAGTATTCTGGCATT < 1:260433/126‑1 CATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCATGAATCACTACCTACAAATGGTAACAATTGCCAACGTACGCCTAAATAATAAATGAATAAAATAGCTAACCAGTATTCTGGCATT > 2:260433/1‑126 CAGCACAAAGTGTTGCCATGAATCACTACCTACAAATGGTAACAATTGCCAACGTACGAATGGTTTATTAATGAATAAAATAGCTAACCAGTATTCTGGCATTGAGGTCATCACTTGGGCGAATCCACGAATTCCATTAGC < 1:336285/141‑1 TCCGCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/82264‑82407‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcaGCACAAAGTGTTGCCATGAATCACTACCTACAAATGGTAACAATTGCCAACGTACGCCTAAATAATAAATGAATAAAATAGCTAACCAGTATTCTGGCATTGAGGTCATCACTTGGGCGAATCCACGAATTCCATTAGC < CP000730/82418‑82280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |