New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 82407	61 (1.540)	3 (0.080)	3/250	NT	4.6%	coding (512/957 nt)	USA300HOU_0079	nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein
	?	CP000730	= 82418	65 (1.710)					coding (523/957 nt)	USA300HOU_0079	nickel (Ni2+)/peptide ABC superfamily ATP binding cassette transporter, membrane protein

GCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCG  >  CP000730/82267‑82546                                                                                                                                             |                                                                                                                                            gCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCA                                                                                                                                             >  1:366961‑M1/1‑141 (MQ=255)        cggtaccgtAAGGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCGATTTTATTCATTTATTCTTTAGGCGTACGTTGGCTATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACttt                                                                                                                                      <  2:261274/133‑1 (MQ=255)        cGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCAACTTGATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAgcacaaa                                                                                                                                      <  2:395799‑M1/141‑8 (MQ=255)              gCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTAATAAACCATTCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCtg                                                                                                                                <  1:336285‑M2/141‑3 (MQ=255)                    tgaacgcttGGACTCGTCCTAGTTATGACCCCAACGCCAGAATACTGGTTAGCTATTTTATTCATTTCTTATTTAGGCGCAAGTTGGCAATCGTTACCTTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCTAATc                                                                                                                          <  2:209911/133‑1 (MQ=255)                    ggtagtCGTGGATTTGCCCAAGTTATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATc                                                                                                                          <  2:153481/136‑1 (MQ=255)                       aTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAGTCTTc                                                                                                                       >  1:267774/1‑141 (MQ=255)                       aTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                       >  1:39921/1‑141 (MQ=255)                          cggggATTCGCCCAAGTGATGACCGCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTCGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTcaca                                                                                                                    <  2:137929/138‑1 (MQ=255)                           gTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCCCaa                                                                                                                   >  2:28749/1‑141 (MQ=255)                             ggATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAtt                                                                                                                 >  1:155871/1‑141 (MQ=255)                                 tCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAttgttg                                                                                                             <  2:264309/141‑1 (MQ=255)                                  cGCCCAAGTGATGAACTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgttgt                                                                                                            >  1:253569/1‑141 (MQ=255)                                    cccAAGTGATGACCTCCATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTgttgttt                                                                                                          >  1:275005/1‑140 (MQ=255)                                    cccAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgtggtga                                                                                                          >  1:245238/1‑139 (MQ=255)                                       aaGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTGGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAATGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAg                                                                                                       >  2:314981/1‑141 (MQ=255)                                       aaGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAg                                                                                                       <  1:383165/141‑1 (MQ=255)                                        aGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCTTTCCATTTCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATTTTCACAATTGTTGTTATAGa                                                                                                      <  1:218874/141‑1 (MQ=255)                                            atgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                       <  2:369989/120‑1 (MQ=255)                                            atgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTc                                                                                                                       >  1:369989/1‑120 (MQ=255)                                                 cTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCa                                                                                             <  1:357726/141‑1 (MQ=255)                                                   taaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCata                                                                                           <  1:14846/140‑1 (MQ=255)                                                    aaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAGCACAAAGTGTtgccatgaatcactacctacaaatg                                                                                                         <  1:260433‑M2/126‑26 (MQ=255)                                                    aaTGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAGCACAAAGTGTtgccatgaatcactacctacaaatg                                                                                                         >  2:260433‑M2/1‑101 (MQ=255)                                                         caaaaTACTGGTTATCTATTTTATTCCTTTATTCTTTAGGCGTACGGTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                     <  1:61333/138‑1 (MQ=255)                                                         cAGAATACTGGTTCGCTATTTTCTTCATTTATTATTTCGGCGTACGTTGGCAATTCTTACCGTTTGTAATTAGTTATTCATGGCAACACTTTGTGCTTCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                     <  2:267774/141‑1 (MQ=255)                                                         cAGAATACTGGTTAGCTATTTTATTAATTTATTATTTAGGTGTACGTTTGCAATTTTGACCATTTGTATCTAATTATGCATGGCAACACTTTTTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                     <  2:39921/141‑1 (MQ=255)                                                         cAGAATACGGGTTAGCTATTTTATTCATTGATTATTGAGGCGTATGTTGGCAACTGTTACCATTTGTAGGTAGTGATTCATGGCAATACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTAt                                                                                     <  1:61372/141‑1 (MQ=255)                                                           gAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATtg                                                                                   <  2:147481/141‑1 (MQ=255)                                                                  gggtAGCTATTTTATCCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAg                                                                            <  1:30056/138‑1 (MQ=255)                                                                    ttAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGca                                                                          >  1:404061/1‑141 (MQ=255)                                                                    ttAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGca                                                                          >  1:309118/1‑141 (MQ=255)                                                                     tatcTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAATGATTCATGGCAACACTTTGTGTTGCCAATCTTCACAATTTTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGcac                                                                         <  2:18649/138‑1 (MQ=255)                                                                     tAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGcac                                                                         >  1:277637/1‑141 (MQ=255)                                                                            tttATTTTTTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                  <  2:191560/141‑1 (MQ=255)                                                                            tttATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                  >  1:275599/1‑141 (MQ=255)                                                                            tttATTCATTTATTATTTAGGCGCACGTTTGCAATTGTTACCCTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACTATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGAt                                                                  <  2:340733/141‑1 (MQ=255)                                                                               tttCTTTTTTTATTTTGGGTTACGTTGGTAATTGTTACCATTTGTAGGTAGTGATTCATGGAAACACTTTGTGCTGACAAGCTTCAAAATTTTTGTTATAGAAGGGTGTCATATCTTATTGATTACAGCACATCGGATTac                                                               <  2:189462/140‑1 (MQ=255)                                                                               aTTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACGCTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac                                                               >  2:187910/1‑141 (MQ=255)                                                                               aTTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAAGCGTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac                                                               >  1:107252/1‑141 (MQ=255)                                                                                ttCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTTATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTaca                                                              <  2:347871/141‑1 (MQ=255)                                                                                    tttATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGGGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACaaa                                                          >  1:360251/1‑141 (MQ=255)                                                                                       attattTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGt                                                       <  1:161480/141‑1 (MQ=255)                                                                                            ttAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGTCACACTTTGTGCTGTCAATCTTCACAATGGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt                                                  <  2:277969/141‑1 (MQ=255)                                                                                            ttAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt                                                  >  2:141574/1‑141 (MQ=255)                                                                                              aGGCGTTCGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCa                                                <  1:215561/141‑1 (MQ=255)                                                                                              aGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCa                                                >  2:35483/1‑141 (MQ=255)                                                                                               ggCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCCCATCTGATTACACAAACGTTAGATCaa                                               >  2:355678/1‑141 (MQ=255)                                                                                               ggCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACCAACGTTAGATCaa                                               >  1:76667/1‑141 (MQ=255)                                                                                                      gTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGt                                        >  2:346440/1‑141 (MQ=255)                                                                                                         ggCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAGGATGCGTATc                                     >  2:288579/1‑141 (MQ=255)                                                                                                          gCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGCTCAAGATGCGTATCa                                    >  2:145650/1‑141 (MQ=255)                                                                                                          gCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAGCAAGATGCGTATCa                                    >  2:38868/1‑141 (MQ=255)                                                                                                            aaTTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAAc                                  <  2:366961/141‑1 (MQ=255)                                                                                                             aTTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACt                                 <  2:336285/141‑1 (MQ=255)                                                                                                               tGTTCCCATTTGGAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGTACATCTGATTAAACTCATCTTAGATCAAGATGCGTATCAACTgg                               <  1:110171/141‑1 (MQ=255)                                                                                                               tGTTACCCTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTgg                               <  2:72070/141‑1 (MQ=255)                                                                                                                  tACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATCGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACTTCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGgcgc                            <  2:253569/141‑1 (MQ=255)                                                                                                                     cATTTGTAGGTAGTGATTCATGGCAacactttgtgctgccatgaatcactacctacaaatggtaacaattgccaacgtacgcctaaataataaatgaataaaatagctaaccagtattctggcatt                                        <  1:260433‑M1/126‑102 (MQ=255)                                                                                                                     cATTTGTAGGTAGTGATTCATGGCAacactttgtgctgccatgaatcactacctacaaatggtaacaattgccaacgtacgcctaaataataaatgaataaaatagctaaccagtattctggcatt                                        >  2:260433‑M1/1‑25 (MQ=255)                                                                                                                     cATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGt                         >  1:371721/1‑141 (MQ=255)                                                                                                                      aTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGtt                        <  2:437243/141‑1 (MQ=255)                                                                                                                      aTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGtt                        >  1:346808/1‑141 (MQ=255)                                                                                                                             ggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATACGTATCAACTGGCGCAGTTAAGACAt                 >  2:80739/1‑141 (MQ=255)                                                                                                                             ggtagTGATTCATGACAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGAGGCATAACTTATTGATTACATCAAATCTGATTACACAAACGTTAGTACAAAATGCGAATCAAATGGAGAAGGTAAGActt                 >  2:418948/1‑139 (MQ=255)                                                                                                                                      tCATGGCAAGCAGTTGTGCTGCCAATCTGGACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTa        <  2:57169/141‑1 (MQ=255)                                                                                                                                       cATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaa       >  1:404345/1‑141 (MQ=255)                                                                                                                                        aTGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTATCGTTaaa      >  2:408317/1‑141 (MQ=255)                                                                                                                                         tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACGTTTTTCGTTaaaa     >  2:188596/1‑141 (MQ=255)                                                                                                                                         tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaaa     >  2:363053/1‑141 (MQ=255)                                                                                                                                           gCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACAtttttttttttaatt   >  2:237084/1‑131 (MQ=255)                                                                                                                                           gCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc   >  2:237026/1‑141 (MQ=255)                                                                                                                                           gCAACACTTTGTGCTGCCAATCTTAACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc   >  1:337342/1‑141 (MQ=255)                                                                                                                                            cagcacaaagtgttgccatgaatcactacctacaaatggtaacaattgccaacgtacgaatggtttattaatgaataaaatagctaaccagtattctggcattgaggtcatcacttgggcgaatccacgaattccattagc  <  1:336285‑M1/141‑140 (MQ=255)                                                                                                                                             |                                                                                                                                            GCATACACGTTACGCTAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCG  >  CP000730/82267‑82546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.