New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 512620 =63 (1.140)48 (1.260)
+TTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAA
30/178 NT 52.6% intergenic (+688/‑173) recR/rrs1 recombination protein RecR/16S ribosomal RNA
?CP000730 1998278 = NA (NA)intergenic (‑6/+5) USA300HOU_t0050/rrf4 tRNA‑Val/5S ribosomal RNA

CTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATTAACATTTAAGTCAATAACTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/512756‑512620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATT  >  CP000730/1998278‑1998413
                                                                                                                                         ||||||||||||||||||||||||||||||||||||||||                                                                                                                                        
CTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTA                                                                                                                                                                               >  1:192283/1‑140
        TGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTTCCGTCATGTATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCC                                                                                                                                                                       <  1:206370/140‑1
          TTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTTTCCAT                                                                                                                                                                     >  1:143649/1‑140
           TTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTTTCCATT                                                                                                                                                                    >  2:579506/1‑140
             GTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATAATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTT                                                                                                                                                                  >  1:105427/1‑140
               AACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTAT                                                                                                                                                                >  1:367429/1‑140
                ACTTATAGTTACGTTTTTTTGTATTAACATTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTACTTATACATTTTATCAACATTTAAGTAAATAACTTTTTTTTTCTTGTCCATTTTATT                                                                                                                                                               >  2:239330/1‑140
                ACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATT                                                                                                                                                               >  1:548103/1‑140
                 CTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTT                                                                                                                                                              >  2:518096/1‑140
                   TATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTT                                                                                                                                                            >  1:111889/1‑140
                     TAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTA                                                                                                                                                          >  1:202741/1‑140
                        TTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACC                                                                                                                                                       <  1:235922/140‑1
                          ACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAA                                                                                                                                                     <  2:397095/140‑1
                            GTTTTTTGGAATTAACTTTGACATATTGTCATGCAGGTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCGTGTCCATTTTATTTTTTAACCAAAA                                                                                                                                                   <  2:482529/140‑1
                              TTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAGTTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATT                                                                                                                                                 <  2:495307/140‑1
                                TTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTG                                                                                                                                               >  1:187110/1‑140
                                   GGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTCCATTTCACTGACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCCAAATTTGATT                                                                                                                                            >  1:626778/1‑140
                                      ATTAACGTTGACATATTGTGGTTTAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTTTCTTTTTCATTTTATTTTTTAACCTAAATTTGttgtat                                                                                                                                         >  2:642614/1‑134
                                      ATTAACGTTGACATATTGTCATTCCGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGCTTAtc                                                                                                                                         >  1:478403/1‑138
                                      ATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACTTTTTATCATCATTTAATTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAA                                                                                                                                         <  1:56808/140‑1
                                      ATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAA                                                                                                                                         <  1:250283/140‑1
                                      ATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAA                                                                                                                                         >  1:479143/1‑140
                                      ATTAACGTTGACATATTGTCATTCAGTTTGCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTAAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAA                                                                                                                                         >  1:159140/1‑140
                                        TAACGTTGACATATTGTCATTAAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTACATTTTATTTTTTAAGCACAATTTGATTAATAA                                                                                                                                       >  2:447740/1‑140
                                           CGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGACAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAAGTTGATTAAAAAAat                                                                                                                                    >  1:545607/1‑138
                                            GTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCTAAGTTTGATTAAAAAACTG                                                                                                                                   <  2:307179/140‑1
                                              TGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAATATTTAAGTTAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCC                                                                                                                                 <  1:502348/140‑1
                                               GACATATTGTCATTTAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCT                                                                                                                                <  2:343882/140‑1
                                               GACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCT                                                                                                                                <  2:93738/140‑1
                                                ACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTG                                                                                                                               <  2:602350/140‑1
                                                  ATATTGTCATTCAGTTTTTAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGC                                                                                                                             <  2:131503/140‑1
                                                  ATATTGTCATTCAGTTTTCGATGTTCATTTTTTTTACCGACAAGAATTAATTATTCATTTTATCAACATTTAAGTCAATATCTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGC                                                                                                                             <  2:185704/140‑1
                                                  ATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTCTACATTTTATCAACATTTAAGTCCATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGC                                                                                                                             <  2:66254/140‑1
                                                  ATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAATCAAAATTTGATTAAAAAACTGCCTGGC                                                                                                                             >  2:438754/1‑140
                                                  ATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGC                                                                                                                             <  1:632628/140‑1
                                                    ATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATAAAACTTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTACCTAGCAA                                                                                                                           >  2:220478/1‑140
                                                     TTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAAC                                                                                                                          <  1:615338/140‑1
                                                             CAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACT                                                                                                                  <  2:204596/140‑1
                                                                TTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTA                                                                                                               >  1:470853/1‑140
                                                                    CAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGG                                                                                                           >  1:11575/1‑140
                                                                    CAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAATCAATAACTTTTTTTATCTTGTACATTTTATTTTTTAACCAAAATTTGATTACAAAACTGCCTGGCAACGTTCTCCTCTAGAGG                                                                                                           >  1:16678/1‑140
                                                                      ATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCCGGCAACGTTCTACTCTAGCGGAA                                                                                                         >  2:535453/1‑140
                                                                       TGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAAC                                                                                                        <  1:556153/140‑1
                                                                        GTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATCTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACG                                                                                                       <  2:449896/140‑1
                                                                         TTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTCCTCTAGCGGAACGT                                                                                                      >  1:565712/1‑140
                                                                                 TCTTACCGACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGA                                                                                              >  1:459225/1‑140
                                                                                     ACCTACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTAC                                                                                          <  1:158517/140‑1
                                                                                     ACCGACAAGAATTAATTATACATTTTATCATCATTTATTTCAAGAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTAC                                                                                          <  1:450810/140‑1
                                                                                     ACCGACAAGAATTAATTATACATTTTATCAACATTTAGGTCAATTACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGATCGTAAGTTCGACTAC                                                                                          <  1:493585/140‑1
                                                                                         ACAAGAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTGATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATC                                                                                      <  2:481927/140‑1
                                                                                            AGAATTAATTATACATTTTATCAACATTTAAGTTAATAACTTTTTTGATCTTGTCCATTTTTTTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGAC                                                                                   <  1:123347/140‑1
                                                                                             GAATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACG                                                                                  <  1:271463/140‑1
                                                                                              AATTAATTATACATTTTTTCATCATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGC                                                                                 <  2:159140/140‑1
                                                                                              AATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGC                                                                                 <  2:479143/140‑1
                                                                                               ATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTTATTAAAAAATTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCT                                                                                <  1:195366/140‑1
                                                                                               ATTAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCT                                                                                <  2:548103/140‑1
                                                                                                 TAATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAA                                                                              <  2:628904/140‑1
                                                                                                  AATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTTTTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAG                                                                             <  1:291663/140‑1
                                                                                                  AATTATACATTTTATCAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAG                                                                             >  1:640451/1‑140
                                                                                                               atcAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACTAAAATTTGATTAAAAAACTGCCTGGCAACGTCCTACTCTAGCGGAACGTAAGTTCGACTACCATCGCAGCTAGGGCGCTTAtatttt                                                                >  2:133882/4‑134
                                                                                                                tcAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTTACCTTATTTTGATTAAAAAACTGCCTGGCAACGTTTTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTG                                                               >  2:661150/3‑140
                                                                                                                tcAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTG                                                               >  1:15446/3‑140
                                                                                                                 cAACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAATGAGCTTTACGTCTGT                                                              >  2:507731/2‑140
                                                                                                                 aaaaATTTAAATCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGTCAACGTTCTACTCTAGCGGAACGTAAGTTCCACTACCATCGACGCTAAGGATCTTACCTCCTGT                                                              >  2:408557/5‑140
                                                                                                                   ACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAACTTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACTATAGACGCTAAGGAGGTTAACTTCTGTGT                                                            >  2:277776/1‑140
                                                                                                                   ACATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGT                                                            >  1:172774/1‑140
                                                                                                                    CATTTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTT                                                           >  1:642795/1‑140
                                                                                                                    CATTTAAGTCAATAACTTTATTTATATTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTT                                                           >  1:364725/1‑140
                                                                                                                       TTAAGTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGG                                                        <  1:518096/140‑1
                                                                                                                           GTCAATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTGGCGGAACGTAAGTTCGACTACCATCGCCGCTAAGGCGCTTAACTTCCGTGCTCGGCATG                                                    >  2:477837/1‑140
                                                                                                                             cagTAACTTTTTTTATCTTGGCCATTTTATTTTTTACCCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGG                                                  <  2:495133/137‑1
                                                                                                                               ATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCCAAATTTGATTAAAAAACTGCCTGGCATCGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTCACTTCTGTGTTCTGCCTGGGAA                                                >  2:25465/1‑140
                                                                                                                               ATAACTTTTTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAA                                                >  1:27320/1‑140
                                                                                                                                       TTTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTG                                        >  1:630620/1‑140
                                                                                                                                        TTTATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGA                                       <  2:364963/140‑1
                                                                                                                                         TTATCTTGTCCAGTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGTCGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGAC                                      <  1:74602/140‑1
                                                                                                                                           ATCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCT                                    >  1:14058/1‑140
                                                                                                                                            TCTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTC                                   >  2:42003/1‑140
                                                                                                                                             CTTGTCCATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACTTTCTACTCTAGCGGAACGTAAGTTCAACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCC                                  >  1:157491/1‑140
                                                                                                                                                    ATTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTTAGTTCGACTACCATCGGCGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTAT                           <  1:438754/140‑1
                                                                                                                                                     TTTTATTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGAAACGATCTACTATAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATA                          >  1:351569/1‑140
                                                                                                                                                          TTTTTTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCAC                     >  1:220071/1‑140
                                                                                                                                                             TTTAACCAAAATTTGATTAAAAAACTGCCTGGAAACGTTCTCCCCTAGCGTAACGTAAGTTCGACTCCAATCGACGCTAAGCAACTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAG                  <  2:106488/140‑1
                                                                                                                                                              TTAACCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAAAGAAAATACGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCGATAGTCACCAGA                 >  1:206506/1‑140
                                                                                                                                                              TTAACAAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTTCTCTAGCGGAACGTAAGTTCGACTACCATCGCCGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTAAGTCGTCCTTGCTATAGTCACCAGA                 <  2:143649/140‑1
                                                                                                                                                                  CCAAAATTTGATTAAAAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATA             <  2:552202/140‑1
                                                                                                                                                                   CAAAATTTGATTAAAAAACTTCCTTGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATAT            <  1:62751/140‑1
                                                                                                                                                                   CAAAATTTAGTTAAAAACCTGCCTGGCAACGTTCTACTCTAGCTGAACGGAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATAT            <  2:428566/140‑1
                                                                                                                                                                             TTAAAAAACTGCTAGGCAACGTCCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGACATGGGAACAAGTGTCACATACCTGCCATAGTCAACAGACATATGAAGGTAATT  <  1:133882/140‑1
                                                                                                                                         ||||||||||||||||||||||||||||||||||||||||                                                                                                                                        
CTAAATAATGTTTGTAACTTATAGTTACGTTTTTTGGAATTAACGTTGACATATTGTCATTCAGTTTTCAATGTTCATTTTTCTTACCGACAAGAATTAATTATACATTTTATTAACATTTAAGTCAATAACTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/512756‑512620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAACTGCCTGGCAACGTTCTACTCTAGCGGAACGTAAGTTCGACTACCATCGACGCTAAGGAGCTTAACTTCTGTGTTCGGCATGGGAACAGGTGTGACCTCCTTGCTATAGTCACCAGACATATGAATGTAATT  >  CP000730/1998278‑1998413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.