New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 49971359 (1.060)5 (0.090) 3/248 NT 8.0% coding (2417/4500 nt) gltB1 glutamate synthase (NADPH), large subunit
?CP000730 = 499723 58 (1.090)coding (2427/4500 nt) gltB1 glutamate synthase (NADPH), large subunit

ATAAAGCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATAC  >  CP000730/499575‑499851
                                                                                                                                          |                                                                                                                                           
ataacgccactCAACAAAGTGATAAAAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATgcg                                                                                                                                            <  2:497767/130‑1 (MQ=255)
aTAAAGCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATgcg                                                                                                                                            >  2:589470/1‑140 (MQ=255)
   aaGCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATTATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCaa                                                                                                                                        <  1:39147/140‑1 (MQ=255)
   aaGCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCaa                                                                                                                                        >  1:212649/1‑140 (MQ=255)
     gCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAAtt                                                                                                                                      >  2:513826/1‑140 (MQ=255)
      cACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATACGGAATCTATTTTCTTATTGCAACACGCATATAAAGAAAATAATTATGCGCAAttt                                                                                                                                     >  2:268069/1‑140 (MQ=255)
          tCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAg                                                                                                                                 <  2:213976‑M2/140‑2 (MQ=255)
           caacaaAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAAGAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATAACTATGCGCAATTTAAAgc                                                                                                                                <  1:445077‑M2/140‑3 (MQ=255)
              caaAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGACAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGGACCACCCATGTAAAGAAACTGTCTATACGCCATTTAAAgcata                                                                                                                             <  2:340449‑M2/140‑6 (MQ=255)
                 aGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATActc                                                                                                                          <  2:464884/140‑1 (MQ=255)
                  gTGATGATAAGTATCTTGCATCAGGTAGTAAATTCCGATGGAGATAACGAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGTAAGTGACTATGCGCACGTTACAGCATActct                                                                                                                         <  2:441172/140‑1 (MQ=255)
                    gatgatAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCtttaaattgcgcatagtcatt                                                                                                                        >  1:612410‑M1/1‑119 (MQ=255)
                    gatgatAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCtttaaattgcgcatagtcatt                                                                                                                        >  1:278596‑M1/1‑119 (MQ=255)
                     atgatAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGaa                                                                                                                      >  2:560157/1‑140 (MQ=255)
                         caaTTATCCTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTATTTTATACTCTGAAGCgg                                                                                                                  <  1:460821/139‑1 (MQ=255)
                            ttATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTTTTATTGCAGTACGCATGTAAAGAAAATGACTATGCGCAATGTAAAGCATACTCTGAAGCGGTGa                                                                                                               <  1:174811/140‑1 (MQ=255)
                               tCTTGCATCAGGTAGTACATTCCAATGGTGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACa                                                                                                            <  2:315098/140‑1 (MQ=255)
                               tCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACa                                                                                                            >  2:599221/1‑140 (MQ=255)
                                 ttGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACaaa                                                                                                          >  1:502192/1‑140 (MQ=255)
                                  tGCATAAGTTACTACATTCCAATGGAGCCACCGCAATCAGAACACTGCTTTAAATCCGGTTTTGATTTTCTTATTACAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTGTGAAGCGGCGAACacaa                                                                                                         >  2:469965/1‑140 (MQ=255)
                                     aTCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCgcatagtcattttctttacatgcgtgct                                                                                                      >  1:130767‑M2/1‑112 (MQ=255)
                                      tCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGAAATATCAGACATACTCTGAAGCGGTGAACAAAAATAg                                                                                                     <  1:322015/140‑1 (MQ=255)
                                           tagtaCATTCCAATGGAGACAACAAGGTCAACATCATGCTTTGAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAg                                                                                                <  2:91491/140‑1 (MQ=255)
                                              caCATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGTAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATc                                                                                             <  1:564876/139‑1 (MQ=255)
                                                       aTGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGAc                                                                                    >  1:423444/1‑140 (MQ=255)
                                                        tGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACa                                                                                   >  1:65017/1‑140 (MQ=255)
                                                          gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCcatagtcattttctttacatgcgtgctgcaataagaaaatagattccg                                                                                   >  2:612410‑M2/1‑92 (MQ=255)
                                                          gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccg                                                                                 >  2:278596‑M2/1‑91 (MQ=255)
                                                          gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACAtt                                                                                 <  1:283788/140‑1 (MQ=255)
                                                           agaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACAttt                                                                                <  1:583364/140‑1 (MQ=255)
                                                                acaaGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGAGCACATTAGACATTTACTTg                                                                           >  1:286128/1‑140 (MQ=255)
                                                                 caaGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGa                                                                          >  2:607829/1‑140 (MQ=255)
                                                                        aaCATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTaaa                                                                   <  1:645887/140‑1 (MQ=255)
                                                                          catcatGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGc                                                                 <  2:530248/140‑1 (MQ=255)
                                                                           atcatGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCa                                                                >  2:420892/1‑140 (MQ=255)
                                                                             catGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACGATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGAAATTTACTTCAATTTAAAGCagg                                                              >  2:465959/1‑138 (MQ=255)
                                                                              atGCTTTTAATCCGGAATCTAGTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACACTGAAGCGGTGAACAAAAATAGAACAGATCACAAAAGACAGTTAATTCAATTaaagtaaaat                                                             >  2:457630/1‑133 (MQ=255)
                                                                                  ttttTATCCGGAAGCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACGGATCACATTAGACATTTACTTGAATTTAAAGCATGGacac                                                         <  1:476012/140‑1 (MQ=255)
                                                                                  ttttAATTCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAAGAGAACAGACCACATTAGACATTTACTTGAATTTAAAGCATGTacac                                                         <  1:455532/140‑1 (MQ=255)
                                                                                     tcaTCCGGAATCGATTTTCGTATGGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAACAATAGACCAGAGCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGa                                                      <  2:109677/138‑1 (MQ=255)
                                                                                     tAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTGTGCGCAATTTAAAGCATACTCTGAAGCGGTGAACATAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAGGCATGTACACCGa                                                      >  2:492212/1‑140 (MQ=255)
                                                                                      aaTCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGAt                                                     <  1:577858/140‑1 (MQ=255)
                                                                                        tCCGGAATCTATTTGATTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGTGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTg                                                   <  1:203213/140‑1 (MQ=255)
                                                                                          cGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCgcaatttaaagcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctc                                                  >  2:612410‑M1/1‑49 (MQ=255)
                                                                                          cGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCgcaatttaaagcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctc                                                  >  2:278596‑M1/1‑49 (MQ=255)
                                                                                            gAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACAt                                               <  1:298275/140‑1 (MQ=255)
                                                                                            gAATCTATTTTCTTATTGCAGCAAGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACAt                                               <  1:577944/140‑1 (MQ=255)
                                                                                               tCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGa                                            <  2:212649/140‑1 (MQ=255)
                                                                                               tCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACACTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGACTTTAAAGCATGTACACCGATTGAAATCGa                                            >  1:207076/1‑140 (MQ=255)
                                                                                                cgaTTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCACGTACACCCACCGCCATCGAc                                           <  2:660588/138‑1 (MQ=255)
                                                                                                ccaTTTTCTTATTGCACCACGCAAGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTGTACATTTCCTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                           <  2:633608/138‑1 (MQ=255)
                                                                                                cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                           >  1:530840/1‑140 (MQ=255)
                                                                                                cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                           >  1:372300/1‑140 (MQ=255)
                                                                                                cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGAACACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGaa                                           >  1:238394/1‑139 (MQ=255)
                                                                                                 tATTTTCTTATTGCAGCACGCATGTAACGAAAATCGCTATGCGCAATTTAAAGCATAATCTGAAGCGGAGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTCCACCGCTTGACATCGAcc                                          >  1:191151/1‑140 (MQ=255)
                                                                                                   ttttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAAAACAGATAACATTAGACATTTACATGAATTCAAAGCATGTACACCGATTGACATCGACCaa                                        >  1:270945/1‑140 (MQ=255)
                                                                                                    tttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAg                                       <  1:607829/140‑1 (MQ=255)
                                                                                                    ttacTTATTGCAGCATGCATGTAAAGAAAATGACTATTCGCAATTCAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATTACAGTAGACATTTGCTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAg                                       <  2:502192/137‑1 (MQ=255)
                                                                                                     ttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAACGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGGATTTAAAGCATGTACACCGATTGCCACCGACAAAGt                                      >  2:56418/1‑140 (MQ=255)
                                                                                                        ttATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGa                                   <  2:65017/140‑1 (MQ=255)
                                                                                                             gcagcaCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCgg                              >  2:602473/1‑140 (MQ=255)
                                                                                                               agcaCGCATGTAAAGAAAATGACTATGCgcaatttaaagcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgat                             >  1:130767‑M1/1‑28 (MQ=255)
                                                                                                                 caCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAg                          <  1:268069/140‑1 (MQ=255)
                                                                                                                  aCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGt                         <  1:427209/140‑1 (MQ=255)
                                                                                                                     aaTGTAAACAAAATGACTATGCGCAATTTAAAGCATACTCTGATACAAAAAAAAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGAc                      <  2:340352/139‑1 (MQ=255)
                                                                                                                       tGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATAAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACAt                    >  1:90463/1‑140 (MQ=255)
                                                                                                                          aaaGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGt                 <  2:392472/140‑1 (MQ=255)
                                                                                                                           aaGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTc                <  1:599221/140‑1 (MQ=255)
                                                                                                                               aaaTGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAAc            <  1:113469/140‑1 (MQ=255)
                                                                                                                               aaaTGACGATTCGCAATTTAAAGCATACTCTGAAGCGGTGAACTAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAAc            <  2:395915/140‑1 (MQ=255)
                                                                                                                                aaTGACTATGCGCAATTTAAAgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgatgcaagataattatcatc           >  1:612410‑M2/1‑21 (MQ=255)
                                                                                                                                aaTGACTATGCGCAATTTAAAgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgatgcaagataattatcatc           >  1:278596‑M2/1‑21 (MQ=255)
                                                                                                                                aaTGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCGAACg           <  2:462494/140‑1 (MQ=255)
                                                                                                                                  tGACTATGCGCAATTTAAAGCATACTCTGAAGCGGGGAACAACAATAGAACAGATCACATTAGACATTTACATGAATTTAAAACATGTACACCTAACATCATCGACACAATTGCACCGGTAAGTGACATTGACAAACGcg         >  1:138032/1‑139 (MQ=255)
                                                                                                                                    aCTATGCGCAATTTAATGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCttt       >  1:372191/1‑140 (MQ=255)
                                                                                                                                     cTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGATATTGTCAAACGCTTTa      <  1:330386/140‑1 (MQ=255)
                                                                                                                                      tATGCtttaaatggcgtatagacagtttctttacatgggtggtccaataagaaaatagattccggattaaaagcatgatgttgtccttgttgtctccattggaatgtactacctgatgcaagataattatcatcactttg      <  2:340449‑M1/140‑136 (MQ=255)
                                                                                                                                      tATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATAAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTaa     >  1:206346/1‑140 (MQ=255)
                                                                                                                                         gCtttaaattgcgcatagttattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttcttgtctccattggaatgtactacctgatgcaagataattatcatcactttgttg   <  1:445077‑M1/140‑139 (MQ=255)
                                                                                                                                          ctttaaattgcgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgatgcaagataattatcatcactttgttga  <  2:213976‑M1/140‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                           
ATAAAGCACGTCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATAC  >  CP000730/499575‑499851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.