New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 49971359 (1.060)5 (0.090) 3/248 NT 8.0% coding (2417/4500 nt) gltB1 glutamate synthase (NADPH), large subunit
?CP000730 = 499723 58 (1.090)coding (2427/4500 nt) gltB1 glutamate synthase (NADPH), large subunit

TCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGATGA  >  CP000730/499585‑499862
                                                                                                                                           |                                                                                                                                           
tCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAg                                                                                                                                            <  2:213976‑M2/140‑2 (MQ=255)
 caacaaAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAAGAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATAACTATGCGCAATTTAAAgc                                                                                                                                           <  1:445077‑M2/140‑3 (MQ=255)
    caaAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGACAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGGACCACCCATGTAAAGAAACTGTCTATACGCCATTTAAAgcata                                                                                                                                        <  2:340449‑M2/140‑6 (MQ=255)
       aGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATActc                                                                                                                                     <  2:464884/140‑1 (MQ=255)
        gTGATGATAAGTATCTTGCATCAGGTAGTAAATTCCGATGGAGATAACGAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGTAAGTGACTATGCGCACGTTACAGCATActct                                                                                                                                    <  2:441172/140‑1 (MQ=255)
           atgatAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGaa                                                                                                                                 >  2:560157/1‑140 (MQ=255)
               caaTTATCCTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTATTTTATACTCTGAAGCgg                                                                                                                             <  1:460821/139‑1 (MQ=255)
                  ttATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTTTTATTGCAGTACGCATGTAAAGAAAATGACTATGCGCAATGTAAAGCATACTCTGAAGCGGTGa                                                                                                                          <  1:174811/140‑1 (MQ=255)
                     tCTTGCATCAGGTAGTACATTCCAATGGTGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACa                                                                                                                       <  2:315098/140‑1 (MQ=255)
                     tCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACa                                                                                                                       >  2:599221/1‑140 (MQ=255)
                       ttGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACaaa                                                                                                                     >  1:502192/1‑140 (MQ=255)
                        tGCATAAGTTACTACATTCCAATGGAGCCACCGCAATCAGAACACTGCTTTAAATCCGGTTTTGATTTTCTTATTACAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTGTGAAGCGGCGAACacaa                                                                                                                    >  2:469965/1‑140 (MQ=255)
                           aTCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCgcatagtcattttctttacatgcgtgct                                                                                                                 >  1:130767‑M2/1‑112 (MQ=255)
                            tCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGAAATATCAGACATACTCTGAAGCGGTGAACAAAAATAg                                                                                                                <  1:322015/140‑1 (MQ=255)
                                 tagtaCATTCCAATGGAGACAACAAGGTCAACATCATGCTTTGAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAg                                                                                                           <  2:91491/140‑1 (MQ=255)
                                    caCATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGTAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATc                                                                                                        <  1:564876/139‑1 (MQ=255)
                                             aTGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGAc                                                                                               >  1:423444/1‑140 (MQ=255)
                                              tGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACa                                                                                              >  1:65017/1‑140 (MQ=255)
                                                gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCcatagtcattttctttacatgcgtgctgcaataagaaaatagattccg                                                                                              >  2:612410‑M2/1‑92 (MQ=255)
                                                gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCTTTAAATTGCgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccg                                                                                            >  2:278596‑M2/1‑91 (MQ=255)
                                                gagaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACAtt                                                                                            <  1:283788/140‑1 (MQ=255)
                                                 agaCAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACAttt                                                                                           <  1:583364/140‑1 (MQ=255)
                                                      acaaGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGAGCACATTAGACATTTACTTg                                                                                      >  1:286128/1‑140 (MQ=255)
                                                       caaGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGa                                                                                     >  2:607829/1‑140 (MQ=255)
                                                              aaCATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTaaa                                                                              <  1:645887/140‑1 (MQ=255)
                                                                catcatGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGc                                                                            <  2:530248/140‑1 (MQ=255)
                                                                 atcatGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCa                                                                           >  2:420892/1‑140 (MQ=255)
                                                                   catGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACGATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGAAATTTACTTCAATTTAAAGCagg                                                                         >  2:465959/1‑138 (MQ=255)
                                                                    atGCTTTTAATCCGGAATCTAGTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACACTGAAGCGGTGAACAAAAATAGAACAGATCACAAAAGACAGTTAATTCAATTaaagtaaaat                                                                        >  2:457630/1‑133 (MQ=255)
                                                                        ttttTATCCGGAAGCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACGGATCACATTAGACATTTACTTGAATTTAAAGCATGGacac                                                                    <  1:476012/140‑1 (MQ=255)
                                                                        ttttAATTCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAAGAGAACAGACCACATTAGACATTTACTTGAATTTAAAGCATGTacac                                                                    <  1:455532/140‑1 (MQ=255)
                                                                           tcaTCCGGAATCGATTTTCGTATGGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAACAATAGACCAGAGCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGa                                                                 <  2:109677/138‑1 (MQ=255)
                                                                           tAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTGTGCGCAATTTAAAGCATACTCTGAAGCGGTGAACATAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAGGCATGTACACCGa                                                                 >  2:492212/1‑140 (MQ=255)
                                                                            aaTCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGAt                                                                <  1:577858/140‑1 (MQ=255)
                                                                              tCCGGAATCTATTTGATTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGTGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTg                                                              <  1:203213/140‑1 (MQ=255)
                                                                                  gAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACAt                                                          <  1:298275/140‑1 (MQ=255)
                                                                                  gAATCTATTTTCTTATTGCAGCAAGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACAt                                                          <  1:577944/140‑1 (MQ=255)
                                                                                     tCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGa                                                       <  2:212649/140‑1 (MQ=255)
                                                                                     tCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACACTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGACTTTAAAGCATGTACACCGATTGAAATCGa                                                       >  1:207076/1‑140 (MQ=255)
                                                                                      cgaTTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCACGTACACCCACCGCCATCGAc                                                      <  2:660588/138‑1 (MQ=255)
                                                                                      ccaTTTTCTTATTGCACCACGCAAGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTGTACATTTCCTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                                      <  2:633608/138‑1 (MQ=255)
                                                                                      cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                                      >  1:530840/1‑140 (MQ=255)
                                                                                      cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGAc                                                      >  1:372300/1‑140 (MQ=255)
                                                                                      cTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGAACACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGaa                                                      >  1:238394/1‑139 (MQ=255)
                                                                                       tATTTTCTTATTGCAGCACGCATGTAACGAAAATCGCTATGCGCAATTTAAAGCATAATCTGAAGCGGAGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTCCACCGCTTGACATCGAcc                                                     >  1:191151/1‑140 (MQ=255)
                                                                                         ttttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAAAACAGATAACATTAGACATTTACATGAATTCAAAGCATGTACACCGATTGACATCGACCaa                                                   >  1:270945/1‑140 (MQ=255)
                                                                                          tttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAg                                                  <  1:607829/140‑1 (MQ=255)
                                                                                          ttacTTATTGCAGCATGCATGTAAAGAAAATGACTATTCGCAATTCAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATTACAGTAGACATTTGCTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAg                                                  <  2:502192/137‑1 (MQ=255)
                                                                                           ttCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAACGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGGATTTAAAGCATGTACACCGATTGCCACCGACAAAGt                                                 >  2:56418/1‑140 (MQ=255)
                                                                                              ttATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGa                                              <  2:65017/140‑1 (MQ=255)
                                                                                                   gcagcaCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCgg                                         >  2:602473/1‑140 (MQ=255)
                                                                                                       caCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAg                                     <  1:268069/140‑1 (MQ=255)
                                                                                                        aCGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGt                                    <  1:427209/140‑1 (MQ=255)
                                                                                                           aaTGTAAACAAAATGACTATGCGCAATTTAAAGCATACTCTGATACAAAAAAAAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGAc                                 <  2:340352/139‑1 (MQ=255)
                                                                                                             tGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATAAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACAt                               >  1:90463/1‑140 (MQ=255)
                                                                                                                aaaGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGt                            <  2:392472/140‑1 (MQ=255)
                                                                                                                 aaGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTc                           <  1:599221/140‑1 (MQ=255)
                                                                                                                     aaaTGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAAc                       <  1:113469/140‑1 (MQ=255)
                                                                                                                     aaaTGACGATTCGCAATTTAAAGCATACTCTGAAGCGGTGAACTAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAAc                       <  2:395915/140‑1 (MQ=255)
                                                                                                                      aaTGACTATGCGCAATTTAAAgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgatgcaagataattatcatc                      >  1:612410‑M2/1‑21 (MQ=255)
                                                                                                                      aaTGACTATGCGCAATTTAAAgcatagtcattttctttacatgcgtgctgcaataagaaaatagattccggattaaaagcatgatgttgaccttgttgtctccattggaatgtactacctgatgcaagataattatcatc                      >  1:278596‑M2/1‑21 (MQ=255)
                                                                                                                      aaTGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCGAACg                      <  2:462494/140‑1 (MQ=255)
                                                                                                                        tGACTATGCGCAATTTAAAGCATACTCTGAAGCGGGGAACAACAATAGAACAGATCACATTAGACATTTACATGAATTTAAAACATGTACACCTAACATCATCGACACAATTGCACCGGTAAGTGACATTGACAAACGcg                    >  1:138032/1‑139 (MQ=255)
                                                                                                                          aCTATGCGCAATTTAATGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCttt                  >  1:372191/1‑140 (MQ=255)
                                                                                                                           cTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGATATTGTCAAACGCTTTa                 <  1:330386/140‑1 (MQ=255)
                                                                                                                            tATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATAAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTaa                >  1:206346/1‑140 (MQ=255)
                                                                                                                                    aaTTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAggg         <  1:421275/140‑1 (MQ=255)
                                                                                                                                    aaTTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATAAAggg         >  1:382959/1‑140 (MQ=255)
                                                                                                                                       ttAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCg      <  1:542542/140‑1 (MQ=255)
                                                                                                                                        tAAAGCATACTCTGAAGTCGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTTACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGa     <  1:14323/140‑1 (MQ=255)
                                                                                                                                        tAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACTGATCTCATTAGACATTTACTTGAATTTAAAGCATGTACTCCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGa     <  1:579957/140‑1 (MQ=255)
                                                                                                                                          aaGCATACTCTGAAGCGGTGAACAAAAATAGAACAGTTCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGATTAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGATg   <  1:121796/140‑1 (MQ=255)
                                                                                                                                           aGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGATGa  <  1:213976/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TCAACAAAGTGATGATAATTATCTTGCATCAGGTAGTACATTCCAATGGAGACAACAAGGTCAACATCATGCTTTTAATCCGGAATCTATTTTCTTATTGCAGCACGCATGTAAAGAAAATGACTATGCGCAATTTAAAGCATACTCTGAAGCGGTGAACAAAAATAGAACAGATCACATTAGACATTTACTTGAATTTAAAGCATGTACACCGATTGACATCGACCAAGTTGAACCGGTAAGTGACATTGTCAAACGCTTTAATACAGGGGCGATGA  >  CP000730/499585‑499862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.