New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 16077	60 (0.940)	3 (0.050)	3/266	11.0	4.5%	intergenic (+307/‑56)	azlD/metX	possible membrane protein/possible homoserine O‑acetyltransferase
	?	CP000730	= 16108	70 (1.130)					intergenic (+338/‑25)	azlD/metX	possible membrane protein/possible homoserine O‑acetyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/15936‑16077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTATCATTCGAGTAACTCGTTGGTTTTAGCACCGTGCTATAAAGTCGGTTGCTGAAGTATCACAGGGCCAAGTCCCTCAACTTCTCACAATAAGAAATATGA  <  CP000730/16108‑15969                                                                                                                                                                                                                                                                                            TCATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAA                                                                                                                                               >  1:599509/1‑141  CATCACTGAATCTCAACTAACACATCACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAA                                                                                                                                              <  1:76950/141‑1  CATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAA                                                                                                                                              >  2:671582/1‑141                                           TTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTATAACCAACGTGTTACTCGAATGATAAGTATAAAAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTA                                                                                                     <  1:33970/141‑1                                                                                         CGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAAACTTCTCACCCTATTGAAAAGTAAGAAGTCT                                                                                                              <  1:345218/86‑1                                                                                         CGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAAACTTCTCACCCTATTGAAAAGTAAGAAGTCT                                                                                                              >  2:345218/1‑86                                                                                                                                             AAAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTATCATTCGAGTAACTCGTTGGTTTTAGCACCGTGCTATAAAGTCGGTTGCTGAAGTATCACAGGGCCAAGTCCCTCAACTTCTCACAATAAGAAATATG   >  1:348961/1‑141                                                                                                                                             AAAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTATCATTCGAGTAACTCGTTGGTTTTAGCACCGTGCTATAAAGTCGGTTGCTGAAGTATCACAGGGCCAAGTCCCTCAACTTCTCACAATAAGAAATATG   >  2:264094/1‑141                                                                                                                                              AAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTATCATTCGAGTAACTCGTTGGTTTTAGCACCGTGCTATAAAGTCGGTTGCTGAAGTATCACAGGGCCAAGTCCCTCAACTTCTCACAATAAGAAATATGA  <  2:256123/141‑1                                                                                                                                                                                                                                                                                            TCATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/15936‑16077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaAACTTCTCACCCTATTGAAAAGTAAGAAGTCTTTATACTTATCATTCGAGTAACTCGTTGGTTTTAGCACCGTGCTATAAAGTCGGTTGCTGAAGTATCACAGGGCCAAGTCCCTCAACTTCTCACAATAAGAAATATGA  <  CP000730/16108‑15969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.