| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 16077 | 60 (0.940) | 3 (0.050) | 3/266 | 11.0 | 4.5% | intergenic (+307/‑56) | azlD/metX | possible membrane protein/possible homoserine O‑acetyltransferase |
| ? | CP000730 | = 16108 | 70 (1.130) | intergenic (+338/‑25) | azlD/metX | possible membrane protein/possible homoserine O‑acetyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCGTTTG > CP000730/15937‑16213 | catcaCTGAATCTCAACTAACACATCACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATaaa < 1:76950/141‑1 (MQ=255)catcaCTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATaaa > 2:671582/1‑141 (MQ=255) caCTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGAc < 2:627677/141‑1 (MQ=255) cTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGActt < 2:607400/141‑1 (MQ=255) tGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGActtc < 2:336614/141‑1 (MQ=255) tctcAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTAc > 2:367623/1‑141 (MQ=255) cAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACttt < 2:332811/141‑1 (MQ=255) aaCTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACtttt < 1:538168/141‑1 (MQ=255) aCTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACtttta > 1:18680/1‑140 (MQ=255) tCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGttt > 2:256123/1‑141 (MQ=255) cATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGtttt < 2:264094/141‑1 (MQ=255) cATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGtttt < 1:348961/141‑1 (MQ=255) tttCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTg > 1:511793/1‑141 (MQ=255) tttCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTg > 1:639768/1‑141 (MQ=255) ttATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTa < 1:402468/141‑1 (MQ=255) tATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTaa > 1:174617/1‑141 (MQ=255) gtgAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAaggag > 1:563178/1‑141 (MQ=255) agaAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGaa < 2:116164/141‑1 (MQ=255) aaGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAg < 2:669609/141‑1 (MQ=255) gAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACaa > 1:608525/1‑141 (MQ=255) gAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACaa > 2:187831/1‑141 (MQ=255) gAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACaa > 1:562721/1‑141 (MQ=255) gggACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATg > 2:604981/1‑141 (MQ=255) ggACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGa < 2:58365/141‑1 (MQ=255) aaCTTTGCCCTGTTATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGAc < 2:177177/140‑1 (MQ=255) ggCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAAtt > 2:188424/1‑141 (MQ=255) ggCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTCACGGCGGCAACAACAATGACACAtc > 1:679518/1‑140 (MQ=255) cccTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTac > 2:425646/1‑141 (MQ=255) cccTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTac > 1:193901/1‑141 (MQ=255) tACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGttttttt < 2:98238/102‑1 (MQ=255) tACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGttttttt > 1:98238/1‑102 (MQ=255) aCTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGAt < 2:4497/141‑1 (MQ=255) cTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATa > 2:310904/1‑141 (MQ=255) cTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATa < 2:168603/141‑1 (MQ=255) aGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACttt < 1:188424/141‑1 (MQ=255) aCCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAAt > 1:287043/1‑141 (MQ=255) aCTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAg > 1:618479/1‑141 (MQ=255) cTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAgg > 2:262836/1‑141 (MQ=255) ttATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAgggg < 2:551979/141‑1 (MQ=255) aCGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATttat < 2:38282/141‑1 (MQ=255) ggTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATttatta < 2:522823/141‑1 (MQ=255) ggTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATttatta < 2:444224/141‑1 (MQ=255) tGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACa < 2:562721/141‑1 (MQ=255) gCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAg > 2:188684/1‑141 (MQ=255) tAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGaa < 1:604981/141‑1 (MQ=255) aaaaCCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAAt < 2:511793/141‑1 (MQ=255) aaCCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCt > 2:38998/1‑141 (MQ=255) ccAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTgg > 2:20826/1‑141 (MQ=255) cAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTggg > 2:331843/1‑141 (MQ=255) cGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGaa > 2:407103/1‑141 (MQ=255) cGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGaa > 2:113194/1‑141 (MQ=255) aCTCGAATGATAAGTATAAAGACTTCTTACTTCTCAATAGGGTGAGAAGTCTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTGAGGGGAATTTATTACAGAATCTGGGGAAGTCATa > 2:48297/1‑141 (MQ=255) cTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAGGTAGGAAAGCACAATGACAAATTACACAGTAGATCCTTTCAATTTAGCGGAATTTATTAAAGAATATGGGGACGTAATat > 2:566935/1‑140 (MQ=255) cTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAg < 2:618479/141‑1 (MQ=255) tCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGa > 2:618577/1‑141 (MQ=255) gAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATATATTACAGAATCTGGGGAAGTCATAGATa > 1:518241/1‑141 (MQ=255) tGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGCAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACt < 1:520765/141‑1 (MQ=255) tGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACt < 1:61034/141‑1 (MQ=255) aaGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCg > 1:408034/1‑141 (MQ=255) aaGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCg > 2:68497/1‑141 (MQ=255) aGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCGt < 1:490591/141‑1 (MQ=255) ataAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCGTTTg < 2:562456/141‑1 (MQ=255) | CATCACTGAATCTCAACTAACACATAACAATTTCATATTTCTTATTGTGAGAAGTTGAGGGACTTGGCCCTGTGATACTTCAGCAACCGACTTTATAGCACGGTGCTAAAACCAACGAGTTACTCGAATGATAAGTATAAAGACTTCTTACTTTTCAATAGGGTGAGAAGTTTTTTTGTTTAAGGAGGAAAGAACAATGACAAATTACACAGTAGATACTTTAAATTTAGGGGAATTTATTACAGAATCTGGGGAAGTCATAGATAACTTGCGTTTG > CP000730/15937‑16213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |