Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC CP000730 1,302,967 Δ4 bp 100% coding (325‑328/714 nt) USA300HOU_1209 → possible GntR family transcriptional regulator

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP000730 1302967 1302970 4 74 [0] [1] 75 USA300HOU_1209 possible GntR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 13029660 (0.000)70 (1.120) 49/256 NT 100% coding (324/714 nt) USA300HOU_1209 possible GntR family transcriptional regulator
?CP000730 1302971 = 0 (0.000)coding (329/714 nt) USA300HOU_1209 possible GntR family transcriptional regulator

TTTGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACA  >  CP000730/1302829‑1303101
                                                                                                                                         |                                                                                                                                       
tttGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATAATTAAAAAAACAGGATTTAAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCATCAtg                                                                                                                                       >  1:59031‑M1/1‑138 (MQ=255)
     agagGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttaga                                                                                                                                  <  1:67608‑M1/140‑8 (MQ=255)
        gggCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgc                                                                                                                               <  1:638443‑M1/140‑11 (MQ=255)
        gggCACAAGTGTTAAGTCACAGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTCTTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACCGAATACTTAAATTTAGATGAGCAACCAGCAtgttagaaac                                                                                                                               >  1:443354‑M1/1‑130 (MQ=255)
          gCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCATGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaa                                                                                                                             <  2:306854‑M1/140‑13 (MQ=255)
            acaAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaat                                                                                                                           >  2:385627‑M1/1‑126 (MQ=255)
             caAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAAGCAGCAtgataggagcacaac                                                                                                                          >  2:646078‑M1/1‑125 (MQ=255)
               aGTGTTAAGTCACTGCCCGCTTCCTTTTATCCATTGAATGAACTTATAAGTATGGGGAAATGGATTAAAAATGCAGGATGTGAATGCGGAACTGAATACTTAAATTTTGATGAGGAACCAGCAtgttagatgcaaatttg                                                                                                                        <  2:459220‑M1/140‑18 (MQ=255)
               aGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttg                                                                                                                        <  1:365083‑M1/140‑18 (MQ=255)
                gtgtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGATCTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgaaaatttgt                                                                                                                       <  2:535962‑M1/140‑19 (MQ=255)
                  gtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttg                                                                                                                     <  1:47093‑M1/140‑21 (MQ=255)
                  gtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttg                                                                                                                     <  2:129269‑M1/140‑21 (MQ=255)
                      aGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcg                                                                                                                 <  1:427695‑M1/140‑25 (MQ=255)
                           cTGCCCCCTTTCTTTTATCCCTTGAATGAACTTATAAGTATGGGGCAAATGAGTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaa                                                                                                            >  1:145442‑M1/1‑111 (MQ=255)
                           cTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaactttgttgagcgttgaa                                                                                                            <  1:363366‑M1/140‑30 (MQ=255)
                              cccccTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTNTGATGAGCAACCAGCAtggtagatgcaaatttgttgagcattgaagaa                                                                                                         >  1:614391‑M1/1‑108 (MQ=255)
                               ccccTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttaaagaag                                                                                                        >  1:118959‑M1/1‑107 (MQ=255)
                                   tttctttTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggata                                                                                                    <  1:156977‑M1/140‑38 (MQ=255)
                                   tttctttGATCCATTGAATGGCCTGAGAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggata                                                                                                    <  1:163187‑M1/140‑38 (MQ=255)
                                    ttttgttatccaTTGAATGAACTTAGAAGTATTGTGAAAATGATTAAAAATGCAGGATTGGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatat                                                                                                   <  1:359837‑M1/135‑39 (MQ=255)
                                    ttctttTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatat                                                                                                   <  1:94671‑M1/140‑39 (MQ=255)
                                    ttctttTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatat                                                                                                   <  1:641096‑M1/140‑39 (MQ=255)
                                       ttttATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatcca                                                                                                >  2:252553‑M1/1‑99 (MQ=255)
                                       ttttATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACAGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatatgttgagcgttgaagaaggatagcca                                                                                                >  2:433211‑M1/1‑99 (MQ=255)
                                        tttATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAATTTTGTTTTACCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccag                                                                                               >  1:345778‑M1/1‑98 (MQ=255)
                                          tATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccggta                                                                                             >  1:91321‑M1/1‑96 (MQ=255)
                                              cATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAAATTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaacca                                                                                         >  1:265162‑M1/1‑92 (MQ=255)
                                              cATTGAATGAACTTACAAGCATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaacca                                                                                         >  1:541617‑M1/1‑92 (MQ=255)
                                              cATTGAATGAAATTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAAAGCGGAAATGAATACTTAAATTTTGATGAGCAACAAGCAtgttagatgcaaatttgttgcgcgttgaagaaggatatacagtaaaca                                                                                         >  2:176615‑M1/1‑92 (MQ=255)
                                              cATTGAATCAACTTAGAATTATTAGGCAAATGATTAAAAATGCAGCATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgtggagcgttgaagaaggatatccagtaacca                                                                                         <  2:149228‑M1/140‑49 (MQ=255)
                                                ttGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGGTTTGAATGCGGAACTGAATACTTAAATTTTGATGAACAACCAGCAtgttaaatgcaaatttgttgagcgttgaagaaggatatccattaaccatt                                                                                       >  1:694921‑M1/1‑90 (MQ=255)
                                                ttGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggaaatccagtaaccatt                                                                                       >  1:25410‑M1/1‑90 (MQ=255)
                                                    atgaaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatag                                                                                   <  1:131648‑M1/140‑55 (MQ=255)
                                                       aaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaac                                                                                >  1:490771‑M1/1‑83 (MQ=255)
                                                       aaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaac                                                                                >  1:273809‑M1/1‑83 (MQ=255)
                                                       aaCTTATAAGTATTGGGAAAATGATTAAAAATGCAGGATTTGAATGCGGAACGGAATACTTAAATTTTGATGAGCAACCATCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaac                                                                                <  2:684927‑M1/140‑58 (MQ=255)
                                                        aCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacg                                                                               >  1:273202‑M1/1‑82 (MQ=255)
                                                                   ttGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattctagaacgattacgaactg                                                                    >  2:47637‑M1/1‑71 (MQ=255)
                                                                   ttGGGCAAATGATCAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactg                                                                    <  2:167623‑M1/140‑70 (MQ=255)
                                                                       gCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccga                                                                >  2:726123‑M1/1‑67 (MQ=255)
                                                                       gCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatataatgagcgttgaagaaggatatccagtaacaattatagaacggttacgaactgccga                                                                >  1:137953‑M1/1‑67 (MQ=255)
                                                                           aTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattccgaactgccaaggga                                                            >  2:46214‑M1/1‑63 (MQ=255)
                                                                            tgaatcaaaattcaggATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggag                                                           <  1:163148‑M1/134‑79 (MQ=255)
                                                                            tGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgatagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggag                                                           >  1:665115‑M1/1‑62 (MQ=255)
                                                                             gATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgtaagatgcaaatttgttgagcgttgaagaaggatatccattaaccattatagaacgattacaaactagcgatggaaa                                                          >  2:414398‑M1/1‑61 (MQ=255)
                                                                              atcaaaaatgcAGGATTTGAATGCGGAACTGAATACTTAAATTGTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaataaggatatccagtaaccatcatagaccgcttactaactgccgatggagaa                                                         <  2:156410‑M1/137‑81 (MQ=255)
                                                                              aataaAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaacgagatccagtaaccattatagaacgattacgaactgccgatggagaa                                                         <  2:298181‑M1/138‑81 (MQ=255)
                                                                              aTTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAGATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaa                                                         <  1:513801‑M1/140‑81 (MQ=255)
                                                                              aTTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatgtggaa                                                         >  2:138099‑M1/1‑60 (MQ=255)
                                                                               ttAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaac                                                        >  1:611905‑M1/1‑59 (MQ=255)
                                                                                tAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatagccagtaaccattatagaacgattacgaactgccgatggagaacc                                                       <  1:383969‑M1/140‑83 (MQ=255)
                                                                                     aTGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcg                                                  <  2:677921‑M1/140‑88 (MQ=255)
                                                                                        cAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagcaccggtcgtct                                               >  2:184138‑M1/1‑50 (MQ=255)
                                                                                        cAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagacccggtcgtct                                               >  1:726130‑M1/1‑50 (MQ=255)
                                                                                                gAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtggtagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgttta                                       <  1:376834‑M1/140‑99 (MQ=255)
                                                                                                  aTGCGGAACTGAATACTTNTATTTTGATGAGCAACCTGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtagtcattcgaaaactattacgaactgccgatggagaaccggtcgtctattgtttaga                                     <  1:646078‑M1/140‑101 (MQ=255)
                                                                                                     cGGAATTGAATAGTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccatcatagaacgattacgaactgccgagggagaaccggtcgtctattgtttatataa                                  <  2:443354‑M1/140‑104 (MQ=255)
                                                                                                        aaCTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaat                               <  2:577508‑M1/140‑107 (MQ=255)
                                                                                                            gAATTCTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgct                           <  1:101218‑M1/140‑111 (MQ=255)
                                                                                                             aaTACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgcta                          >  2:393485‑M1/1‑29 (MQ=255)
                                                                                                                 cTTAAATTTTTATGAGCAACCAGCAtgttagatgcaaattggttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaa                      <  2:232961‑M1/140‑116 (MQ=255)
                                                                                                                        tttGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgacgaaggctatccagtcaccattatagaacgattacgaactgatgatgtacaaccgttcgtcaattgtttagataaaattgcttaaatagaatta               >  1:275559‑M1/1‑18 (MQ=255)
                                                                                                                        tttGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaatta               >  2:493041‑M1/1‑18 (MQ=255)
                                                                                                                        tttGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattaagaattgtcttagaagaaccggtcgtctattgtttagataaaattgctaaaaaagaatta               >  1:680577‑M1/1‑18 (MQ=255)
                                                                                                                         ctgatggcCAACCCGCGtgttagatgtatatttgtttagcgttgaagaatgatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaa              <  2:498291‑M1/139‑124 (MQ=255)
                                                                                                                           gatgaGTAACGAGCAtgttagatggaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattccgacctgtcgaaggagaaccggtcgtctattgtttagataaaataaataaaaaagaattaaca            <  2:545689‑M1/140‑126 (MQ=255)
                                                                                                                           gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaacagaattaaca            >  2:428784‑M1/1‑15 (MQ=255)
                                                                                                                           gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaaca            <  2:345778‑M1/140‑126 (MQ=255)
                                                                                                                           gatgaGCAAACAGCAtgtcagatgcgaagtgtttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaaca            <  2:74862‑M1/140‑126 (MQ=255)
                                                                                                                           aagcagcaaCCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctgagctatatttaaaattgatataaaagaattaaca            <  2:666148‑M1/136‑126 (MQ=255)
                                                                                                                                   aCCAGCAtgttcgatgcacatttgttgcgcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacagg    >  1:661033‑M1/1‑7 (MQ=255)
                                                                                                                                    ccAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacagag   >  1:451850‑M1/1‑6 (MQ=255)
                                                                                                                                    ccAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaaaatgtacagag   >  1:451950‑M1/1‑6 (MQ=255)
                                                                                                                                     cAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacagagt  <  1:726123‑M1/140‑136 (MQ=255)
                                                                                                                                         |                                                                                                                                       
TTTGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACA  >  CP000730/1302829‑1303101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.