Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC CP000730 1,302,967 Δ4 bp 100% coding (325‑328/714 nt) USA300HOU_1209 → possible GntR family transcriptional regulator

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP000730 1302967 1302970 4 74 [0] [1] 75 USA300HOU_1209 possible GntR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 13029660 (0.000)70 (1.120) 49/256 NT 100% coding (324/714 nt) USA300HOU_1209 possible GntR family transcriptional regulator
?CP000730 1302971 = 0 (0.000)coding (329/714 nt) USA300HOU_1209 possible GntR family transcriptional regulator

AAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGTAT  >  CP000730/1302833‑1303107
                                                                                                                                          |                                                                                                                                        
tttgaagagggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaataattaaaaaaacaggatttaaatgcggaactgaatacttaaattttgatgagcaaccatcaTg                                                                                                                                         >  1:59031‑M2/139‑140 (MQ=255)
     agagggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGa                                                                                                                                    <  1:67608‑M2/7‑1 (MQ=255)
        gggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGc                                                                                                                                 <  1:638443‑M2/10‑1 (MQ=255)
        gggcacaagtgttaagtcacagccccctttcttttatccattgaatgaacttataagtcttgggcaaatgattaaaaatgcaggatttgaatgcggaaccgaatacttaaatttagatgagcaaccagcaTGTtagaaac                                                                                                                                 >  1:443354‑M2/131‑137 (MQ=255)
          gcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcatgatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCaa                                                                                                                               <  2:306854‑M2/12‑1 (MQ=255)
            acaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAAt                                                                                                                             >  2:385627‑M2/127‑140 (MQ=255)
             caagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaagcagcatgataggagcacaac                                                                                                                            >  2:646078‑M2/126‑131 (MQ=255)
               agtgttaagtcactgcccgcttccttttatccattgaatgaacttataagtatggggaaatggattaaaaatgcaggatgtgaatgcggaactgaatacttaaattttgatgaggaaccagcaTGTTAGATGCAAATttg                                                                                                                          <  2:459220‑M2/17‑1 (MQ=255)
               agtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATttg                                                                                                                          <  1:365083‑M2/17‑1 (MQ=255)
                gtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggatctgaatacttaaattttgatgagcaaccagcaTGTTAGATGAAAATttgt                                                                                                                         <  2:535962‑M2/18‑1 (MQ=255)
                  gttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATttgttg                                                                                                                       <  1:47093‑M2/20‑1 (MQ=255)
                  gttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATttgttg                                                                                                                       <  2:129269‑M2/20‑1 (MQ=255)
                      agtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCg                                                                                                                   <  1:427695‑M2/24‑1 (MQ=255)
                           ctgccccctttcttttatcccttgaatgaacttataagtatggggcaaatgagtaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTgaa                                                                                                              >  1:145442‑M2/112‑140 (MQ=255)
                           ctgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAACTTTGTTGAGCGTTgaa                                                                                                              <  1:363366‑M2/29‑1 (MQ=255)
                              ccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattntgatgagcaaccagcaTGGTAGATGCAAATTTGTTGAGCATTgaagaa                                                                                                           >  1:614391‑M2/109‑140 (MQ=255)
                               cccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTAaagaag                                                                                                          >  1:118959‑M2/108‑140 (MQ=255)
                                   tttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGata                                                                                                      <  1:156977‑M2/37‑1 (MQ=255)
                                   tttctttgatccattgaatggcctgagaagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGata                                                                                                      <  1:163187‑M2/37‑1 (MQ=255)
                                    ttttgttatccattgaatgaacttagaagtattgtgaaaatgattaaaaatgcaggattggaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGatat                                                                                                     <  1:359837‑M2/38‑1 (MQ=255)
                                    ttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGatat                                                                                                     <  1:94671‑M2/38‑1 (MQ=255)
                                    ttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGatat                                                                                                     <  1:641096‑M2/38‑1 (MQ=255)
                                       ttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCa                                                                                                  >  2:252553‑M2/100‑140 (MQ=255)
                                       ttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaacagaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATATGTTGAGCGTTGAAGAAGGATAGCCa                                                                                                  >  2:433211‑M2/100‑140 (MQ=255)
                                        tttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaattttgttttaccaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAg                                                                                                 >  1:345778‑M2/99‑140 (MQ=255)
                                          tatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCGGTa                                                                                               >  1:91321‑M2/97‑140 (MQ=255)
                                              cattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaaatttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCa                                                                                           >  1:265162‑M2/93‑140 (MQ=255)
                                              cattgaatgaacttacaagcattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCa                                                                                           >  1:541617‑M2/93‑140 (MQ=255)
                                              cattgaatgaaattataagtattgggcaaatgattaaaaatgcaggatttgaaagcggaaatgaatacttaaattttgatgagcaacaagcaTGTTAGATGCAAATTTGTTGCGCGTTGAAGAAGGATATACAGTAAACa                                                                                           >  2:176615‑M2/93‑140 (MQ=255)
                                              cattgaatcaacttagaattattaggcaaatgattaaaaatgcagcatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTGGAGCGTTGAAGAAGGATATCCAGTAACCa                                                                                           <  2:149228‑M2/48‑1 (MQ=255)
                                                ttgaatgaacttataagtattgggcaaatgattaaaaatgcagggtttgaatgcggaactgaatacttaaattttgatgaacaaccagcaTGTTAAATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCATTAACCAtt                                                                                         >  1:694921‑M2/91‑140 (MQ=255)
                                                ttgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGAAATCCAGTAACCAtt                                                                                         >  1:25410‑M2/91‑140 (MQ=255)
                                                    atgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAg                                                                                     <  1:131648‑M2/54‑1 (MQ=255)
                                                       aacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAAc                                                                                  >  1:490771‑M2/84‑140 (MQ=255)
                                                       aacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAAc                                                                                  >  1:273809‑M2/84‑140 (MQ=255)
                                                       aacttataagtattgggaaaatgattaaaaatgcaggatttgaatgcggaacggaatacttaaattttgatgagcaaccatcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAAc                                                                                  <  2:684927‑M2/57‑1 (MQ=255)
                                                        acttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACg                                                                                 >  1:273202‑M2/83‑140 (MQ=255)
                                                                   ttgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTCTAGAACGATTACGAACTg                                                                      >  2:47637‑M2/72‑140 (MQ=255)
                                                                   ttgggcaaatgatcaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTg                                                                      <  2:167623‑M2/69‑1 (MQ=255)
                                                                       gcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGa                                                                  >  2:726123‑M2/68‑140 (MQ=255)
                                                                       gcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATATAATGAGCGTTGAAGAAGGATATCCAGTAACAATTATAGAACGGTTACGAACTGCCGa                                                                  >  1:137953‑M2/68‑140 (MQ=255)
                                                                           atgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTCCGAACTGCCAAGGga                                                              >  2:46214‑M2/64‑140 (MQ=255)
                                                                            tgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGATAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGgag                                                             >  1:665115‑M2/63‑140 (MQ=255)
                                                                            tgaatcaaaattcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGgag                                                             <  1:163148‑M2/78‑1 (MQ=255)
                                                                             gattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTAAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCATTAACCATTATAGAACGATTACAAACTAGCGAtggaaa                                                            >  2:414398‑M2/62‑138 (MQ=255)
                                                                              attaaaaatgcaggatttgaatgcggaactgaatacttagattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGaa                                                           <  1:513801‑M2/80‑1 (MQ=255)
                                                                              attaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGccgatgtggaa                                                           >  2:138099‑M2/61‑135 (MQ=255)
                                                                              atcaaaaatgcaggatttgaatgcggaactgaatacttaaattgtgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAATAAGGATATCCAGTAACCATCATAGACCGCTTACTAACTGCCGATGGAGaa                                                           <  2:156410‑M2/80‑1 (MQ=255)
                                                                              aataaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAACGAGATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGaa                                                           <  2:298181‑M2/80‑1 (MQ=255)
                                                                               ttaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAAc                                                          >  1:611905‑M2/60‑140 (MQ=255)
                                                                                taaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATAGCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAAcc                                                         <  1:383969‑M2/82‑1 (MQ=255)
                                                                                     atgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGgtcg                                                    <  2:677921‑M2/87‑1 (MQ=255)
                                                                                        caggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGCACCGGTCGTCt                                                 >  2:184138‑M2/51‑140 (MQ=255)
                                                                                        caggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGACCCGGTCGTCt                                                 >  1:726130‑M2/51‑140 (MQ=255)
                                                                                                gaatgcggaactgaatacttaaattttgatgagcaaccagcaTGGTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTa                                         <  1:376834‑M2/98‑1 (MQ=255)
                                                                                                  atgcggaactgaatacttntattttgatgagcaacctgcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAGTCATTCGAAAACTATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGa                                       <  1:646078‑M2/100‑1 (MQ=255)
                                                                                                     cggaattgaatagttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATCATAGAACGATTACGAACTGCCGAGGGAGAACCGGTCGTCTATTGTTTATATaa                                    <  2:443354‑M2/103‑1 (MQ=255)
                                                                                                        aactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAAt                                 <  2:577508‑M2/106‑1 (MQ=255)
                                                                                                            gaattcttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCt                             <  1:101218‑M2/110‑1 (MQ=255)
                                                                                                             aatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTa                            >  2:393485‑M2/30‑140 (MQ=255)
                                                                                                                 cttaaatttttatgagcaaccagcaTGTTAGATGCAAATTGGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTaaaaa                        <  2:232961‑M2/115‑1 (MQ=255)
                                                                                                                        tttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGACGAAGGCTATCCAGTCACCATTATAGAACGATTACGAACTGATGATGTACAACCGTTCGTCAATTGTTTAGATAAAATTGCTTAAATAGAATTa                 >  1:275559‑M2/19‑140 (MQ=255)
                                                                                                                        tttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTa                 >  2:493041‑M2/19‑140 (MQ=255)
                                                                                                                        tttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTAAGAATTGTCTTAGAAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTa                 >  1:680577‑M2/19‑140 (MQ=255)
                                                                                                                         ctgatggccaacccgcgTGTTAGATGTATATTTGTTTAGCGTTGAAGAATGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTaa                <  2:498291‑M2/123‑1 (MQ=255)
                                                                                                                           gatgagtaacgagcaTGTTAGATGGAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTCCGACCTGTCGAAGGAGAACCGGTCGTCTATTGTTTAGATAAAATAAATAAAAAAGAATTAACa              <  2:545689‑M2/125‑1 (MQ=255)
                                                                                                                           gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAACAGAATTAACa              >  2:428784‑M2/16‑140 (MQ=255)
                                                                                                                           gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACa              <  2:345778‑M2/125‑1 (MQ=255)
                                                                                                                           gatgagcaaacagcaTGTCAGATGCGAAGTGTTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACa              <  2:74862‑M2/125‑1 (MQ=255)
                                                                                                                           aagcagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTGAGCTATATTTAAAATTGATATAAAAGAATTAACa              <  2:666148‑M2/125‑1 (MQ=255)
                                                                                                                                   accagcaTGTTCGATGCACATTTGTTGCGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTAcagg      >  1:661033‑M2/8‑139 (MQ=255)
                                                                                                                                    ccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACagag     >  1:451850‑M2/7‑140 (MQ=255)
                                                                                                                                    ccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAAAATGTACagag     >  1:451950‑M2/7‑140 (MQ=255)
                                                                                                                                     cagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGt    <  1:726123‑M2/135‑1 (MQ=255)
                                                                                                                                       gtATGTTAGTGGCAAATTTGTTGAGCGTTGAAGAAGGATATGCAGTAACCATTACAGATCGATTTCGAACTGCCGATGGAGAACCGGTAGTCTATTGTTTAGATAAAATTGCTAGAAAAGAATTAACATGTACAGAGTAt  <  2:432519/139‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                        
AAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGTAT  >  CP000730/1302833‑1303107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: