BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP000730	1,302,967	Δ4 bp	coding (325‑328/714 nt)	USA300HOU_1209 →	possible GntR family transcriptional regulator

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1302967	1302970	4	82 [1]	[0] 80	USA300HOU_1209	possible GntR family transcriptional regulator

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1302966	1 (0.010)	80 (1.000)	64/276	0.2	99.4%	coding (324/714 nt)	USA300HOU_1209	possible GntR family transcriptional regulator
*	?	CP000730	1302971 =	0 (0.000)	80 (1.000)	64/276	0.2	99.4%	coding (329/714 nt)	USA300HOU_1209	possible GntR family transcriptional regulator

AATTTTGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACA  >  CP000730/1302826‑1303101

aaTTTTGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCA                                                                                                                                         >  1:80902‑M1/1‑141 (MQ=255)

   tttGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCATTCTTTAATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgt                                                                                                                                      >  1:743415‑M1/1‑138 (MQ=255)

       aaGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCaagttcga                                                                                                                                  >  1:513440/1‑135 (MQ=255)

       aaGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttaga                                                                                                                                  >  1:207228‑M1/1‑134 (MQ=255)

        agagGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagat                                                                                                                                 <  1:595276‑M1/141‑9 (MQ=255)

         gagGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatg                                                                                                                                <  2:834412‑M1/141‑10 (MQ=255)

            ttttcaagtgTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaa                                                                                                                             >  2:140918‑M1/5‑129 (MQ=255)

                    tgtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttg                                                                                                                     <  1:232862‑M1/141‑21 (MQ=255)

                     gtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttga                                                                                                                    >  1:488085‑M1/1‑120 (MQ=255)

                     gtTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttga                                                                                                                    >  2:190184‑M1/1‑120 (MQ=255)

                       tAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagc                                                                                                                  <  1:154079‑M1/141‑24 (MQ=255)

                       tAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagc                                                                                                                  <  1:278721‑M1/141‑24 (MQ=255)

                       tAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagc                                                                                                                  <  1:279126‑M1/141‑24 (MQ=255)

                        aaGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcg                                                                                                                 >  1:616308‑M1/1‑117 (MQ=255)

                         aGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgt                                                                                                                <  2:570643‑M1/141‑26 (MQ=255)

                          gTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAATTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaattttgttgagcgtt                                                                                                               >  2:469557‑M1/1‑115 (MQ=255)

                                    ccTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggat                                                                                                     <  1:140918‑M1/141‑37 (MQ=255)

                                       ttctttTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatc                                                                                                  <  1:692813‑M1/141‑40 (MQ=255)

                                          ttttATCCATTGAATGNACTTATAAGTATNGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccag                                                                                               >  1:794404‑M1/1‑99 (MQ=255)

                                           tttATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagt                                                                                              <  1:542125‑M1/141‑44 (MQ=255)

                                            ttATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagta                                                                                             >  2:484592‑M1/1‑97 (MQ=255)

                                               tCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaacc                                                                                          >  2:639134‑M1/1‑94 (MQ=255)

                                                   ttGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccatta                                                                                      >  2:479474‑M1/1‑90 (MQ=255)

                                                     gaatgaaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattata                                                                                    <  2:101989‑M1/141‑54 (MQ=255)

                                                      aatgaaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGCTGAGCAACCAGCAtgttagatgcatatttgtcgagcgttgaagaaggatatccagtaaccattatag                                                                                   <  1:743087‑M1/141‑55 (MQ=255)

                                                       atgaaCTTATAAGTATTGGGCAAATGATTAACACTACAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattataga                                                                                  >  1:242573‑M1/1‑86 (MQ=255)

                                                       atgaaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattataga                                                                                  <  1:665419‑M1/141‑56 (MQ=255)

                                                        tgaaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTGTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaa                                                                                 >  1:819823‑M1/1‑85 (MQ=255)

                                                          aaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacg                                                                               >  1:189492‑M1/1‑83 (MQ=255)

                                                          aaCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacg                                                                               >  2:620188‑M1/1‑83 (MQ=255)

                                                           aCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacga                                                                              >  1:12447‑M1/1‑82 (MQ=255)

                                                           aCTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacga                                                                              >  2:455372‑M1/1‑82 (MQ=255)

                                                            cTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgat                                                                             >  1:541645‑M1/1‑81 (MQ=255)

                                                               ataAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattac                                                                          <  2:374047‑M1/141‑64 (MQ=255)

                                                               ataAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattac                                                                          >  1:858361‑M1/1‑78 (MQ=255)

                                                                taAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacg                                                                         >  1:653511‑M1/1‑77 (MQ=255)

                                                                  aGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaa                                                                       <  2:460348‑M1/141‑67 (MQ=255)

                                                                    tATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgatttcgaact                                                                     <  2:315207‑M1/141‑69 (MQ=255)

                                                                      ttGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgc                                                                   >  2:413513‑M1/1‑71 (MQ=255)

                                                                        gggCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccg                                                                 >  1:482701‑M1/1‑69 (MQ=255)

                                                                         ggCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccga                                                                <  1:778855‑M1/141‑74 (MQ=255)

                                                                          gCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgat                                                               <  1:585994‑M1/141‑75 (MQ=255)

                                                                             aaTGATTAAACATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatgga                                                            <  1:682470‑M1/141‑78 (MQ=255)

                                                                             aaTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatgga                                                            >  1:63700‑M1/1‑64 (MQ=255)

                                                                             aaTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatgga                                                            <  1:225847‑M1/141‑78 (MQ=255)

                                                                             aaTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatgga                                                            <  1:369845‑M1/141‑78 (MQ=255)

                                                                              aTGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggag                                                           >  1:719712‑M1/1‑63 (MQ=255)

                                                                                gATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgtggaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaa                                                         <  1:197400‑M1/141‑81 (MQ=255)

                                                                                 aTTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaac                                                        >  2:147320‑M1/1‑60 (MQ=255)

                                                                                  ttAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaacc                                                       >  1:475347‑M1/1‑59 (MQ=255)

                                                                                   tAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGATCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatttccagtaaccattatagaacgattacgaactgccgatggagaaccg                                                      >  2:433128‑M1/1‑58 (MQ=255)

                                                                                   tAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatttccagtaaccattatagaacgattacgaactgccgatggagaaccg                                                      >  2:527000‑M1/1‑58 (MQ=255)

                                                                                     aaaaTGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggt                                                    >  2:281782‑M1/1‑56 (MQ=255)

                                                                                      aaaTGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtc                                                   <  2:443388‑M1/141‑87 (MQ=255)

                                                                                         tGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtc                                                >  1:323976‑M1/1‑52 (MQ=255)

                                                                                         tGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccaggaaccattatagaacgattacgaactgccgatggagaaccggtcgtc                                                <  2:676644‑M1/141‑90 (MQ=255)

                                                                                          gCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtct                                               >  1:674267‑M1/1‑51 (MQ=255)

                                                                                           cAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgatagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtcta                                              >  1:306941‑M1/1‑50 (MQ=255)

                                                                                              gATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattg                                           <  2:794404‑M1/141‑95 (MQ=255)

                                                                                               aTTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgt                                          <  2:485757‑M1/141‑96 (MQ=255)

                                                                                               aTTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgt                                          <  2:202125‑M1/141‑96 (MQ=255)

                                                                                                  tGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgttta                                       <  2:136704‑M1/141‑99 (MQ=255)

                                                                                                   gAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttag                                      >  2:725756‑M1/1‑42 (MQ=255)

                                                                                                     aTGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagat                                    <  2:811635‑M1/141‑102 (MQ=255)

                                                                                                           aaCTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaatt                              <  1:808488‑M1/141‑108 (MQ=255)

                                                                                                           aaCTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaatt                              <  2:843376‑M1/141‑108 (MQ=255)

                                                                                                             cTGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaaatgc                            <  2:415838‑M1/141‑110 (MQ=255)

                                                                                                              tGAATACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgct                           <  1:336108‑M1/141‑111 (MQ=255)

                                                                                                                aaTACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaa                         >  1:90176‑M1/1‑29 (MQ=255)

                                                                                                                 aTACTTAAATTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaa                        >  2:576279‑M1/1‑28 (MQ=255)

                                                                                                                         aTTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacg                                                                         <  2:244756‑M1/84‑65 (MQ=255)

                                                                                                                         aTTTTGATGAGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacg                                                                         >  1:244756‑M1/1‑20 (MQ=255)

                                                                                                                              gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaactggtcgtgtattgtttagttaaaattgttaaaaaagaattaacat           >  1:173895‑M1/1‑15 (MQ=255)

                                                                                                                              gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacat           >  2:285630‑M1/1‑15 (MQ=255)

                                                                                                                              gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacat           >  2:121322‑M1/1‑15 (MQ=255)

                                                                                                                              gatgaGCAACCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacat           >  1:861242‑M1/1‑15 (MQ=255)

                                                                                                                               atgaGCAACCAGCAtgttagatgcaaagttgttgagcgttgaagaagtatatccagtaaccattatataacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatg          <  2:396775‑M1/141‑128 (MQ=255)

                                                                                                                                     aaCCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacaga    <  1:770038‑M1/141‑134 (MQ=255)

                                                                                                                                     aaCCAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacaga    <  2:37829‑M1/141‑134 (MQ=255)

                                                                                                                                      aCCAGCAtgtgagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtgtagataaaattgctaaaaaagaattaacatgtacagag   <  2:90028‑M1/141‑135 (MQ=255)

                                                                                                                                       ccAGCAtgttagatgcaaatttgttgagcgttgaagaaggatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacagagt  <  1:547994‑M1/141‑136 (MQ=255)

                                                                                                                                       ccAGCAtgttagatgcaaatttgttgagcgttgaagaagcatatccagtaaccattatagaacgattacgaactgccgatggagaaccggtcgtctattgtttagataaaattgctaaaaaagaattaacatgtacagagt  <  1:639134‑M1/141‑136 (MQ=255)

AATTTTGAAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACA  >  CP000730/1302826‑1303101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`