Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP000730	1,302,967	Δ4 bp	coding (325‑328/714 nt)	USA300HOU_1209 →	possible GntR family transcriptional regulator

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1302967	1302970	4	82 [1]	[0] 80	USA300HOU_1209	possible GntR family transcriptional regulator

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1302966	1 (0.010)	80 (1.000)	64/276	0.2	99.4%	coding (324/714 nt)	USA300HOU_1209	possible GntR family transcriptional regulator
	?	CP000730	1302971 =	0 (0.000)					coding (329/714 nt)	USA300HOU_1209	possible GntR family transcriptional regulator

AAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGT  >  CP000730/1302833‑1303105                                                                                                                                           |                                                                                                                                       tttgaagagggcacaagtgttaagtcactgcccccattctttaatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGt                                                                                                                                      >  1:743415‑M2/139‑141 (MQ=255)     aagagggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGa                                                                                                                                  >  1:207228‑M2/135‑141 (MQ=255)      agagggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGAt                                                                                                                                 <  1:595276‑M2/8‑1 (MQ=255)       gagggcacaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATg                                                                                                                                <  2:834412‑M2/9‑1 (MQ=255)          ttttcaagtgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCaa                                                                                                                             >  2:140918‑M2/130‑141 (MQ=255)                  tgttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATttgttg                                                                                                                     <  1:232862‑M2/20‑1 (MQ=255)                   gttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGa                                                                                                                    >  2:190184‑M2/121‑141 (MQ=255)                   gttaagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGa                                                                                                                    >  1:488085‑M2/121‑141 (MQ=255)                     taagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGc                                                                                                                  <  1:279126‑M2/23‑1 (MQ=255)                     taagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGc                                                                                                                  <  1:278721‑M2/23‑1 (MQ=255)                     taagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGc                                                                                                                  <  1:154079‑M2/23‑1 (MQ=255)                      aagtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCg                                                                                                                 >  1:616308‑M2/118‑141 (MQ=255)                       agtcactgccccctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGt                                                                                                                <  2:570643‑M2/25‑1 (MQ=255)                        gtcactgccccctttcttttatccattgaatgaacttataagtattgggcaattgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAATTTTGTTGAGCGtt                                                                                                               >  2:469557‑M2/116‑141 (MQ=255)                                  cctttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGat                                                                                                     <  1:140918‑M2/36‑1 (MQ=255)                                     ttcttttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATc                                                                                                  <  1:692813‑M2/39‑1 (MQ=255)                                        ttttatccattgaatgnacttataagtatngggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAg                                                                                               >  1:794404‑M2/100‑141 (MQ=255)                                         tttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGt                                                                                              <  1:542125‑M2/43‑1 (MQ=255)                                          ttatccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTa                                                                                             >  2:484592‑M2/98‑141 (MQ=255)                                             tccattgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAAcc                                                                                          >  2:639134‑M2/95‑141 (MQ=255)                                                 ttgaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATta                                                                                      >  2:479474‑M2/91‑141 (MQ=255)                                                   gaatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATtata                                                                                    <  2:101989‑M2/53‑1 (MQ=255)                                                    aatgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgctgagcaaccagcaTGTTAGATGCATATTTGTCGAGCGTTGAAGAAGGATATCCAGTAACCATTATAg                                                                                   <  1:743087‑M2/54‑1 (MQ=255)                                                     atgaacttataagtattgggcaaatgattaacactacaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGa                                                                                  >  1:242573‑M2/87‑141 (MQ=255)                                                     atgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGa                                                                                  <  1:665419‑M2/55‑1 (MQ=255)                                                      tgaacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattgtgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGaa                                                                                 >  1:819823‑M2/86‑141 (MQ=255)                                                        aacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACg                                                                               >  2:620188‑M2/84‑141 (MQ=255)                                                        aacttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACg                                                                               >  1:189492‑M2/84‑141 (MQ=255)                                                         acttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGa                                                                              >  1:12447‑M2/83‑141 (MQ=255)                                                         acttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGa                                                                              >  2:455372‑M2/83‑141 (MQ=255)                                                          cttataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGAt                                                                             >  1:541645‑M2/82‑141 (MQ=255)                                                             ataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTAc                                                                          >  1:858361‑M2/79‑141 (MQ=255)                                                             ataagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTAc                                                                          <  2:374047‑M2/63‑1 (MQ=255)                                                              taagtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACg                                                                         >  1:653511‑M2/78‑141 (MQ=255)                                                                agtattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGaa                                                                       <  2:460348‑M2/66‑1 (MQ=255)                                                                  tattgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTTCGAACt                                                                     <  2:315207‑M2/68‑1 (MQ=255)                                                                    ttgggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGc                                                                   >  2:413513‑M2/72‑141 (MQ=255)                                                                      gggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCg                                                                 >  1:482701‑M2/70‑141 (MQ=255)                                                                       ggcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGa                                                                <  1:778855‑M2/73‑1 (MQ=255)                                                                        gcaaatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGAt                                                               <  1:585994‑M2/74‑1 (MQ=255)                                                                           aatgattaaacatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGga                                                            <  1:682470‑M2/77‑1 (MQ=255)                                                                           aatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGga                                                            >  1:63700‑M2/65‑141 (MQ=255)                                                                           aatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGga                                                            <  1:369845‑M2/77‑1 (MQ=255)                                                                           aatgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGga                                                            <  1:225847‑M2/77‑1 (MQ=255)                                                                            atgattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGgag                                                           >  1:719712‑M2/64‑141 (MQ=255)                                                                              gattaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTGGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGaa                                                         <  1:197400‑M2/80‑1 (MQ=255)                                                                               attaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAAc                                                        >  2:147320‑M2/61‑141 (MQ=255)                                                                                ttaaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAAcc                                                       >  1:475347‑M2/60‑141 (MQ=255)                                                                                 taaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgatcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATTTCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCg                                                      >  2:433128‑M2/59‑141 (MQ=255)                                                                                 taaaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATTTCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCg                                                      >  2:527000‑M2/59‑141 (MQ=255)                                                                                   aaaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGgt                                                    >  2:281782‑M2/57‑141 (MQ=255)                                                                                    aaatgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGgtc                                                   <  2:443388‑M2/86‑1 (MQ=255)                                                                                       tgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGgtcgtc                                                >  1:323976‑M2/53‑141 (MQ=255)                                                                                       tgcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGGAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGgtcgtc                                                <  2:676644‑M2/89‑1 (MQ=255)                                                                                        gcaggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCt                                               >  1:674267‑M2/52‑141 (MQ=255)                                                                                         caggatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGATAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTa                                              >  1:306941‑M2/51‑141 (MQ=255)                                                                                            gatttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTg                                           <  2:794404‑M2/94‑1 (MQ=255)                                                                                             atttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGt                                          <  2:485757‑M2/95‑1 (MQ=255)                                                                                             atttgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGt                                          <  2:202125‑M2/95‑1 (MQ=255)                                                                                                tgaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTa                                       <  2:136704‑M2/98‑1 (MQ=255)                                                                                                 gaatgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAg                                      >  2:725756‑M2/43‑141 (MQ=255)                                                                                                   atgcggaactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGAt                                    <  2:811635‑M2/101‑1 (MQ=255)                                                                                                         aactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAAtt                              <  2:843376‑M2/107‑1 (MQ=255)                                                                                                         aactgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAAtt                              <  1:808488‑M2/107‑1 (MQ=255)                                                                                                           ctgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAAATGc                            <  2:415838‑M2/109‑1 (MQ=255)                                                                                                            tgaatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCt                           <  1:336108‑M2/110‑1 (MQ=255)                                                                                                              aatacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTaa                         >  1:90176‑M2/30‑141 (MQ=255)                                                                                                               atacttaaattttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTaaa                        >  2:576279‑M2/29‑141 (MQ=255)                                                                                                                       attttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACg                                                                         <  2:244756‑M2/64‑1 (MQ=255)                                                                                                                       attttgatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACg                                                                         >  1:244756‑M2/21‑84 (MQ=255)                                                                                                                            gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACTGGTCGTGTATTGTTTAGTTAAAATTGTTAAAAAAGAATTAACAt           >  1:173895‑M2/16‑141 (MQ=255)                                                                                                                            gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACAt           >  2:285630‑M2/16‑141 (MQ=255)                                                                                                                            gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACAt           >  1:861242‑M2/16‑141 (MQ=255)                                                                                                                            gatgagcaaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACAt           >  2:121322‑M2/16‑141 (MQ=255)                                                                                                                             atgagcaaccagcaTGTTAGATGCAAAGTTGTTGAGCGTTGAAGAAGTATATCCAGTAACCATTATATAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATg          <  2:396775‑M2/127‑1 (MQ=255)                                                                                                                                   aaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACaga    <  1:770038‑M2/133‑1 (MQ=255)                                                                                                                                   aaccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACaga    <  2:37829‑M2/133‑1 (MQ=255)                                                                                                                                    accagcaTGTGAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTGTAGATAAAATTGCTAAAAAAGAATTAACATGTACagag   <  2:90028‑M2/134‑1 (MQ=255)                                                                                                                                     ccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGt  <  1:547994‑M2/135‑1 (MQ=255)                                                                                                                                     ccagcaTGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGCATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGt  <  1:639134‑M2/135‑1 (MQ=255)                                                                                                                                           |                                                                                                                                       AAGAGGGCACAAGTGTTAAGTCACTGCCCCCTTTCTTTTATCCATTGAATGAACTTATAAGTATTGGGCAAATGATTAAAAATGCAGGATTTGAATGCGGAACTGAATACTTAAATTTTGATGAGCAACCAGCAACTATGTTAGATGCAAATTTGTTGAGCGTTGAAGAAGGATATCCAGTAACCATTATAGAACGATTACGAACTGCCGATGGAGAACCGGTCGTCTATTGTTTAGATAAAATTGCTAAAAAAGAATTAACATGTACAGAGT  >  CP000730/1302833‑1303105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑