New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 408323 = | 77 (1.210) | 3 (0.050) | 3/260 | 10.2 | 3.8% | coding (1869/2229 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑‑ homocysteine S‑methyltransferase |
? | CP000730 | 408388 = | 78 (1.310) | coding (1804/2229 nt) | metE | 5‑methyltetrahydropteroyltriglutamate‑‑ homocysteine S‑methyltransferase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TATTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTCGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/408471‑408323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgtgatATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATCTTGAACGACTTTACGTGGTAAAT > CP000730/408388‑408525 TATTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAG > 2:35117/1‑141 TTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTT > 2:618219/1‑141 TTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTT > 2:152195/1‑141 TTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTT > 2:618188/1‑141 TAGCAGTTGAAGCTGCAGGAATCAAAGTTATCCAAGTGGACGAACCTGCATTACCTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTC < 1:492289/141‑1 TAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTC < 2:416304/141‑1 CTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTCGTGAT > 1:80372/1‑141 CACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTCGTGATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTG > 2:186075/1‑141 AATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTCGTGATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATAC > 1:116926/1‑141 TCTTCAGTTCGTGATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATCTTGAACGACTT < 2:116926/141‑1 GTTCGTGATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATCTTGAACGACTTTACGTG > 2:443941/1‑141 GTTCGTGATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATCTTGAACGACTTTACGTG > 1:95128/1‑141 GATATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATAATGCAAGAATTTACGTGGTAAAT < 2:482021/141‑1 TATTAGCACTTGAAGCTGCAGGAATCAAAGTTATCCAAGTTGACGAACCTGCATTACGTGAAGGCTTACCATTACGCTCTGAATATCACGAACAATATCTTAAAGATGCTGTTTTATCATTTAAACTTGCAACGTCTTCAGTTCGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/408471‑408323 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgtgatATTCAGAGCGTAATGGTAAGCCTTCACGTAATGCAGGTTCGTCAACTTGGATAACTTTGATTCCTGCAGCTTCAAGTGCTAATACTTCTTCGTTGATTGCTAAAGCAATTTGATCTTGAACGACTTTACGTGGTAAAT > CP000730/408388‑408525 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |