New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | = 490618 | 70 (1.100) | 3 (0.050) | 3/262 | 10.3 | 4.3% | coding (219/843 nt) | metQ | ABC superfamily ATP binding cassette transporter, binding protein |
? | CP000730 | = 490649 | 66 (1.100) | coding (250/843 nt) | metQ | ABC superfamily ATP binding cassette transporter, binding protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGGAGAAGGTTAAAGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCAAATGA > CP000730/490512‑490788 | gggAGAAGGTTAAAGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATc > 1:119180/1‑141 (MQ=255) gaAGGTTAAAGAATTAGCTAAAAAAGATGATGTTGATGTGGAGATTAAGCACTTCTCAGATTAGAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAata < 2:668216/141‑1 (MQ=255) gTTAAAGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGAAAAATATaaa < 2:182678/141‑1 (MQ=255) tAAAGAATTAGCTAAAAAAGATGATATTGATGTGGAGCTTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATaaaaa > 1:493602/1‑141 (MQ=255) aaaGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAg > 1:259818/1‑141 (MQ=255) aGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGgc < 2:316741/141‑1 (MQ=255) aaTTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGgcgc < 1:632736/141‑1 (MQ=255) aTTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCa > 2:134064/1‑141 (MQ=255) ttAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCAt > 1:124183/1‑141 (MQ=255) cTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAg > 1:660425/1‑141 (MQ=255) tAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAgg < 2:634015/141‑1 (MQ=255) aaaaaGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGaa > 2:431264/1‑141 (MQ=255) aaaGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACa < 1:495568/141‑1 (MQ=255) gatgatATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAg > 2:329863/1‑141 (MQ=255) gatATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGAtt > 1:274224/1‑141 (MQ=255) tatTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTc > 2:297396/1‑141 (MQ=255) tGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCCAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGc < 1:504246/141‑1 (MQ=255) gATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCa > 1:652978/1‑141 (MQ=255) gtgGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTa > 1:107322/1‑141 (MQ=255) ttAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTacaa < 1:325789/141‑1 (MQ=255) gCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGt > 1:349123/1‑141 (MQ=255) gCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGt < 2:125295/141‑1 (MQ=255) gCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGt > 1:16248/1‑141 (MQ=255) cTTCTCAGATTACAATTTACCGANTAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGtttt > 1:392209/1‑141 (MQ=255) ctcAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGc < 1:329863/141‑1 (MQ=255) cAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTggg > 2:460199/1‑141 (MQ=255) aaTTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGc > 1:305791/1‑141 (MQ=255) aaTTTACCGAAGAGAGCATGAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAATATTCACATAGAGGAGCGAAGATGTCAGCATTAAGTACAACAGTTTTAGCACGGTTGGGc < 2:647305/141‑1 (MQ=255) aTTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCa < 2:439634/141‑1 (MQ=255) aTTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCa > 2:211028/1‑141 (MQ=255) cGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACt > 1:311914/1‑141 (MQ=255) gAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTc < 1:308876/141‑1 (MQ=255) aTAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAg < 1:365227/141‑1 (MQ=255) aTAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAg < 1:181459/141‑1 (MQ=255) tAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTggg < 2:84894/129‑1 (MQ=255) tAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGa > 1:502229/1‑141 (MQ=255) tAAAGCATTAAATGATGGTGATATTGATATGAANGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTggg > 1:84894/1‑129 (MQ=255) aGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATaa < 2:128318/141‑1 (MQ=255) gCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATaaa < 2:200422/141‑1 (MQ=255) cATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATaaaa > 2:82765/1‑141 (MQ=255) ttAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAAtt < 2:606876/141‑1 (MQ=255) tgatgGTGATATTTATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACATTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGa < 1:412713/141‑1 (MQ=255) tgatgGTGATATTGATATGAATGCATTCCAACATTTTGCATATTTAGATAAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGa > 2:94252/1‑141 (MQ=255) tgGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGt < 2:657515/141‑1 (MQ=255) tgGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATAAAAGaaaa < 2:95448/141‑4 (MQ=255) ggTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTc > 1:19365/1‑141 (MQ=255) gatattgatatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCaaa > 2:122658/1‑141 (MQ=255) tattgatatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCaaaaa > 1:260432/1‑141 (MQ=255) attgatatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAg > 1:55181/1‑141 (MQ=255) ttgatatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAgg < 1:165975/141‑1 (MQ=255) gatatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTAAAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGtt > 2:320158/1‑141 (MQ=255) tatGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTaa > 2:290996/1‑141 (MQ=255) aTGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATg > 1:203189/1‑141 (MQ=255) tGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATgg > 2:113818/1‑141 (MQ=255) ttCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCt < 1:512665/141‑1 (MQ=255) aCATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGt < 1:431264/141‑1 (MQ=255) aCATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACGCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGt < 1:297396/141‑1 (MQ=255) ttttGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGt > 1:26729/1‑141 (MQ=255) ttttGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGt < 1:625062/141‑1 (MQ=255) gCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCAtt < 1:197732/141‑1 (MQ=255) gCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCAtt > 1:163786/1‑141 (MQ=255) gCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCAtt > 2:247423/1‑141 (MQ=255) aTTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTcc < 1:454143/141‑1 (MQ=255) ttttAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCaa < 2:564892/141‑1 (MQ=255) ttttAGATCAACATAAAATGGCGCATAAAGGACCAAAGATTCCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCCTTTACTCAGATAAAATTAAAGATGTAAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCaa < 1:203985/141‑1 (MQ=255) aGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCAAatga < 1:679778/141‑1 (MQ=255) aGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCAAatga > 1:141329/1‑141 (MQ=255) aGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATAAAAAAAGTAAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCAAatga < 2:220552/141‑1 (MQ=255) | GGGAGAAGGTTAAAGAATTAGCTAAAAAAGATGATATTGATGTGGAGATTAAGCACTTCTCAGATTACAATTTACCGAATAAAGCATTAAATGATGGTGATATTGATATGAATGCATTCCAACATTTTGCATTTTTAGATCAATATAAAAAGGCGCATAAAGGAACAAAGATTTCAGCATTAAGTACAACAGTTTTAGCACCGTTGGGCATTTACTCAGATAAAATTAAAGATGTCAAAAAGGTTAAAGATGGTGCTAAAGTTGTCATTCCAAATGA > CP000730/490512‑490788 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |