New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 81118087 (0.970)4 (0.050) 4/252 14.4 5.0% intergenic (+22/‑111) nrdF/USA300HOU_0757 ribonucleoside‑diphosphate reductase subunit beta/hypothetical protein
?CP000730 = 811226 73 (0.890)intergenic (+68/‑65) nrdF/USA300HOU_0757 ribonucleoside‑diphosphate reductase subunit beta/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCATTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/811030‑811180
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagaccttcaACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCACC  <  CP000730/811226‑811087
                                                                                                                                                                                                                                                                                                   
ATCATTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAA                                                                                                                                                        <  2:311368/141‑1
ATCATTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAA                                                                                                                                                        <  1:947405/141‑1
   ATTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAG                                                                                                                                                     <  2:178451/141‑1
    TTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGA                                                                                                                                                    <  2:139605/141‑1
      GAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACC                                                                                                                                                  <  2:877934/141‑1
      GAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACC                                                                                                                                                  <  2:673283/141‑1
          ATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCA                                                                                                                                              <  2:772153/141‑1
                                                              TGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGG                                                                                          <  2:854003/141‑1
                                                               GGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGT                                                                                         <  2:548823/141‑1
                                                                  TATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTT                                                                                      <  1:869534/141‑1
                                                                      TATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAA                                                                                  <  1:774559/141‑1
                                                                                                                                            AAAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACAT            <  1:421251/141‑1
                                                                                                                                             AAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATA           >  2:273509/1‑141
                                                                                                                                             AAGACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATA           <  1:301671/141‑1
                                                                                                                                               GACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAAC         <  2:431216/141‑1
                                                                                                                                               GACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAAC         >  2:258740/1‑141
                                                                                                                                               GACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAAC         >  2:885753/1‑141
                                                                                                                                                ACCTTCAACATGTAGGAGACAAGACGAAACTAATCGCTATTTCCCTTTACATGTGAAGGTCTCTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACC        <  2:752030/141‑1
                                                                                                                                                ACCTTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACC        >  2:12468/1‑141
                                                                                                                                                   TTCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATC     >  2:178463/1‑141
                                                                                                                                                    TCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCA    <  1:600034/141‑1
                                                                                                                                                    TCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCA    >  2:840220/1‑141
                                                                                                                                                    TCAACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCA    <  1:541336/141‑1
                                                                                                                                                     CAACATGNAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATATGAATGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAATTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATATATAACCATCAC   <  2:724138/141‑1
                                                                                                                                                      AACATTTAGGAGACAAGACTAAACAAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCACC  <  2:669756/141‑1
                                                                                                                                                      AACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCACC  <  2:957240/141‑1
                                                                                                                                                                                                                                                                                                   
ATCATTGAGAATGCCTTAGATACAACAACTAAAAACCATGACTTCTTCTCAGTAAAAGGTGATGGTTATGTATTAGCATTAAACGTAGAAGCATTACAAGATGATGACTTTGTATTTGACAACAAATAACAATTAAATTAAAAGACCTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/811030‑811180
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagaccttcaACATGTAGGAGACAAGACGAAACGAATCGCTATTTCCCTTTACATGTGAAGGTCTTTTAATTTAATTGTTATTTGTTGTCAAATACAAAGTCATCATCTTGTAATGCTTCTACGTTTAATGCTAATACATAACCATCACC  <  CP000730/811226‑811087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.