New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1292499	88 (0.980)	3 (0.040)	3/244	15.0	3.8%	intergenic (+53/‑333)	infB/rbfA	translation initiation factor IF‑2/ribosome‑binding factor A
	?	CP000730	= 1292522	76 (0.960)					intergenic (+76/‑310)	infB/rbfA	translation initiation factor IF‑2/ribosome‑binding factor A
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGAAT  >  CP000730/1292359‑1292636                                                                                                                                             |                                                                                                                                          tGAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATaaa                                                                                                                                           >  1:89219/1‑141 (MQ=255) tGAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATaaa                                                                                                                                           >  2:872183/1‑141 (MQ=255) tGAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATaaa                                                                                                                                           >  2:267118/1‑141 (MQ=255)  gAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAat                                                                                                                                          >  1:742773/1‑141 (MQ=255)   aaTGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAata                                                                                                                                         >  2:319483/1‑141 (MQ=255)   aaTGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAata                                                                                                                                         <  2:898371/141‑1 (MQ=255)           aTTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACtt                                                                                                                                 >  2:676661/1‑141 (MQ=255)              aCAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACttttt                                                                                                                              >  1:289805/1‑141 (MQ=255)                  ttGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAgt                                                                                                                          <  2:323615/141‑1 (MQ=255)                  ttGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAgt                                                                                                                          >  1:371703/1‑141 (MQ=255)                  ttGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAgt                                                                                                                          >  2:892639/1‑141 (MQ=255)                   tGAAAACTACAATGACCTTAAAGAAGGAGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAgtg                                                                                                                         <  2:578440/141‑1 (MQ=255)                     aaaaCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTc                                                                                                                       <  1:58229/141‑1 (MQ=255)                       aaCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTa                                                                                                                     <  2:437213/141‑1 (MQ=255)                       aaCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTa                                                                                                                     <  2:296171/141‑1 (MQ=255)                       aaCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTa                                                                                                                     <  2:169773/141‑1 (MQ=255)                        aCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTAc                                                                                                                    >  1:190066/1‑141 (MQ=255)                        aCTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTAc                                                                                                                    >  1:963605/1‑141 (MQ=255)                         cTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACt                                                                                                                   >  1:108892/1‑141 (MQ=255)                         cTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACt                                                                                                                   >  2:60308/1‑141 (MQ=255)                         cTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACt                                                                                                                   >  1:288867/1‑141 (MQ=255)                         cTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACt                                                                                                                   <  2:777617/141‑1 (MQ=255)                         cTACAATGACCTTAAAGAAGGCGATGGTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACt                                                                                                                   >  2:86329/1‑141 (MQ=255)                              aTGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTtata                                                                                                              >  1:153657/1‑141 (MQ=255)                              aTGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTtata                                                                                                              >  2:486951/1‑141 (MQ=255)                                 aCCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAggg                                                                                                           <  1:898518/141‑1 (MQ=255)                                   cTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAg                                                                                                         <  2:896022/141‑1 (MQ=255)                                           agGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTg                                                                                                 >  2:137307/1‑141 (MQ=255)                                            ggCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGa                                                                                                >  1:14194/1‑141 (MQ=255)                                            ggCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACGTTATAGGGAGCATATTTGa                                                                                                >  1:515220/1‑141 (MQ=255)                                             gCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGAt                                                                                               >  2:754854/1‑141 (MQ=255)                                               gATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAGAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATAc                                                                                             <  2:508146/141‑1 (MQ=255)                                                  gTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAg                                                                                          <  1:317456/141‑1 (MQ=255)                                                  gTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAg                                                                                          <  1:802790/141‑1 (MQ=255)                                                      tCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCttt                                                                                      <  1:600032/141‑1 (MQ=255)                                                        gAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTg                                                                                    >  2:913094/1‑141 (MQ=255)                                                        gAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTg                                                                                    >  1:304391/1‑141 (MQ=255)                                                         aaGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTgg                                                                                   <  2:643035/141‑1 (MQ=255)                                                         aaGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTgg                                                                                   <  2:606148/141‑1 (MQ=255)                                                         aaGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTgg                                                                                   >  2:791778/1‑141 (MQ=255)                                                         aaGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTgg                                                                                   <  1:595369/141‑1 (MQ=255)                                                            cATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGttt                                                                                <  1:846111/141‑1 (MQ=255)                                                             aTTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAATCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTATGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGtttt                                                                               <  2:248466/141‑1 (MQ=255)                                                             aTTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGCCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGtttt                                                                               <  1:513641/141‑1 (MQ=255)                                                             aTTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGACATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACAAGCTTTTgatgtt                                                                               >  2:762880/1‑136 (MQ=255)                                                                 gAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTttat                                                                           <  1:151421/141‑1 (MQ=255)                                                                  aaaTGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTttatt                                                                          >  1:562945/1‑141 (MQ=255)                                                                  aaaTGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTttatt                                                                          <  1:598611/141‑1 (MQ=255)                                                                  aaaTGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTttatt                                                                          >  2:500430/1‑141 (MQ=255)                                                                  aaaTGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTttatt                                                                          >  1:944566/1‑141 (MQ=255)                                                                    aTGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAg                                                                        >  1:565702/1‑141 (MQ=255)                                                                        ttGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAgg                                                                                                            <  2:861356/101‑1 (MQ=255)                                                                        ttGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAgg                                                                                                            >  1:861356/1‑101 (MQ=255)                                                                        ttGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATa                                                                    >  1:65751/1‑141 (MQ=255)                                                                              ttAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTAc                                                              <  1:573475/141‑1 (MQ=255)                                                                                aaGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCt                                                            >  1:569583/1‑141 (MQ=255)                                                                                 aGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTa                                                           >  2:812887/1‑141 (MQ=255)                                                                                   cGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTTTTTGTATTGGTTACATact                                                         >  2:35186/1‑139 (MQ=255)                                                                                    gTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTa                                                        <  1:123859/141‑1 (MQ=255)                                                                                          taaataaaTTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGtt                                                  <  2:326686/141‑1 (MQ=255)                                                                                            aataaatTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAACTATTGCACTTTTTACGTGTCTACTTTATAGGGAGCATATTTTATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTAc                                                <  1:191455/141‑1 (MQ=255)                                                                                                    aCAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATg                                        <  1:956234/141‑1 (MQ=255)                                                                                                      aaGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGa                                      >  2:84675/1‑141 (MQ=255)                                                                                                      aaGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGa                                      >  2:622863/1‑141 (MQ=255)                                                                                                      aaGCTAAAAGTATAGTTAAGATTGATATGCACCCTATCAACATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGa                                      <  1:840477/141‑1 (MQ=255)                                                                                                       aGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGAc                                     >  2:355649/1‑141 (MQ=255)                                                                                                        gCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACa                                    <  1:842750/141‑1 (MQ=255)                                                                                                        gCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACa                                    <  1:40547/141‑1 (MQ=255)                                                                                                           aaaaGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTGTAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGa                                 >  1:481985/1‑141 (MQ=255)                                                                                                              aGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGAttt                              <  2:264227/141‑1 (MQ=255)                                                                                                              aGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTAAGTTATATGGACATGAttt                              >  1:1568/1‑141 (MQ=255)                                                                                                                  taGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGta                          <  1:579760/141‑1 (MQ=255)                                                                                                                   aGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGtat                         <  2:464152/141‑1 (MQ=255)                                                                                                                        aGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATaaact                    >  2:121128/1‑139 (MQ=255)                                                                                                                        aGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAAt                    <  2:910513/141‑1 (MQ=255)                                                                                                                          aTTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAAttt                  <  2:304391/141‑1 (MQ=255)                                                                                                                          aTTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAAttt                  <  2:18125/141‑1 (MQ=255)                                                                                                                            tGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTTTATANACTTTtg                >  2:723904/1‑141 (MQ=255)                                                                                                                             gATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTtgt               >  1:199815/1‑141 (MQ=255)                                                                                                                             gATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTtgt               >  2:204874/1‑141 (MQ=255)                                                                                                                              atatGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTtgtg              >  2:219590/1‑141 (MQ=255)                                                                                                                              atatGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTtgtg              >  1:400474/1‑141 (MQ=255)                                                                                                                               tatGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTgtgg             >  2:367060/1‑141 (MQ=255)                                                                                                                                atGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTgtggt            >  1:98807/1‑141 (MQ=255)                                                                                                                                  gCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGtggtgg          <  2:89219/141‑1 (MQ=255)                                                                                                                                      ccTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTa      <  1:308467/141‑1 (MQ=255)                                                                                                                                         ataAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGaa   <  1:812887/141‑1 (MQ=255)                                                                                                                                         ataAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGaa   <  2:5811/141‑1 (MQ=255)                                                                                                                                          taAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGAAt  <  1:671107/141‑1 (MQ=255)                                                                                                                                          taAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGAAt  <  1:872183/141‑1 (MQ=255)                                                                                                                                          taAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGAAt  <  1:414282/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                          TGAATGTGGTATTACAATTGAAAACTACAATGACCTTAAAGAAGGCGATGTTATCGAAGCATTTGAAATGGTTGAAATTAAGCGTTAATTAAATAAATTACAAGCTAAAAGTATAGTTAAGATTGATATGCTCCCTATAAATATTGCACTTTTTAAGTGTCTACTTTATAGGGAGCATATTTGATACTAGCTTTTGGTTTTTTATTAGAATAGATTACCTATTAAAAGTTACGTTATATGGACATGATTTTGTATAAAATTTTGTGGTGGCCTAGAAT  >  CP000730/1292359‑1292636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.