| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1954777 | 64 (0.790) | 7 (0.090) | 6/254 | 11.7 | 10.9% | intergenic (‑39/+26) | epiB/epiA | lantibiotic epidermin biosynthesis protein EpiB/lantibiotic epidermin EpiA |
| ? | CP000730 | = 1954783 | 56 (0.750) | intergenic (‑45/+20) | epiB/epiA | lantibiotic epidermin biosynthesis protein EpiB/lantibiotic epidermin EpiA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTAAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1954627‑1954777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaatagagccTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAACAA < CP000730/1954783‑1954646 GTAAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGAC > 1:717557/1‑141GTAAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGAC > 1:717563/1‑141GTAAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTCAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGAC < 1:683592/141‑1 AAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAA > 2:826661/1‑141 AAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAA > 1:152931/1‑141 AAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAA > 2:381757/1‑141 CGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAG < 1:250716/141‑1 CTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAG < 1:782485/141‑1 CTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAG < 2:122511/141‑1 ATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCCTG < 1:696557/141‑1 AATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCCTGAAAG < 1:278537/141‑1 ATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCCTGAAAGG < 2:813816/141‑1 TTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATATTGGTGTTCTAATCATACATATACTTGATGGTTTGTAAATTGTGTTAATTTGTAAGCACCGCACATATTTGAATAGACAAATAGAGCCTGAAAttt < 2:434280/141‑4 ATTGAAAAATTCAACGGCTAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCGTGAAAGGGCTCTATTTGTCTATTCAAATAT < 2:295375/141‑1 ACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTAT > 1:32757/1‑141 AGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCT < 2:32757/141‑1 AAATAGAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATAC < 1:663180/141‑1 AGAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAA > 2:337611/1‑141 AGAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAA < 1:257101/141‑1 GAGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAAC > 2:865647/1‑141 AGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAACA > 1:13363/1‑141 AGCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGGATTTGTATGAGTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAACA > 1:869491/1‑141 GCCTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGCACAA > 2:509110/1‑141 GTAAGTCGCTATATTTAATTTGTTCAGTATTTAAAAATAAATTGAAAAATTCAACTGATAATAAAGGTGTTCTAATCATACAAATACTTGACGGTTCGTAAATAGTGTTCATTTGTAAGCACCTCACATATTTGAATAGACAAATAGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1954627‑1954777‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaatagagccTGAAAGGGCTCTATTTGTCTATTCAAATATGTGAGGTGCTTACAAATGAACACTATTTACGAACCGTCAAGTATTTGTATGATTAGAACACCTTTATTATCAGTTGAATTTTTCAATTTATTTTTAAATACTGAACAA < CP000730/1954783‑1954646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |