New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	494152 =	35 (1.020)	4 (0.130)	4/258	4.8	12.6%	intergenic (+101/+68)	ybbJ/yibF	GNAT family acetyltransferase/hypothetical protein
	?	CP000730	494194 =	23 (0.720)					intergenic (+143/+26)	ybbJ/yibF	GNAT family acetyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAAGCATCTTTACTCATCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACGGCAATACCGCCTAAAATAATA  >  CP000730/494061‑494334                                                                                                                                      |                                                                                                                                             aaaaGCATCTTTACTCATCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTTTTCTTGATCATCGAACAATTTACTATAGTAATAAACGACATAGTGATCAATTTATAGATATCCACAGGATGcttaactttat                                                                                                                                       >  2:339191/1‑138 (MQ=255)        tCTTTACTCATCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATAtt                                                                                                                                >  1:27158/1‑141 (MQ=255)        tCTTTACTCATCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATAtt                                                                                                                                >  1:359710/1‑141 (MQ=255)                 aTCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTTTTTTTTTTTTTCGGACAATTTACTATAGTAAAAAGTGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAATTTATATTGCTAGTTGc                                                                                                                       >  2:12815/1‑141 (MQ=255)                                 aTTAATGATGAATAAAGGTGCTTTTTTTTTTTTTTTATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACt                                                                                                       >  2:241405/1‑141 (MQ=255)                                  ttAATGATGAATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACtc                                                                                                      <  1:131592/141‑1 (MQ=255)                                   tAATGATGAATAAAGGTGCTTTTTGTTTTATATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACtca                                                                                                     >  2:9974/1‑141 (MQ=255)                                       gatgaATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTcatcat                                                                                                 <  2:357538/141‑1 (MQ=255)                                              aaaGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTgcg                                                                                          <  2:216034/141‑1 (MQ=255)                                               aaGGTGCTTTTTTTTTTTTTTTTTCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTgcgc                                                                                         >  2:114873/1‑141 (MQ=255)                                                 ggTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTg                                                                                       <  2:135137/141‑1 (MQ=255)                                                     cTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCga                                                                                   >  1:228238/1‑141 (MQ=255)                                                           gTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGt                                                                             >  2:270628/1‑141 (MQ=255)                                                                tgATCATCAGACAATTTACTTTAGTAAAAGGCGACATAGTGAACAATTGACATATATACACAGGTCGCTTAATTAAAATTAAATTGATAGTTGCGATTAATTGATCGACTCATCATTTTTGCGCTGTCGAGATGGACtttt                                                                        <  2:27158/140‑1 (MQ=255)                                                                    catcGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTttatt                                                                    <  1:105328/141‑1 (MQ=255)                                                                      tcGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTaa                                                                  >  1:44633/1‑141 (MQ=255)                                                                         gACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTaaaaa                                                               <  1:272574/141‑1 (MQ=255)                                                                                  cTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAAt                                                      >  1:202504/1‑141 (MQ=255)                                                                                            aaGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTa                                            <  1:364647/141‑1 (MQ=255)                                                                                                      gTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATAc                                  >  2:196079/1‑141 (MQ=255)                                                                                                                 aCATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACg                       >  1:66220/1‑141 (MQ=255)                                                                                                                  cATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACgg                      <  1:49480/141‑1 (MQ=255)                                                                                                                        cccACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACGGCAATAc                <  1:54090/140‑1 (MQ=255)                                                                                                                                    ttaacttaaGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACGGCAATACCGCCTAAaataa    <  1:48014/141‑1 (MQ=255)                                                                                                                                      aacttaaGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACGGCAATACCGCCTAAAataata  >  2:29889/1‑141 (MQ=255)                                                                                                                                      |                                                                                                                                             AAAAGCATCTTTACTCATCGTCGACCACAACAATTAATGATGAATAAAGGTGCTTTTTGTTATAGATCATCGGACAATTTACTATAGTAAAAAGCGACCTAGTGAACAATTGACATATATCCACAGGTCGCTTAACTTAAGTTATATTGCTAGTTGCGATTAATTGATAGACTCATCATTTTTGCGCTGTCGAGATGGTCTTTTTATTAAAAATGCCGTAATCCAAGCCGTAATCGGAATACTGATTGCAACGGCAATACCGCCTAAAATAATA  >  CP000730/494061‑494334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.