Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2125707	2125728	22	2 [1]	[1] 2	USA300HOU_2006	hypothetical bacteriophage protein

GCATGTATTCTTAGTTATAGAAGATGAAAACCATAATCACAGTGATGCTGTTTTTGGAAAAAGTATATTACTTTCAATTTACGTCGGTGTGAATAAAAAGACTAATTCTAAATCAGGGAAATTTATATACCTTGACAGATCT  >  CP000730/2125566‑2125707                                                                                                                                             |  gCATGTATTCTTAGTTATAGAAGATGAAAACCATAATCACAGTGATGCTGTTTTTGGAAAAAGTATATTACTTTCAATTTACGTCGGTGTGAATAAAAAGACTAATTCTAAATCAGGGAAATTTATATACCTTGACAGATc   <  1:7312/141‑1 (MQ=255)  cATGTATTCTTAGTTATAGAAGAGGAAAACCATAATCACAGTGATGCTGTTTTTGGAAAAAGTATATTACTTTCAATTTACGTCGGTGTGAATAAAAAGACTAATTCTAAATCAGGGAAATTTATATACCTTGACAGATCt  <  1:42760/141‑1 (MQ=255)                                                                                                                                             |  GCATGTATTCTTAGTTATAGAAGATGAAAACCATAATCACAGTGATGCTGTTTTTGGAAAAAGTATATTACTTTCAATTTACGTCGGTGTGAATAAAAAGACTAATTCTAAATCAGGGAAATTTATATACCTTGACAGATCT  >  CP000730/2125566‑2125707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑