Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2125707	2125728	22	2 [1]	[1] 2	USA300HOU_2006	hypothetical bacteriophage protein

TCTGATATCACCAAAATAGAATCAGCTAACGAAAATGATGTAGATTTTTATAATTTACTGAAGAAAGAAAAGGAAATTGTTTATTCCAAAAATATAGTAGATAAATACAATTTAGCGAACTATATAATTTACTACGAAGTTAGT  >  CP000730/2125726‑2125869    |                                                                                                                                             tCTGATATCACCAAAATAGAATCAGCTAACGAAAATGATGTAGATTTTTATACTTTACTGAAGAAAGAAAAGGAAATTGTTTATTCCAAAAATATAGTAGATAAATACAATTTAGCGAACTATATAATTTACTACGAAGtt     <  1:47344/141‑1 (MQ=255)    gATATCACCAAAATAGAATCAGCTAACGAAAATGATGTAGATTTTTATAATTTACTGAAGAAAGAAAAGGAAATTGTTTATTCCAAAAATATAGTAGATAAATACAATTTAGCGAACTATATAATTTACTACGAAGTTAGt  <  1:27223/141‑1 (MQ=255)    |                                                                                                                                             TCTGATATCACCAAAATAGAATCAGCTAACGAAAATGATGTAGATTTTTATAATTTACTGAAGAAAGAAAAGGAAATTGTTTATTCCAAAAATATAGTAGATAAATACAATTTAGCGAACTATATAATTTACTACGAAGTTAGT  >  CP000730/2125726‑2125869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑