| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2085296 = | 182 (1.060) | 9 (0.060) | 6/268 | 12.0 | 5.5% | intergenic (‑558/‑400) | mapW2/USA300HOU_1944 | cell surface protein MapW2/hypothetical protein |
| ? | CP000730 | = 2128343 | 144 (0.930) | intergenic (+57/+1062) | int/hlgB | bacteriophage integrase/possible leukocidin subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 185 total aligned reads displayed.
TTCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAAATTTAAAA > CP000730/2085150‑2085444 | ttCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGCAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGt < 1:245344/149‑1 (MQ=255)ttCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGt < 1:1655121/149‑1 (MQ=255) cACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTAt < 1:522364/149‑1 (MQ=255) ccTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATc < 1:725105/148‑1 (MQ=255) aCTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATc < 1:1105075/149‑1 (MQ=255) aCTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACCGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATc < 1:575341/149‑1 (MQ=255) aaaaaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCaaa < 1:97954/149‑1 (MQ=255) aaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGGTTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTgg < 1:1140066/149‑1 (MQ=255) aGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTCTCCAAACAGga > 2:236203/1‑149 (MQ=255) gTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGga‑g < 1:1337659/149‑1 (MQ=255) ttGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGga‑ga < 2:842774/149‑1 (MQ=255) cAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACGGTATTGTATCCAAACTGGA‑GACtt > 1:1353116/1‑149 (MQ=255) cAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACtt < 2:1187271/149‑1 (MQ=255) accacTTTGATTAACAAATTTATTATTAGTTGGTCCATTTATTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATTTTACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACttt < 2:746738/147‑1 (MQ=255) aaCACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCACACTGGA‑GACttt > 1:706148/1‑149 (MQ=255) aaCACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACttt > 1:1669591/1‑149 (MQ=255) acacTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTTATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACtttt < 2:460598/149‑1 (MQ=255) acacTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACGGACAATAGGGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACtttt < 2:488702/149‑1 (MQ=255) catttgccgtAGCAAATTTAATATTAGTTGGTGCACTTATTGACAATAGGGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGACGTTTGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTa < 2:1102283/140‑1 (MQ=255) cacTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTa < 1:1583102/149‑1 (MQ=255) cacTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTa < 1:468446/149‑1 (MQ=255) aacttgctttcctaaaTTAACTATTAGTGGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTGATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTa < 2:1030606/136‑1 (MQ=255) aTTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GAATTTTAACATaaa < 1:1170791/149‑1 (MQ=255) tAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAAt < 1:1488334/149‑1 (MQ=255) aTTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTa < 2:915403/149‑1 (MQ=255) ttattaGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCAtt < 1:106314/149‑1 (MQ=255) aGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCaaaa > 1:1185737/1‑149 (MQ=255) gTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCaaaaa < 1:1273381/149‑1 (MQ=255) gTTGGTGCACTTACTGACAATAGTAAAAAGGCCGAATCTAAGAAAGCTGATACTCAATTCAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCaaaaa < 2:1559056/149‑1 (MQ=255) ttGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCaaaacg > 2:595586/1‑147 (MQ=255) ttGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCaaaaaa > 2:147517/1‑148 (MQ=255) ttGGTGCACTTACTAACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAAAGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCAATCAAAAAg > 2:955129/1‑149 (MQ=255) tGGTGCACTTACTGACAATAGTGCCACAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGt < 2:108168/149‑1 (MQ=255) tGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGt < 1:446719/149‑1 (MQ=255) cACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAAc < 1:1057894/149‑1 (MQ=255) cTTACTGACATTAGTCCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGGTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAg < 1:165165/149‑1 (MQ=255) cTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATGTGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAg > 1:609261/1‑149 (MQ=255) cTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAg < 2:925994/149‑1 (MQ=255) cTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAg < 2:1529063/149‑1 (MQ=255) tACTGACAATAGGGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCa < 2:243462/149‑1 (MQ=255) tGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataa > 2:1681808/1‑149 (MQ=255) tGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataa > 1:311656/1‑149 (MQ=255) gACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGAACGTTTTGTATCCAAACTGGA‑GACTTTGAACATAAAATTACTTAGCATGCAAAAAGTacaagtaaataat > 1:733513/1‑140 (MQ=255) gACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTGTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCataat > 2:1688506/1‑149 (MQ=255) aaTAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATc > 2:1428235/1‑149 (MQ=255) agaGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCa < 1:656893/147‑1 (MQ=255) gTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAgg > 2:1327800/1‑149 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGCTACTAAATAGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGt > 1:413700/1‑149 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGt > 2:867702/1‑149 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTCAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGt > 2:291534/1‑149 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACAGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGt > 2:1254740/1‑149 (MQ=255) tccAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 1:917566/148‑1 (MQ=255) gtcAAAGCCGAATCTAAGAAATATGATACTGATTTGAAGTTAGTTAGTAATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGC‑GACTTGTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 2:526161/147‑1 (MQ=255) gCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 2:140121/149‑1 (MQ=255) gCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGtt > 2:1508826/1‑149 (MQ=255) ccAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGttt < 2:1437591/149‑1 (MQ=255) cAAAGCCTCATATAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATACCGTTTATATGTTATCTACCGTTTTGTATCCAAACTGGA‑GACTTTTCACATAAAATTACTTATCATTCAGAAAGTAAAACAGCATAATATCAAGGTTta < 2:876063/149‑1 (MQ=255) aaaGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATTACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTtat < 1:814967/149‑1 (MQ=255) ccGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACt > 1:1401691/1‑149 (MQ=255) cGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGTCCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACtt < 2:807541/149‑1 (MQ=255) gAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACttt < 1:19532/149‑1 (MQ=255) aTCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttat > 1:1405937/1‑149 (MQ=255) aTCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttat > 1:795767/1‑149 (MQ=255) tCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatc > 1:1160959/1‑149 (MQ=255) tAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcct < 2:1309801/149‑3 (MQ=255) aatgagtaacatACTATTTTGAAGTTAGTTATTCATAACGTTTATATGTTATCGCCCGTTGTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcatt < 2:257746/139‑1 (MQ=255) aagagtctagttgtttGAGGTTAGGTGGTCACAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcattatca < 2:182896/136‑1 (MQ=255) agaTGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaa > 1:482097/1‑149 (MQ=255) gatgatACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaat > 1:1565563/1‑149 (MQ=255) atACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAataata < 2:791288/149‑1 (MQ=255) tACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAAATACTCATGATTCAAAAAGTAAAACAGCATAATTTCAAGGTTTATAACTTTATCATTATCAATAATAc > 1:400531/1‑149 (MQ=255) tGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATAAAGGTTTATAACTTGATCATTATCAAACATAACTc > 2:402070/1‑149 (MQ=255) gATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCa < 2:578966/149‑1 (MQ=255) tttGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata > 1:600969/1‑149 (MQ=255) tttGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata > 2:1595381/1‑149 (MQ=255) tGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTCTATCATTATCACTAATACTTCAtata > 2:1090138/1‑149 (MQ=255) gAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataa < 1:379125/149‑1 (MQ=255) tCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttta > 2:559433/1‑149 (MQ=255) cATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCACAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCACTAATACCTCATATAAAATAAAAttttag > 2:1316985/1‑149 (MQ=255) cATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtattag > 1:455666/1‑149 (MQ=255) gTTTATATGTTATCGACCGTTTTATATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactt > 1:881854/1‑149 (MQ=255) tataTGTTATCGACCGTTTTGTATCCAAATTGGC‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTGTAACTTTTTCCTTATCAATAATACCTCATATAAACATAAAttttaggtacgtttt > 1:263454/1‑149 (MQ=255) tGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttaggg > 1:485011/1‑149 (MQ=255) gTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttaggga < 2:311656/149‑1 (MQ=255) ttATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttgagggaatttttagggaa > 1:123074/1‑148 (MQ=255) ttATCGACCGTGTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 2:1228458/1‑149 (MQ=255) tATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggact < 1:1428235/149‑1 (MQ=255) tATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggact < 1:891905/149‑1 (MQ=255) tCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAGCATAAAATTACCTATCATTCAAAAAGCAAAACAGCCAAATATCAAGGTTTATAACTTTATCATTAACAACAATCCCTCATATAAAATAAAAGCttagggactttttagggacttt < 2:1137361/149‑1 (MQ=255) tCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTttagggactttttagggacttt > 1:1530819/1‑149 (MQ=255) tCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTttagggactttttagggacttt < 2:354631/149‑1 (MQ=255) aCCTTTTTGTCACCAAACAGGA‑TAGTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCCTATGATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaa < 2:1040562/149‑1 (MQ=255) ccGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaat > 1:77051/1‑149 (MQ=255) ccGTTTTATATCCAAACTGGA‑GACTTTTAACACAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaat > 1:1254554/1‑149 (MQ=255) cGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaatt < 1:1299810/149‑1 (MQ=255) cGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaatt < 2:837234/149‑1 (MQ=255) cGTTGTGTAGCCAAAGTGGACGACTTTT‑TGATGAAATTACTTATCATGCAAAAAGTAAAACAGCATAATATCGAGGTTTAGAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTATGGACtttaaatt < 2:334601/149‑1 (MQ=255) gTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaattt < 2:1372425/149‑1 (MQ=255) gTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACtttaaattt > 2:1158753/1‑149 (MQ=255) tGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAAATTTaaaa > 2:1627729/1‑149 (MQ=255) | TTCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGA‑GACTTTTAACATAAAATTACTTATCATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTAAATTTAAAA > CP000730/2085150‑2085444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |