New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2085296 =182 (1.060)9 (0.060) 6/268 12.0 5.5% intergenic (‑558/‑400) mapW2/USA300HOU_1944 cell surface protein MapW2/hypothetical protein
?CP000730 = 2128343 144 (0.930)intergenic (+57/+1062) int/hlgB bacteriophage integrase/possible leukocidin subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 152 total aligned reads displayed.

AATAACTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAATATCC  >  CP000730/2128199‑2128488
                                                                                                                                                 |                                                                                                                                                 
aaTAACTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTa                                                                                                                                               >  1:857016/1‑149 (MQ=255)
  aaaCTACCACCTTGTATTCTCAATTGTTAGAAGAAACATTTAATGAAGAGGAC‑AAAAAAGCAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATc                                                                                                                                             <  2:347832/148‑1 (MQ=255)
     cTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAACATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCaa                                                                                                                                          >  1:1521048/1‑149 (MQ=255)
     cTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCaa                                                                                                                                          >  2:1106813/1‑149 (MQ=255)
     cTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCaa                                                                                                                                          >  2:1316760/1‑149 (MQ=255)
          tCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCCATGTATCCAAACTgg                                                                                                                                     >  2:76853/1‑149 (MQ=255)
            cGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTgggg                                                                                                                                   <  1:18204/149‑1 (MQ=255)
              tgtATTCTCATTTGTTAGAAGAAAAATGTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGc                                                                                                                                 >  1:1035358/1‑149 (MQ=255)
               gtATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCa                                                                                                                                <  1:297424/149‑1 (MQ=255)
                   tctcATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTATAAGGTTTCTATGTATCCAAACTGGGGGCaaaca                                                                                                                            >  1:1604391/1‑146 (MQ=255)
                   tctcATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAatat                                                                                                                            >  1:323228/1‑149 (MQ=255)
                    ctcATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAAtata                                                                                                                           >  2:9932/1‑149 (MQ=255)
                       aTTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAAc                                                                                                                        <  1:905457/149‑1 (MQ=255)
                       aTTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAAc                                                                                                                        <  2:1101234/149‑1 (MQ=255)
                             tAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCGATATAAAcgcgggg                                                                                                                  >  1:733588/1‑146 (MQ=255)
                             tAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTg                                                                                                                  >  2:181922/1‑149 (MQ=255)
                              agaagaAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGa                                                                                                                 <  2:470012/149‑1 (MQ=255)
                              agaagaAAAAATTAATGAAGAGGAA‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGa                                                                                                                 <  2:658151/149‑1 (MQ=255)
                               gaagaaAAATTTAATGAAGAGGAA‑AAAAAAACAACTAAATTGTTAGAAAGTATGTAATTTAGGAACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGAt                                                                                                                <  1:1163454/149‑1 (MQ=255)
                                aagaaAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTATATGTATCCAAACTGGGGGCAATATAAACGCGCTGAtt                                                                                                               >  1:158801/1‑149 (MQ=255)
                                    aaaaTTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAAGATCAACGCGCTGATTTAAt                                                                                                           >  1:1011946/1‑149 (MQ=255)
                                    aaaaTTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGAGTCTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCATTAGAAACGCACTTCTTTAAt                                                                                                           >  2:927375/1‑149 (MQ=255)
                                        tttAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGAAATATAAACGCGCTGATTTAATCGGa                                                                                                       <  1:291264/149‑1 (MQ=255)
                                        attAATGAAAAAGACAAAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCgg                                                                                                        <  2:37728/148‑1 (MQ=255)
                                           aaTGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACaa                                                                                                    <  1:43911/149‑1 (MQ=255)
                                            aTGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAAt                                                                                                   >  2:158123/1‑149 (MQ=255)
                                               aaGAGGAC‑AAAAAAACAACTTAAATTTTAGAAAGTATGTAATTTAGGGACCCATAAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCGAACTGTGGGCAATATAAACGCGCTGATGTAATCGGACAAcctt                                                                                                >  1:1214634/1‑149 (MQ=255)
                                               aaGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGAGCTGATTTAATTGGCAAAtctt                                                                                                >  1:770520/1‑149 (MQ=255)
                                                agagGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAAtcttc                                                                                               <  2:419205/149‑1 (MQ=255)
                                                aaaacaC‑AAAAAAACAACTAGAATTTTAGAAAGTATGTTTTTCTATGACCCTTGAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGTCAATATAAACGCGCTGATTTAATCGGACAAtcttc                                                                                               <  2:278722/144‑1 (MQ=255)
                                                 gagGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTCATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATTAACGCGCTGATTTAATCGGACAAtcttct                                                                                              <  1:897416/149‑1 (MQ=255)
                                                 gagGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAAtcttct                                                                                              >  2:144785/1‑149 (MQ=255)
                                                 gagGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTACGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAAtcttct                                                                                              <  1:941980/149‑1 (MQ=255)
                                                 gagGAC‑AAAAAAACAACTAAAATTATAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGGTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAAtcttct                                                                                              <  1:1561707/149‑1 (MQ=255)
                                                     aC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAAAATAAACACGCTGATTTAATCGGACAATCTTCTtata                                                                                          >  1:1413607/1‑149 (MQ=255)
                                                         aacatccaacTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGGTTTAATCGGACAATCTTCTTATATTa                                                                                       >  2:718955/7‑149 (MQ=255)
                                                         aaaaaaCAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTa                                                                                       <  2:324250/149‑1 (MQ=255)
                                                         aaaaaaCAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTa                                                                                       >  1:768681/1‑149 (MQ=255)
                                                          aaaaaCAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTaa                                                                                      <  2:1080900/149‑1 (MQ=255)
                                                             aacaacTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTaaaaa                                                                                   <  2:903690/149‑1 (MQ=255)
                                                             aacaacTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATGAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTTTTAGATTaaaaa                                                                                   <  2:631514/149‑1 (MQ=255)
                                                                    aaaaTTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAAATGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTGATATTAAAAATAatgct                                                                            >  1:344055/1‑147 (MQ=255)
                                                                       aTTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGGCTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACACTCTTCTTATATTAACAATAatgatgag                                                                         >  2:1655102/1‑147 (MQ=255)
                                                                       aTTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGtg                                                                         >  2:1630882/1‑148 (MQ=255)
                                                                       aTTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTc                                                                         <  1:1106813/149‑1 (MQ=255)
                                                                       aTTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACCCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTc                                                                         <  1:92156/149‑1 (MQ=255)
                                                                          ttATAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTAGGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTa                                                                      <  2:487082/149‑1 (MQ=255)
                                                                           tAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACGGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTaa                                                                     >  1:1288365/1‑149 (MQ=255)
                                                                                 gTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCa                                                               <  2:1540508/149‑1 (MQ=255)
                                                                                 gTATGTAATTTAGGGACCCATGAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCa                                                               <  2:875179/149‑1 (MQ=255)
                                                                                 agaTGTAATTTGGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTcc                                                               <  2:1148445/147‑2 (MQ=255)
                                                                                   aTGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAAATGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAAt                                                             >  2:90575/1‑149 (MQ=255)
                                                                                       aaTTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAg                                                         <  2:1617189/149‑1 (MQ=255)
                                                                                       aaTTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTAAAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAg                                                         <  1:1371997/149‑1 (MQ=255)
                                                                                         ttgtgggACCCATGCGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCa                                                       <  1:225836/145‑1 (MQ=255)
                                                                                            aGGGACCCATTAGGGACTCCAAACCCAATACATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTAAATCGGACAATCTTATTATACTAACAACAACGATGTCGTAATATTCAATGAAGCAttt                                                    <  2:1266212/149‑1 (MQ=255)
                                                                                             gggACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATCATGATGTCGTAATATTCAATGAAGCATTTg                                                   >  1:1348493/1‑149 (MQ=255)
                                                                                              ggACCCTTTAAGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGa                                                  <  2:375119/149‑1 (MQ=255)
                                                                                              ggACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTGTCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGCAATATTCAATGAAGCATTTGa                                                  >  2:1116571/1‑149 (MQ=255)
                                                                                              ggACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGa                                                  <  1:1457787/149‑1 (MQ=255)
                                                                                              ggACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGa                                                  >  2:553582/1‑149 (MQ=255)
                                                                                              ggACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGCCGTAATATTCAAAGAAGCAtttaa                                                  >  1:36143/1‑147 (MQ=255)
                                                                                                aCCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGCAGCATTTGATa                                                <  2:632996/149‑1 (MQ=255)
                                                                                                aCCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATa                                                >  2:766311/1‑149 (MQ=255)
                                                                                                aCCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATa                                                >  1:1089091/1‑149 (MQ=255)
                                                                                                aCCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATa                                                >  2:1071094/1‑149 (MQ=255)
                                                                                                  ccATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAACTAATGATGTCGTAATATTCAATGAAGCATTTgtacat                                              >  2:654257/1‑144 (MQ=255)
                                                                                                  ccATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAAt                                              <  1:1510486/149‑1 (MQ=255)
                                                                                                  ccATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATATGGTAATATTCAATAAAGCAttgtatagt                                              >  2:1181531/1‑142 (MQ=255)
                                                                                                  ccATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGGTTCTATGTATCCAAACTCGGGGCAATTTAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTAAAAGAAGCATTTGATAAt                                              >  1:167679/1‑149 (MQ=255)
                                                                                                        gggACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAGAAATAATGTTGTCGTAATATTCAATGGAGCATTTGATATTGGTGCa                                        >  1:54471/1‑149 (MQ=255)
                                                                                                        gggACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCa                                        >  1:1525539/1‑149 (MQ=255)
                                                                                                        gggACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCa                                        >  2:1688057/1‑149 (MQ=255)
                                                                                                        gggACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCa                                        >  1:687706/1‑149 (MQ=255)
                                                                                                        gggACTCCAAACCCAATAAATACTCTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCa                                        >  1:859024/1‑149 (MQ=255)
                                                                                                           aCTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCa                                     >  1:1432323/1‑149 (MQ=255)
                                                                                                           aCTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCa                                     >  1:578106/1‑149 (MQ=255)
                                                                                                              ccAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGAc                                  >  2:1436358/1‑149 (MQ=255)
                                                                                                                aaaCCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACaa                                >  2:1262444/1‑149 (MQ=255)
                                                                                                                aaaCCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCACTTGATAATGGTGCACCAGACaa                                >  2:736253/1‑149 (MQ=255)
                                                                                                                aaaCCCAATAAATACTGTTGTTACAAGGTTTCCATGTATCCAAACTGGGGGCAATATAAACGCGCTGATCTAATCGGACAATCTTCTGATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACaa                                >  2:1040753/1‑149 (MQ=255)
                                                                                                                 aaCCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCGTACaaa                               >  1:186169/1‑149 (MQ=255)
                                                                                                                 aaCCCAATAAATACTGTTGTTACAAGGTTTCTATGTACCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTACAAATAATGAAGTCGTAATATTCAATGAAGCATTTGATAATGGTACATCAGACaaa                               >  2:1288251/1‑149 (MQ=255)
                                                                                                                 aaCCCAATAAATACGGTTGTTACAAGGTTTCTATGTACCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGTACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGTTGCATCAGACaaa                               <  2:1335872/149‑1 (MQ=255)
                                                                                                                     cAATAAAGACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAattat                           <  1:1706697/149‑1 (MQ=255)
                                                                                                                       ataaataCTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAAttatta                         <  1:897110/149‑1 (MQ=255)
                                                                                                                           ataCTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTa                     >  1:530043/1‑149 (MQ=255)
                                                                                                                           ataCTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTa                     >  1:636122/1‑149 (MQ=255)
                                                                                                                              cTGTTGTTACAAGGTTTCTATGTATCCAGACTGGGGGCAATATAAACGCGATGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCTATGAAGCATTTGATATTGGTGCATCAGATAAATTATACAGTAAtg                  >  2:259572/1‑149 (MQ=255)
                                                                                                                              cTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAAtg                  >  1:724339/1‑149 (MQ=255)
                                                                                                                               tgttgtTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAAtgt                 <  2:1198731/149‑1 (MQ=255)
                                                                                                                                 ttgttACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGa               >  2:805936/1‑149 (MQ=255)
                                                                                                                                    ttACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGaaaa            >  2:963136/1‑149 (MQ=255)
                                                                                                                                    ttACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTAAAAGAAGCATTTGATAATGGTGCAACAGACAAATTATTAAGTAATGTGaaaa            >  2:1042041/1‑149 (MQ=255)
                                                                                                                                    ttACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATAGTCAATGAAGCATTTGATAATGGTGCATCAGACAAGTTATTAAGAAATGTGaaaa            >  2:1313881/1‑149 (MQ=255)
                                                                                                                                        aaGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAACATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGa        >  1:969562/1‑149 (MQ=255)
                                                                                                                                        aaGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATCTTCAATGAGGCATTTGATAATGGTGCAGCAGACAACTTCTTAAGTAATGTGgaagagga        >  1:1429493/1‑144 (MQ=255)
                                                                                                                                        aaGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAagaaga        >  1:699917/1‑149 (MQ=255)
                                                                                                                                            tttCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAatat    <  2:1009707/149‑1 (MQ=255)
                                                                                                                                            tttCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAatat    <  1:1013412/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
AATAACTACATCCGTGTATTCTCATTTGTTAGAAGAAAAATTTAATGAAGAGGAC‑AAAAAAACAACTAAAATTTTAGAAAGTATGTAATTTAGGGACCCATTAGGGACTCCAAACCCAATAAATACTGTTGTTACAAGGTTTCTATGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGATGTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTGAAAAAAGAATATCC  >  CP000730/2128199‑2128488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.