New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 514456163 (0.950)263 (1.570) 6/288 12.6 61.6% intergenic (+124/‑250) rrs1/rrl1 16S ribosomal RNA/23S ribosomal RNA
?CP000730 514473 = 169 (1.010)intergenic (+141/‑233) rrs1/rrl1 16S ribosomal RNA/23S ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 169 total aligned reads displayed.

CCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACA  >  CP000730/514330‑514615
                                                                                                                                               |                                                                                                                                              
cctcctTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAgcg                                                                                                                                           >  1:682767/1‑149 (MQ=255)
cctcctTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAgcg                                                                                                                                           >  1:1345033/1‑149 (MQ=255)
cctcctTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAgcg                                                                                                                                           >  1:581507/1‑149 (MQ=255)
cctcctTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAgcg                                                                                                                                           <  2:179558/149‑1 (MQ=255)
    ctTTCTAAGGATATATTCGGAAGATCTTCTTCAGAAGATGCGGAATAACGTGGCATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTg                                                                                                                                       >  1:942941/1‑149 (MQ=255)
    ctTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTg                                                                                                                                       <  2:1532595/149‑1 (MQ=255)
    ctTTCTAAGGATAGATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTg                                                                                                                                       <  2:520474/149‑1 (MQ=255)
     tttCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGa                                                                                                                                      >  1:350092/1‑149 (MQ=255)
      ttCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGAc                                                                                                                                     <  1:1389970/149‑1 (MQ=255)
         tAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTaa                                                                                                                                  >  2:841625/1‑149 (MQ=255)
           aGGATATATTCGGAACATCTTCTTCAGGAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTaaaa                                                                                                                                <  2:300127/149‑1 (MQ=255)
            ggATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTaaaaa                                                                                                                               >  1:290775/1‑149 (MQ=255)
             gATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAg                                                                                                                              >  1:1006782/1‑149 (MQ=255)
             gATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAg                                                                                                                              >  1:1541082/1‑149 (MQ=255)
              atatatTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGa                                                                                                                             >  1:402404/1‑149 (MQ=255)
                cgttattccgcATCTTCTGAAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGAGAGCACTTGACTAAAAAGaaa                                                                                                                           >  2:940919/11‑149 (MQ=18)
                 tatTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAAt                                                                                                                          <  2:414645/149‑1 (MQ=255)
                 tatTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAAt                                                                                                                          <  1:419034/149‑1 (MQ=255)
                  atTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAAtt                                                                                                                         <  1:683783/149‑1 (MQ=255)
                  atTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTCGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAAtt                                                                                                                         <  1:1429747/149‑1 (MQ=255)
                   ttCGGAACATCTTCTTCAGAAGATGCGGATCAACGGGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTg                                                                                                                        >  2:371297/1‑149 (MQ=255)
                   ttCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTg                                                                                                                        >  2:1396516/1‑149 (MQ=255)
                    tCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGt                                                                                                                       >  2:12232/1‑149 (MQ=255)
                    tCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGt                                                                                                                       >  1:160264/1‑149 (MQ=255)
                    tCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGt                                                                                                                       >  1:197793/1‑149 (MQ=255)
                       gAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAGAGCAGTATGCGAGCGCTTGACTAGAAAGAATTTGTACa                                                                                                                    >  2:167346/1‑149 (MQ=255)
                         gcATCTTCTGAAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACAtt                                                                                                                  >  2:611948/2‑149 (MQ=255)
                             cctcttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGaaa                                                                                                              <  1:465805/147‑1 (MQ=255)
                              ttcttcAGAAGTTGCAGAATAACGTGACATTTTGGATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGaaaa                                                                                                             <  1:776790/149‑1 (MQ=255)
                              ttcttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGaaaa                                                                                                             <  1:1554166/149‑1 (MQ=255)
                              ttcttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGaaaa                                                                                                             <  1:27788/149‑1 (MQ=255)
                              ttcttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGaaaa                                                                                                             <  2:759885/149‑1 (MQ=255)
                               tcttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAAc                                                                                                            >  1:883785/1‑149 (MQ=255)
                                 ttcAGAAGATGCGGAATAACGTGACATATTGTGTTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGCAATTGTACATTGAAAACTa                                                                                                          >  1:1098244/1‑149 (MQ=255)
                                 ttcAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTa                                                                                                          >  2:1233465/1‑149 (MQ=255)
                                  tcAGAAGATGCGGAATATCGTGACATATTGTATTCAGTTTTGATTGTTTATTTTTCATTCAAATATTGTTTGGTTAAAGTGATAAGGCTGATGTAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAg                                                                                                         <  2:785539/149‑1 (MQ=21)
                                  tcAGAAAATGCGGAATAACGTGACATAGTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATACAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACtcg                                                                                                         <  2:1384556/149‑3 (MQ=255)
                                  taagaagtTGCGGTATAACTGGCCATAATGCTTTCAGTTTTGAATGGTTATTTAACATTCAAAAATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGTAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAg                                                                                                         <  2:1623352/147‑1 (MQ=21)
                                   cAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGa                                                                                                        >  2:988385/1‑149 (MQ=255)
                                     gaagaTGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAta                                                                                                      <  1:1480707/149‑1 (MQ=255)
                                     gaagaTGCGGAATAACGTGACATAATGTATTCAGTTTTGACTGTTCATCTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAta                                                                                                      <  1:1415376/149‑1 (MQ=255)
                                     gaagaTGCGGAATAACGGGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAta                                                                                                      <  1:61512/149‑1 (MQ=255)
                                         aTGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAtaagta                                                                                                  >  1:649487/1‑149 (MQ=255)
                                           gCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAtaagtaag                                                                                                <  1:136363/149‑1 (MQ=255)
                                             ggAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAagtaagta                                                                                              >  1:89618/1‑149 (MQ=255)
                                             ggAATAACATGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAagtaagta                                                                                              >  1:959836/1‑149 (MQ=255)
                                               aaTAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTaaa                                                                                            <  2:354473/149‑1 (MQ=255)
                                               aaTAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTaaa                                                                                            <  2:1023108/149‑1 (MQ=255)
                                                  aaCGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAata                                                                                         <  1:304125/149‑1 (MQ=255)
                                                  aaCGTGACATATTGTATTCAGTTTTGAATGTTTATTTAAAATTCCACTCTTTCTTCATTAAAGTGATATTGCTTATGAAAATAAAGCAGTAGGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAata                                                                                         <  2:1647867/149‑1 (MQ=25)
                                                    cGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAAtata                                                                                       <  2:474572/149‑1 (MQ=255)
                                                       gACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGAGAAGTAAGTAAAATATAGAt                                                                                    >  1:516058/1‑149 (MQ=255)
                                                         cATATTGTATTCAGTTTTGAATGATTATAAAACATTGAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAATTAAAGCATTATTCGAGAGCTAAAATAAAAAGAAATTGTACATTGTAAACTAGAAAAGTAAGTAATATATCGAatt                                                                                  >  2:215491/1‑149 (MQ=18)
                                                            atTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTAc                                                                               >  1:171667/1‑149 (MQ=255)
                                                              tttATTCAGTTTTTAATTTTTATTTAACATTCAAACATTTTTTGGTTAAAGTTATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAACTATAGATTTTACCa                                                                             <  2:886764/147‑1 (MQ=25)
                                                              tGTATTCAGTTTTGAATGTTTATTTAACATTCAAATAGTTTTTGGTTAAAGTGAGATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCa                                                                             <  1:377480/149‑1 (MQ=255)
                                                              tGTATTCAGTTTGGGCTGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATTTTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCa                                                                             <  2:547283/149‑1 (MQ=255)
                                                              tGTAATCAGTGTTTAATTGTTATTTAACATTCAAATATGTGTTGGTTAAAGTGCTATTGCTTATGAAAATAAAGCAGAATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCa                                                                             <  1:1533552/149‑1 (MQ=21)
                                                               gTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCaa                                                                            <  1:557058/149‑1 (MQ=255)
                                                                tATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTACAGTGATATTGCTTATGAACATAAAGCAGTATGCGCGCGCTTGACTCAAAAGCACTTGTACATACAAACATAGATAAGTAAGTACTATATACATTTTACCAAg                                                                           >  2:1510768/1‑149 (MQ=21)
                                                                tATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAg                                                                           >  1:1285843/1‑149 (MQ=255)
                                                                tATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTATAAAATGAAAACTAGATAAGTAAGTAAAATATAAATTTTACCaaa                                                                           >  2:1484843/1‑148 (MQ=255)
                                                                   tCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCaa                                                                        >  1:727016/1‑149 (MQ=255)
                                                                    cgtttttGAACGTTTTTGTGACATTCAAATATTTTTTGGTGAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAAGTGTACATTGAAAACCAGATAAGTAAGTAAAATATAGATTTTACCAAGCaaa                                                                       <  2:737244/146‑1 (MQ=21)
                                                                    cAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCaaa                                                                       >  2:426499/1‑149 (MQ=255)
                                                                    cAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCaaa                                                                       >  2:729734/1‑149 (MQ=255)
                                                                            aaTGTTTCTTTAGAATGCAGTTGTTGTTTGGTTAGAGTGATATTGCTTATGAAAATAAAGTAGTATGCGAGCGATGGACTAAAAAGAAATTGTACATTGAAAAATGGAAAAGTAAGTAAAATATAAATGTTACCAACCAAACACGAgga                                                               >  2:1008029/1‑147 (MQ=12)
                                                                             atttttacttaACATGCAAAGATTTTTTGGTTAGCGTGAAATTGCTTATGAAAATAAAGCAGTATTCTGGCGCTTGTCTAAGAAGAAATTGTACATTGAAAACTATATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGa                                                              <  2:119088/146‑1 (MQ=18)
                                                                             attgttatttaACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGa                                                              <  2:705882/145‑1 (MQ=255)
                                                                             aTGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCTGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGa                                                              <  2:1234412/149‑1 (MQ=255)
                                                                                tttatttaACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATa                                                           >  1:637669/1‑149 (MQ=255)
                                                                                   ttttaACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAag                                                        <  1:113308/148‑1 (MQ=255)
                                                                                       aaCATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGtt                                                    >  1:1715442/1‑149 (MQ=255)
                                                                                       aaCATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGtt                                                    >  1:1664533/1‑149 (MQ=255)
                                                                                         cATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAACACCGAGAGAATAAAGAGgttt                                                  >  2:909043/1‑149 (MQ=255)
                                                                                           ttCAAATATTTTTTTGTTATATTTATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTaa                                                >  2:1227996/1‑149 (MQ=255)
                                                                                                atatTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTGAAACGAACTTCAACATCTACAGCTAGATAAGTAGATAAAGTATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTGAAATAAg                                           >  2:1040166/1‑149 (MQ=18)
                                                                                                atatTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAg                                           >  1:1409208/1‑149 (MQ=255)
                                                                                                  atTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCt                                         <  2:1098244/149‑1 (MQ=255)
                                                                                                  atTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCt                                         <  1:1233465/149‑1 (MQ=255)
                                                                                                  atTTTTTGGTTAAAGGTATATTGCACGAGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCt                                         <  2:1285843/149‑1 (MQ=17)
                                                                                                           ttAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTCGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGGTTTTTAAATAAGCTTGAATTCAt                                >  1:1192540/1‑149 (MQ=255)
                                                                                                              aaGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAg                             <  1:762847/149‑1 (MQ=255)
                                                                                                                gTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGGTAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGaa                           >  2:1166894/1‑149 (MQ=255)
                                                                                                                     atTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAaataat                      <  2:682767/149‑1 (MQ=255)
                                                                                                                        tcTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGc                   <  1:1613355/148‑1 (MQ=255)
                                                                                                                        gCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAGGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGATTTAAATAATCTTGAATTCATAAGAAATAATAGc                   >  2:863494/1‑149 (MQ=255)
                                                                                                                         cTTATGAAAATAAAGCAGTATGCGCGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCt                  >  1:857454/1‑149 (MQ=255)
                                                                                                                            aTGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACGAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAgt               >  1:756394/1‑149 (MQ=255)
                                                                                                                              gAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAgtgt             >  2:1572913/1‑149 (MQ=40)
                                                                                                                              gAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAgtgt             >  1:1024369/1‑149 (MQ=40)
                                                                                                                              gAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATAGTAAATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAgtgt             >  2:407422/1‑149 (MQ=255)
                                                                                                                               aaaaTAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAACATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGtt            >  2:817419/1‑149 (MQ=255)
                                                                                                                               aaaaTAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAGTTATTAAGAAATAATCGCTAGTGtt            >  1:463529/1‑149 (MQ=255)
                                                                                                                                   tAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTcttt        <  1:122355/149‑4 (MQ=25)
                                                                                                                                      aGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGa     >  1:1068457/1‑149 (MQ=33)
                                                                                                                                        cAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAac   >  1:568886/1‑149 (MQ=32)
                                                                                                                                        cAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAac   >  2:1613112/1‑149 (MQ=32)
                                                                                                                                        cAGTATGCGAGCGCTTGACTAAAAAGAAATTGAACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTGACCAAGCAAAACCGAGTGAATAAAAAATTTTAAATAAGCTTGAATTCATAAGAAATAGTCGCTCGTGTTCGAAAGAac   >  2:399380/1‑149 (MQ=11)
                                                                                                                                         aGTATGCGAGCGCTTGACTAAAAAGAAATGGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAaca  <  1:94528/149‑1 (MQ=14)
                                                                                                                                               |                                                                                                                                              
CCTCCTTTCTAAGGATATATTCGGAACATCTTCTTCAGAAGATGCGGAATAACGTGACATATTGTATTCAGTTTTGAATGTTTATTTAACATTCAAATATTTTTTGGTTAAAGTGATATTGCTTATGAAAATAAAGCAGTATGCGAGCGCTTGACTAAAAAGAAATTGTACATTGAAAACTAGATAAGTAAGTAAAATATAGATTTTACCAAGCAAAACCGAGTGAATAAAGAGTTTTAAATAAGCTTGAATTCATAAGAAATAATCGCTAGTGTTCGAAAGAACA  >  CP000730/514330‑514615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.